RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 FEZ1Q99689 392 aa20.62■□□□□ 0.89
LTBP3-208ENST00000527339 KIAA1683Q9H0B3 1180 aa20.62■□□□□ 0.89
LTBP3-208ENST00000527339 MYH4Q9Y623 1939 aa20.61■□□□□ 0.89
LTBP3-208ENST00000527339 MGAMO43451 1857 aa20.61■□□□□ 0.89
LTBP3-208ENST00000527339 GJA8P48165 433 aa20.61■□□□□ 0.89
LTBP3-208ENST00000527339 ICA1Q05084 483 aa20.61■□□□□ 0.89
LTBP3-208ENST00000527339 BMP2KLQ5H9B9 411 aa20.61■□□□□ 0.89
LTBP3-208ENST00000527339 TREML2Q5T2D2 321 aa20.61■□□□□ 0.89
LTBP3-208ENST00000527339 ZNF444Q8N0Y2 327 aaPredicted RBP20.61■□□□□ 0.89
LTBP3-208ENST00000527339 ACER1Q8TDN7 264 aa20.61■□□□□ 0.89
LTBP3-208ENST00000527339 C12orf42Q96LP6 360 aa20.61■□□□□ 0.89
LTBP3-208ENST00000527339 DSCC1Q9BVC3 393 aa20.61■□□□□ 0.89
LTBP3-208ENST00000527339 PNMA3Q9UL41 463 aa20.61■□□□□ 0.89
LTBP3-208ENST00000527339 PRDM1O75626 825 aa20.6■□□□□ 0.89
LTBP3-208ENST00000527339 GJB1P08034 283 aa20.6■□□□□ 0.89
LTBP3-208ENST00000527339 CTDSPL2Q05D32 466 aa20.6■□□□□ 0.89
LTBP3-208ENST00000527339 PRO3102Q9H379 93 aa20.6■□□□□ 0.89
LTBP3-208ENST00000527339 KANSL2Q9H9L4 492 aa20.6■□□□□ 0.89
LTBP3-208ENST00000527339 ARHGEF10LQ9HCE6 1279 aa20.6■□□□□ 0.89
LTBP3-208ENST00000527339 EMILIN3Q9NT22 766 aa20.6■□□□□ 0.89
LTBP3-208ENST00000527339 DOCK3Q8IZD9 2030 aa20.6■□□□□ 0.89
LTBP3-208ENST00000527339 ZYXQ15942 572 aaKnown RBP20.59■□□□□ 0.89
LTBP3-208ENST00000527339 DPF3Q92784 378 aa20.59■□□□□ 0.89
LTBP3-208ENST00000527339 RNF208Q9H0X6 261 aa20.59■□□□□ 0.89
LTBP3-208ENST00000527339 UNC93B1Q9H1C4 597 aa20.59■□□□□ 0.89
LTBP3-208ENST00000527339 IL25Q9H293 177 aa20.59■□□□□ 0.89
LTBP3-208ENST00000527339 SH2D4AQ9H788 454 aa20.59■□□□□ 0.89
LTBP3-208ENST00000527339 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.59■□□□□ 0.89
LTBP3-208ENST00000527339 PLIN4Q96Q06 1357 aa20.59■□□□□ 0.89
LTBP3-208ENST00000527339 A0A1W2PRG0 241 aa20.58■□□□□ 0.89
LTBP3-208ENST00000527339 HOXA7P31268 230 aaPredicted RBP20.58■□□□□ 0.89
LTBP3-208ENST00000527339 CLEC10AQ8IUN9 316 aa20.58■□□□□ 0.89
LTBP3-208ENST00000527339 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.58■□□□□ 0.89
LTBP3-208ENST00000527339 HOXD10P28358 340 aa20.57■□□□□ 0.88
LTBP3-208ENST00000527339 SIAH1Q8IUQ4 282 aa20.57■□□□□ 0.88
LTBP3-208ENST00000527339 SMCR8Q8TEV9 937 aaPredicted RBP20.57■□□□□ 0.88
LTBP3-208ENST00000527339 TMX2Q9Y320 296 aa20.57■□□□□ 0.88
LTBP3-208ENST00000527339 IGKV6D-41A0A0C4DH26 115 aa20.56■□□□□ 0.88
LTBP3-208ENST00000527339 SGSM2O43147 1006 aa20.56■□□□□ 0.88
LTBP3-208ENST00000527339 ORC4O43929 436 aa20.56■□□□□ 0.88
LTBP3-208ENST00000527339 FGRP09769 529 aa20.56■□□□□ 0.88
LTBP3-208ENST00000527339 TSPY3P0CV98 308 aa20.56■□□□□ 0.88
LTBP3-208ENST00000527339 TSPY8P0CW00 308 aa20.56■□□□□ 0.88
LTBP3-208ENST00000527339 EEF2P13639 858 aaKnown RBP20.56■□□□□ 0.88
LTBP3-208ENST00000527339 ELNP15502 786 aa20.56■□□□□ 0.88
LTBP3-208ENST00000527339 IRX3P78415 501 aaPredicted RBP20.56■□□□□ 0.88
LTBP3-208ENST00000527339 NEDD1Q8NHV4 660 aa20.56■□□□□ 0.88
LTBP3-208ENST00000527339 U2AF1L4Q8WU68 220 aaKnown RBP20.56■□□□□ 0.88
LTBP3-208ENST00000527339 ASCC2Q9H1I8 757 aaPredicted RBP20.56■□□□□ 0.88
LTBP3-208ENST00000527339 BIN2Q9UBW5 565 aaPredicted RBP20.56■□□□□ 0.88
LTBP3-208ENST00000527339 CTNNA3Q9UI47 895 aa20.56■□□□□ 0.88
LTBP3-208ENST00000527339 ZNF213O14771 459 aa20.55■□□□□ 0.88
LTBP3-208ENST00000527339 PCP11498 1178 aaKnown RBP20.55■□□□□ 0.88
LTBP3-208ENST00000527339 VCAM1P19320 739 aa20.55■□□□□ 0.88
LTBP3-208ENST00000527339 FLT3LGP49771 235 aa20.55■□□□□ 0.88
LTBP3-208ENST00000527339 FCGRTP55899 365 aa20.55■□□□□ 0.88
LTBP3-208ENST00000527339 HAND2P61296 217 aa20.55■□□□□ 0.88
LTBP3-208ENST00000527339 LPAR1Q92633 364 aa20.55■□□□□ 0.88
LTBP3-208ENST00000527339 NYAP2Q9P242 653 aa20.55■□□□□ 0.88
LTBP3-208ENST00000527339 TSPY2A6NKD2 308 aa20.54■□□□□ 0.88
LTBP3-208ENST00000527339 USP17L15C9J2P7 530 aa20.54■□□□□ 0.88
LTBP3-208ENST00000527339 USP17L13C9JLJ4 530 aa20.54■□□□□ 0.88
LTBP3-208ENST00000527339 USP17L11C9JVI0 530 aa20.54■□□□□ 0.88
LTBP3-208ENST00000527339 USP17L18D6R9N7 530 aa20.54■□□□□ 0.88
LTBP3-208ENST00000527339 USP17L22D6RA61 530 aa20.54■□□□□ 0.88
LTBP3-208ENST00000527339 USP17L17D6RBQ6 530 aa20.54■□□□□ 0.88
LTBP3-208ENST00000527339 USP17L19D6RCP7 530 aa20.54■□□□□ 0.88
LTBP3-208ENST00000527339 USP17L20D6RJB6 530 aa20.54■□□□□ 0.88
LTBP3-208ENST00000527339 GCLCP48506 637 aaPredicted RBP20.54■□□□□ 0.88
LTBP3-208ENST00000527339 TFAP4Q01664 338 aa20.54■□□□□ 0.88
LTBP3-208ENST00000527339 ATP2B2Q01814 1243 aa20.54■□□□□ 0.88
LTBP3-208ENST00000527339 USP17L24Q0WX57 530 aa20.54■□□□□ 0.88
LTBP3-208ENST00000527339 AKNAD1Q5T1N1 836 aa20.54■□□□□ 0.88
LTBP3-208ENST00000527339 NKX2-3Q8TAU0 364 aa20.54■□□□□ 0.88
LTBP3-208ENST00000527339 STAG1Q8WVM7 1258 aa20.54■□□□□ 0.88
LTBP3-208ENST00000527339 RNF41Q9H4P4 317 aaPredicted RBP20.54■□□□□ 0.88
LTBP3-208ENST00000527339 VCPKMTQ9H867 229 aa20.54■□□□□ 0.88
LTBP3-208ENST00000527339 TACC3Q9Y6A5 838 aa20.54■□□□□ 0.88
LTBP3-208ENST00000527339 ADCY3O60266 1144 aa20.53■□□□□ 0.88
LTBP3-208ENST00000527339 IMMTQ16891 758 aaKnown RBP20.53■□□□□ 0.88
LTBP3-208ENST00000527339 FAM47AQ5JRC9 791 aa20.53■□□□□ 0.88
LTBP3-208ENST00000527339 PPP4R3BQ5MIZ7 849 aa20.53■□□□□ 0.88
LTBP3-208ENST00000527339 MFSD6Q6ZSS7 791 aa20.53■□□□□ 0.88
LTBP3-208ENST00000527339 SLAIN1Q8ND83 568 aa20.53■□□□□ 0.88
LTBP3-208ENST00000527339 CEP95Q96GE4 821 aa20.53■□□□□ 0.88
LTBP3-208ENST00000527339 NBPF3Q9H094 633 aa20.53■□□□□ 0.88
LTBP3-208ENST00000527339 GOPCQ9HD26 462 aa20.53■□□□□ 0.88
LTBP3-208ENST00000527339 INCENPQ9NQS7 918 aa20.53■□□□□ 0.88
LTBP3-208ENST00000527339 MTMR4Q9NYA4 1195 aa20.53■□□□□ 0.88
LTBP3-208ENST00000527339 PARP14Q460N5 1801 aa20.53■□□□□ 0.88
LTBP3-208ENST00000527339 RANBP6O60518 1105 aaKnown RBP20.52■□□□□ 0.88
LTBP3-208ENST00000527339 FARP2O94887 1054 aaPredicted RBP20.52■□□□□ 0.88
LTBP3-208ENST00000527339 SGPL1O95470 568 aa20.52■□□□□ 0.88
LTBP3-208ENST00000527339 INHAP05111 366 aa20.52■□□□□ 0.88
LTBP3-208ENST00000527339 CATSPERGQ6ZRH7 1159 aa20.52■□□□□ 0.88
LTBP3-208ENST00000527339 TBC1D10CQ8IV04 446 aa20.52■□□□□ 0.88
LTBP3-208ENST00000527339 GTF3C2Q8WUA4 911 aaPredicted RBP20.52■□□□□ 0.88
LTBP3-208ENST00000527339 RPAP3Q9H6T3 665 aaPredicted RBP20.52■□□□□ 0.88
LTBP3-208ENST00000527339 TOMM22Q9NS69 142 aa20.52■□□□□ 0.88
LTBP3-208ENST00000527339 RLFQ13129 1914 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms