RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 SYCP1Q15431 976 aa20.06■□□□□ 0.8
USH1C-205ENST00000527020 SH3RF3Q8TEJ3 882 aaPredicted RBP20.06■□□□□ 0.8
USH1C-205ENST00000527020 ANKIB1Q9P2G1 1089 aa20.06■□□□□ 0.8
USH1C-205ENST00000527020 LDHBP07195 334 aaKnown RBP20.05■□□□□ 0.8
USH1C-205ENST00000527020 GOLGA8FQ08AF8 430 aa20.05■□□□□ 0.8
USH1C-205ENST00000527020 GOLGA8DPQ0D2H9 430 aa20.05■□□□□ 0.8
USH1C-205ENST00000527020 PTGDRQ13258 359 aa20.05■□□□□ 0.8
USH1C-205ENST00000527020 DYNLL2Q96FJ2 89 aa20.05■□□□□ 0.8
USH1C-205ENST00000527020 PAGE5Q96GU1 130 aa20.05■□□□□ 0.8
USH1C-205ENST00000527020 ARID3AQ99856 593 aa20.05■□□□□ 0.8
USH1C-205ENST00000527020 USP21Q9UK80 565 aa20.05■□□□□ 0.8
USH1C-205ENST00000527020 LEMD3Q9Y2U8 911 aa20.05■□□□□ 0.8
USH1C-205ENST00000527020 ROBO3Q96MS0 1386 aa20.05■□□□□ 0.8
USH1C-205ENST00000527020 RFC4P35249 363 aa20.05■□□□□ 0.8
USH1C-205ENST00000527020 PLCD1P51178 756 aa20.05■□□□□ 0.8
USH1C-205ENST00000527020 TFAP4Q01664 338 aa20.05■□□□□ 0.8
USH1C-205ENST00000527020 TBX2Q13207 712 aaPredicted RBP20.05■□□□□ 0.8
USH1C-205ENST00000527020 NAA30Q147X3 362 aaPredicted RBP20.05■□□□□ 0.8
USH1C-205ENST00000527020 WDR66Q8TBY9 1149 aa20.05■□□□□ 0.8
USH1C-205ENST00000527020 DACH1Q9UI36 760 aa20.05■□□□□ 0.8
USH1C-205ENST00000527020 CASP1P29466 404 aa20.04■□□□□ 0.8
USH1C-205ENST00000527020 DIXDC1Q155Q3 683 aa20.04■□□□□ 0.8
USH1C-205ENST00000527020 GPR101Q96P66 508 aaPredicted RBP20.04■□□□□ 0.8
USH1C-205ENST00000527020 TOP1P11387 765 aaKnown RBP20.04■□□□□ 0.8
USH1C-205ENST00000527020 AFMP43652 599 aa20.04■□□□□ 0.8
USH1C-205ENST00000527020 NLRP5P59047 1200 aa20.04■□□□□ 0.8
USH1C-205ENST00000527020 TRAPPC3LQ5T215 181 aa20.04■□□□□ 0.8
USH1C-205ENST00000527020 PIK3AP1Q6ZUJ8 805 aa20.04■□□□□ 0.8
USH1C-205ENST00000527020 TMEM139Q8IV31 216 aa20.04■□□□□ 0.8
USH1C-205ENST00000527020 ANKS1AQ92625 1134 aa20.04■□□□□ 0.8
USH1C-205ENST00000527020 CCDC94Q9BW85 323 aaPredicted RBP20.04■□□□□ 0.8
USH1C-205ENST00000527020 VWA3AA6NCI4 1184 aa20.03■□□□□ 0.8
USH1C-205ENST00000527020 NPHP1O15259 732 aa20.03■□□□□ 0.8
USH1C-205ENST00000527020 CD44P16070 742 aaKnown RBP20.03■□□□□ 0.8
USH1C-205ENST00000527020 USP5P45974 858 aa20.03■□□□□ 0.8
USH1C-205ENST00000527020 XDHP47989 1333 aa20.03■□□□□ 0.8
USH1C-205ENST00000527020 DPYDQ12882 1025 aa20.03■□□□□ 0.8
USH1C-205ENST00000527020 IL17AQ16552 155 aa20.03■□□□□ 0.8
USH1C-205ENST00000527020 FAM196AQ6ZSG2 479 aa20.03■□□□□ 0.8
USH1C-205ENST00000527020 UBR3Q6ZT12 1888 aa20.03■□□□□ 0.8
USH1C-205ENST00000527020 DGKHQ86XP1 1220 aa20.03■□□□□ 0.8
USH1C-205ENST00000527020 SAMSN1Q9NSI8 373 aaKnown RBP20.03■□□□□ 0.8
USH1C-205ENST00000527020 DDX60LQ5H9U9 1706 aaKnown RBP20.03■□□□□ 0.8
USH1C-205ENST00000527020 KIF2AO00139 706 aaPredicted RBP20.02■□□□□ 0.8
USH1C-205ENST00000527020 ERCC5P28715 1186 aaPredicted RBP20.02■□□□□ 0.8
USH1C-205ENST00000527020 STAG2Q8N3U4 1231 aa20.02■□□□□ 0.8
USH1C-205ENST00000527020 CNBD1Q8NA66 436 aa20.02■□□□□ 0.8
USH1C-205ENST00000527020 KIF18AQ8NI77 898 aa20.02■□□□□ 0.8
USH1C-205ENST00000527020 KAT14Q9H8E8 782 aa20.02■□□□□ 0.8
USH1C-205ENST00000527020 IGSF3O75054 1194 aa20.02■□□□□ 0.8
USH1C-205ENST00000527020 KIF5BP33176 963 aa20.02■□□□□ 0.8
USH1C-205ENST00000527020 TRAPPC10P48553 1259 aa20.02■□□□□ 0.8
USH1C-205ENST00000527020 PPP4CP60510 307 aa20.02■□□□□ 0.8
USH1C-205ENST00000527020 E2F4Q16254 413 aa20.02■□□□□ 0.8
USH1C-205ENST00000527020 SLC35G1Q2M3R5 365 aa20.02■□□□□ 0.8
USH1C-205ENST00000527020 PDCL2Q8N4E4 241 aa20.02■□□□□ 0.8
USH1C-205ENST00000527020 PNMA1Q8ND90 353 aa20.02■□□□□ 0.8
USH1C-205ENST00000527020 FAM205AQ6ZU69 1335 aa20.01■□□□□ 0.79
USH1C-205ENST00000527020 NRDCO43847 1150 aa20.01■□□□□ 0.79
USH1C-205ENST00000527020 CUL4BQ13620 913 aa20.01■□□□□ 0.79
USH1C-205ENST00000527020 AEBP2Q6ZN18 517 aaPredicted RBP20.01■□□□□ 0.79
USH1C-205ENST00000527020 C15orf52Q6ZUT6 534 aaKnown RBP20.01■□□□□ 0.79
USH1C-205ENST00000527020 USP17L3A6NCW0 530 aa20.01■□□□□ 0.79
USH1C-205ENST00000527020 USP17L4A6NCW7 530 aa20.01■□□□□ 0.79
USH1C-205ENST00000527020 GRM4Q14833 912 aa20.01■□□□□ 0.79
USH1C-205ENST00000527020 GLIPR1L2Q4G1C9 344 aa20.01■□□□□ 0.79
USH1C-205ENST00000527020 PRR5LQ6MZQ0 368 aa20.01■□□□□ 0.79
USH1C-205ENST00000527020 USP17L1Q7RTZ2 530 aa20.01■□□□□ 0.79
USH1C-205ENST00000527020 APTXQ7Z2E3 356 aaKnown RBP20.01■□□□□ 0.79
USH1C-205ENST00000527020 GPKOWQ92917 476 aaPredicted RBP eCLIP20.01■□□□□ 0.79
USH1C-205ENST00000527020 LRRC4BQ9NT99 713 aa20.01■□□□□ 0.79
USH1C-205ENST00000527020 MAD2L2Q9UI95 211 aa20.01■□□□□ 0.79
USH1C-205ENST00000527020 UBAP1LF5GYI3 381 aa20■□□□□ 0.79
USH1C-205ENST00000527020 GPSM2P81274 684 aa20■□□□□ 0.79
USH1C-205ENST00000527020 TYW1BQ6NUM6 668 aa20■□□□□ 0.79
USH1C-205ENST00000527020 C4orf32Q8N8J7 132 aa20■□□□□ 0.79
USH1C-205ENST00000527020 SLC44A5Q8NCS7 719 aa20■□□□□ 0.79
USH1C-205ENST00000527020 TGFBRAP1Q8WUH2 860 aa20■□□□□ 0.79
USH1C-205ENST00000527020 ZNF215Q9UL58 517 aaPredicted RBP20■□□□□ 0.79
USH1C-205ENST00000527020 CDK11BP21127 795 aaKnown RBP20■□□□□ 0.79
USH1C-205ENST00000527020 MCM7P33993 719 aa20■□□□□ 0.79
USH1C-205ENST00000527020 NT5C2P49902 561 aa20■□□□□ 0.79
USH1C-205ENST00000527020 GSTO1P78417 241 aa20■□□□□ 0.79
USH1C-205ENST00000527020 CT47A1Q5JQC4 288 aaPredicted RBP20■□□□□ 0.79
USH1C-205ENST00000527020 ZNF804AQ7Z570 1209 aa20■□□□□ 0.79
USH1C-205ENST00000527020 GSDMAQ96QA5 445 aa20■□□□□ 0.79
USH1C-205ENST00000527020 RTFDC1Q9BY42 306 aaPredicted RBP20■□□□□ 0.79
USH1C-205ENST00000527020 M0R2N6 131 aa19.99■□□□□ 0.79
USH1C-205ENST00000527020 NR1I3Q14994 352 aa19.99■□□□□ 0.79
USH1C-205ENST00000527020 PPP4R3BQ5MIZ7 849 aa19.99■□□□□ 0.79
USH1C-205ENST00000527020 PDXDC2PQ6P474 469 aa19.99■□□□□ 0.79
USH1C-205ENST00000527020 BLIDQ8IZY5 108 aa19.99■□□□□ 0.79
USH1C-205ENST00000527020 CCDC34Q96HJ3 373 aa19.99■□□□□ 0.79
USH1C-205ENST00000527020 SH3GLB2Q9NR46 395 aa19.99■□□□□ 0.79
USH1C-205ENST00000527020 TCP11L1Q9NUJ3 509 aa19.99■□□□□ 0.79
USH1C-205ENST00000527020 PPP1R3GB7ZBB8 358 aa19.98■□□□□ 0.79
USH1C-205ENST00000527020 CALML3P27482 149 aa19.98■□□□□ 0.79
USH1C-205ENST00000527020 SPECC1LQ69YQ0 1117 aa19.98■□□□□ 0.79
USH1C-205ENST00000527020 SYT10Q6XYQ8 523 aa19.98■□□□□ 0.79
USH1C-205ENST00000527020 SMYD4Q8IYR2 804 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms