RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 OLFML2BQ68BL8 750 aa19.52■□□□□ 0.72
PTPRU-210ENST00000527027 ARRDC4Q8NCT1 418 aa19.52■□□□□ 0.72
PTPRU-210ENST00000527027 SPATC1LQ9H0A9 340 aa19.52■□□□□ 0.72
PTPRU-210ENST00000527027 POTEB2H3BUK9 544 aa19.51■□□□□ 0.71
PTPRU-210ENST00000527027 FAM109BQ6ICB4 259 aaPredicted RBP19.51■□□□□ 0.71
PTPRU-210ENST00000527027 SHCBP1Q8NEM2 672 aa19.51■□□□□ 0.71
PTPRU-210ENST00000527027 RHPN1Q8TCX5 695 aa19.51■□□□□ 0.71
PTPRU-210ENST00000527027 IL1RAPL2Q9NP60 686 aa19.51■□□□□ 0.71
PTPRU-210ENST00000527027 PRKAG2Q9UGJ0 569 aa19.51■□□□□ 0.71
PTPRU-210ENST00000527027 ERCC3P19447 782 aa19.5■□□□□ 0.71
PTPRU-210ENST00000527027 EVX2Q03828 476 aa19.5■□□□□ 0.71
PTPRU-210ENST00000527027 GJC2Q5T442 439 aaPredicted RBP19.5■□□□□ 0.71
PTPRU-210ENST00000527027 MB21D1Q8N884 522 aa19.5■□□□□ 0.71
PTPRU-210ENST00000527027 TANGO6Q9C0B7 1094 aa19.5■□□□□ 0.71
PTPRU-210ENST00000527027 DCP1AQ9NPI6 582 aaPredicted RBP19.5■□□□□ 0.71
PTPRU-210ENST00000527027 SLC5A4Q9NY91 659 aa19.5■□□□□ 0.71
PTPRU-210ENST00000527027 ZNF532Q9HCE3 1301 aa19.5■□□□□ 0.71
PTPRU-210ENST00000527027 COBLO75128 1261 aa19.49■□□□□ 0.71
PTPRU-210ENST00000527027 DSG3P32926 999 aa19.49■□□□□ 0.71
PTPRU-210ENST00000527027 RTP1P59025 263 aa19.49■□□□□ 0.71
PTPRU-210ENST00000527027 TMEM179Q6ZVK1 233 aa19.49■□□□□ 0.71
PTPRU-210ENST00000527027 CLASRPQ8N2M8 674 aaKnown RBP19.49■□□□□ 0.71
PTPRU-210ENST00000527027 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.49■□□□□ 0.71
PTPRU-210ENST00000527027 SDR42E1Q8WUS8 393 aa19.49■□□□□ 0.71
PTPRU-210ENST00000527027 MROH8Q9H579 483 aa19.49■□□□□ 0.71
PTPRU-210ENST00000527027 SWAP70Q9UH65 585 aa19.49■□□□□ 0.71
PTPRU-210ENST00000527027 UNC80Q8N2C7 3258 aa19.48■□□□□ 0.71
PTPRU-210ENST00000527027 TCRBV5S4A2TA0A5A2 114 aa19.48■□□□□ 0.71
PTPRU-210ENST00000527027 GOLIM4O00461 696 aa19.48■□□□□ 0.71
PTPRU-210ENST00000527027 SEPT4O43236 478 aa19.48■□□□□ 0.71
PTPRU-210ENST00000527027 KIAA1755Q5JYT7 1200 aa19.48■□□□□ 0.71
PTPRU-210ENST00000527027 SLC39A5Q6ZMH5 540 aa19.48■□□□□ 0.71
PTPRU-210ENST00000527027 ABRAQ8N0Z2 381 aa19.48■□□□□ 0.71
PTPRU-210ENST00000527027 ATP11BQ9Y2G3 1177 aa19.48■□□□□ 0.71
PTPRU-210ENST00000527027 KBTBD13C9JR72 458 aa19.47■□□□□ 0.71
PTPRU-210ENST00000527027 CYP2D6P10635 497 aa19.47■□□□□ 0.71
PTPRU-210ENST00000527027 HNRNPUQ00839 825 aaKnown RBP eCLIP19.47■□□□□ 0.71
PTPRU-210ENST00000527027 PLS1Q14651 629 aa19.47■□□□□ 0.71
PTPRU-210ENST00000527027 SIAH1Q8IUQ4 282 aa19.47■□□□□ 0.71
PTPRU-210ENST00000527027 LCORLQ8N3X6 602 aa19.47■□□□□ 0.71
PTPRU-210ENST00000527027 SLC44A5Q8NCS7 719 aa19.47■□□□□ 0.71
PTPRU-210ENST00000527027 DNAJC2Q99543 621 aaKnown RBP19.47■□□□□ 0.71
PTPRU-210ENST00000527027 ARHGEF10LQ9HCE6 1279 aa19.47■□□□□ 0.71
PTPRU-210ENST00000527027 TMX2Q9Y320 296 aa19.47■□□□□ 0.71
PTPRU-210ENST00000527027 FLOT1O75955 427 aa19.46■□□□□ 0.71
PTPRU-210ENST00000527027 ANO1Q5XXA6 986 aa19.46■□□□□ 0.71
PTPRU-210ENST00000527027 NCAPG2Q86XI2 1143 aa19.46■□□□□ 0.71
PTPRU-210ENST00000527027 PANK1Q8TE04 598 aa19.46■□□□□ 0.71
PTPRU-210ENST00000527027 KIF1BPQ96EK5 621 aa19.46■□□□□ 0.71
PTPRU-210ENST00000527027 DYNLL2Q96FJ2 89 aa19.46■□□□□ 0.71
PTPRU-210ENST00000527027 SH2D4AQ9H788 454 aa19.46■□□□□ 0.71
PTPRU-210ENST00000527027 VCPKMTQ9H867 229 aa19.46■□□□□ 0.71
PTPRU-210ENST00000527027 ARMT1Q9H993 441 aa19.46■□□□□ 0.71
PTPRU-210ENST00000527027 IFIT2P09913 472 aaKnown RBP19.45■□□□□ 0.7
PTPRU-210ENST00000527027 PRAMEF19Q5SWL8 479 aa19.45■□□□□ 0.7
PTPRU-210ENST00000527027 SPICE1Q8N0Z3 855 aa19.45■□□□□ 0.7
PTPRU-210ENST00000527027 ATG4CQ96DT6 458 aa19.45■□□□□ 0.7
PTPRU-210ENST00000527027 CCDC17Q96LX7 622 aa19.45■□□□□ 0.7
PTPRU-210ENST00000527027 GUCD1Q96NT3 240 aa19.45■□□□□ 0.7
PTPRU-210ENST00000527027 ATP8A2Q9NTI2 1148 aa19.45■□□□□ 0.7
PTPRU-210ENST00000527027 APBB1O00213 710 aa19.44■□□□□ 0.7
PTPRU-210ENST00000527027 PRKAB2O43741 272 aa19.44■□□□□ 0.7
PTPRU-210ENST00000527027 MYCNP04198 464 aaPredicted RBP19.44■□□□□ 0.7
PTPRU-210ENST00000527027 FCER1AP12319 257 aa19.44■□□□□ 0.7
PTPRU-210ENST00000527027 AKR1B1P15121 316 aa19.44■□□□□ 0.7
PTPRU-210ENST00000527027 ADCYAP1R1P41586 468 aa19.44■□□□□ 0.7
PTPRU-210ENST00000527027 ICA1Q05084 483 aa19.44■□□□□ 0.7
PTPRU-210ENST00000527027 SNX17Q15036 470 aa19.44■□□□□ 0.7
PTPRU-210ENST00000527027 RPAP2Q8IXW5 612 aaPredicted RBP19.44■□□□□ 0.7
PTPRU-210ENST00000527027 MAML3Q96JK9 1138 aa19.44■□□□□ 0.7
PTPRU-210ENST00000527027 FAM161BQ96MY7 647 aa19.44■□□□□ 0.7
PTPRU-210ENST00000527027 FRMPD3Q5JV73 1810 aa19.44■□□□□ 0.7
PTPRU-210ENST00000527027 SLC25A27O95847 323 aa19.43■□□□□ 0.7
PTPRU-210ENST00000527027 LRRC41Q15345 812 aa19.43■□□□□ 0.7
PTPRU-210ENST00000527027 SHHQ15465 462 aa19.43■□□□□ 0.7
PTPRU-210ENST00000527027 CLEC10AQ8IUN9 316 aa19.43■□□□□ 0.7
PTPRU-210ENST00000527027 PRDM5Q9NQX1 630 aaPredicted RBP19.43■□□□□ 0.7
PTPRU-210ENST00000527027 WDR46O15213 610 aaKnown RBP19.42■□□□□ 0.7
PTPRU-210ENST00000527027 MBD4O95243 580 aa19.42■□□□□ 0.7
PTPRU-210ENST00000527027 ADD2P35612 726 aa19.42■□□□□ 0.7
PTPRU-210ENST00000527027 CDK8P49336 464 aa19.42■□□□□ 0.7
PTPRU-210ENST00000527027 TMEM132BQ14DG7 1078 aa19.42■□□□□ 0.7
PTPRU-210ENST00000527027 TRIM60Q495X7 471 aa19.42■□□□□ 0.7
PTPRU-210ENST00000527027 ZNF697Q5TEC3 545 aa19.42■□□□□ 0.7
PTPRU-210ENST00000527027 C12orf60Q5U649 245 aa19.42■□□□□ 0.7
PTPRU-210ENST00000527027 C1orf53Q5VUE5 145 aa19.42■□□□□ 0.7
PTPRU-210ENST00000527027 SAMD1Q6SPF0 538 aaPredicted RBP19.42■□□□□ 0.7
PTPRU-210ENST00000527027 BADQ92934 168 aa19.42■□□□□ 0.7
PTPRU-210ENST00000527027 PAG1Q9NWQ8 432 aa19.42■□□□□ 0.7
PTPRU-210ENST00000527027 NRBP1Q9UHY1 535 aa19.42■□□□□ 0.7
PTPRU-210ENST00000527027 ADAMTS5Q9UNA0 930 aa19.42■□□□□ 0.7
PTPRU-210ENST00000527027 ZNF236Q9UL36 1845 aa19.41■□□□□ 0.7
PTPRU-210ENST00000527027 USP17L12C9JPN9 530 aa19.41■□□□□ 0.7
PTPRU-210ENST00000527027 USP17L21D6R901 530 aa19.41■□□□□ 0.7
PTPRU-210ENST00000527027 RAB11FIP3O75154 756 aa19.41■□□□□ 0.7
PTPRU-210ENST00000527027 HMMRO75330 724 aa19.41■□□□□ 0.7
PTPRU-210ENST00000527027 MS4A1P11836 297 aa19.41■□□□□ 0.7
PTPRU-210ENST00000527027 SLFNL1Q499Z3 407 aa19.41■□□□□ 0.7
PTPRU-210ENST00000527027 FAM47AQ5JRC9 791 aa19.41■□□□□ 0.7
PTPRU-210ENST00000527027 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms