RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 CEP120Q8N960 986 aa11.18□□□□□ -0.62
USP35-201ENST00000526425 LINC00301Q8NCQ3 95 aa11.18□□□□□ -0.62
USP35-201ENST00000526425 ZNF804BA4D1E1 1349 aa11.18□□□□□ -0.62
USP35-201ENST00000526425 NWD2Q9ULI1 1742 aa11.18□□□□□ -0.62
USP35-201ENST00000526425 PPP1R12AO14974 1030 aaPredicted RBP11.18□□□□□ -0.62
USP35-201ENST00000526425 TPM3P06753 285 aa11.18□□□□□ -0.62
USP35-201ENST00000526425 MCM7P33993 719 aa11.18□□□□□ -0.62
USP35-201ENST00000526425 LIG3P49916 1009 aa11.18□□□□□ -0.62
USP35-201ENST00000526425 ARID5BQ14865 1188 aa11.18□□□□□ -0.62
USP35-201ENST00000526425 SLC51AQ86UW1 340 aa11.18□□□□□ -0.62
USP35-201ENST00000526425 GRAMD1CQ8IYS0 662 aa11.18□□□□□ -0.62
USP35-201ENST00000526425 ARGLU1Q9NWB6 273 aaPredicted RBP11.18□□□□□ -0.62
USP35-201ENST00000526425 HPS5Q9UPZ3 1129 aa11.18□□□□□ -0.62
USP35-201ENST00000526425 ITGB4P16144 1822 aa11.18□□□□□ -0.62
USP35-201ENST00000526425 CTIFO43310 598 aaKnown RBP11.17□□□□□ -0.62
USP35-201ENST00000526425 COBLO75128 1261 aa11.17□□□□□ -0.62
USP35-201ENST00000526425 ZNF75DP51815 510 aa11.17□□□□□ -0.62
USP35-201ENST00000526425 MECOMQ03112 1051 aa11.17□□□□□ -0.62
USP35-201ENST00000526425 DPCR1Q3MIW9 517 aa11.17□□□□□ -0.62
USP35-201ENST00000526425 HEATR3Q7Z4Q2 680 aa11.17□□□□□ -0.62
USP35-201ENST00000526425 FAM84BQ96KN1 310 aaPredicted RBP11.17□□□□□ -0.62
USP35-201ENST00000526425 EIF3CLB5ME19 914 aaKnown RBP11.17□□□□□ -0.62
USP35-201ENST00000526425 GOLGA8HP0CJ92 632 aa11.17□□□□□ -0.62
USP35-201ENST00000526425 TFAP4Q01664 338 aa11.17□□□□□ -0.62
USP35-201ENST00000526425 ZNF804AQ7Z570 1209 aa11.17□□□□□ -0.62
USP35-201ENST00000526425 ADGRA1Q86SQ6 560 aa11.17□□□□□ -0.62
USP35-201ENST00000526425 KIRREL3Q8IZU9 778 aa11.17□□□□□ -0.62
USP35-201ENST00000526425 FLAD1Q8NFF5 587 aa11.17□□□□□ -0.62
USP35-201ENST00000526425 EIF3CQ99613 913 aaKnown RBP11.17□□□□□ -0.62
USP35-201ENST00000526425 LY9Q9HBG7 655 aa11.17□□□□□ -0.62
USP35-201ENST00000526425 ABCC12Q96J65 1359 aa11.17□□□□□ -0.62
USP35-201ENST00000526425 ATRNO75882 1429 aa11.17□□□□□ -0.62
USP35-201ENST00000526425 VWA3AA6NCI4 1184 aa11.17□□□□□ -0.62
USP35-201ENST00000526425 KIF1CO43896 1103 aaKnown RBP11.17□□□□□ -0.62
USP35-201ENST00000526425 ADALQ6DHV7 355 aa11.17□□□□□ -0.62
USP35-201ENST00000526425 TRMT44Q8IYL2 757 aaKnown RBP11.17□□□□□ -0.62
USP35-201ENST00000526425 AP5Z1O43299 807 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 GRAPQ13588 217 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 SLC10A5Q5PT55 438 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 PRR5LQ6MZQ0 368 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 TXNRD3Q86VQ6 643 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 TMTC2Q8N394 836 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 VGLL2Q8N8G2 317 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 GRAPLQ8TC17 118 aaPredicted RBP11.16□□□□□ -0.62
USP35-201ENST00000526425 CPVLQ9H3G5 476 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 KCNH3Q9ULD8 1083 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 PLEKHA8P1O95397 391 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 SKILP12757 684 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 EVX2Q03828 476 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 SPTY2D1Q68D10 685 aaPredicted RBP11.16□□□□□ -0.62
USP35-201ENST00000526425 PIK3AP1Q6ZUJ8 805 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 SLC44A5Q8NCS7 719 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 OXER1Q8TDS5 423 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 PPM1EQ8WY54 764 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 UBXN4Q92575 508 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 GPKOWQ92917 476 aaPredicted RBP eCLIP11.16□□□□□ -0.62
USP35-201ENST00000526425 PAIP2Q9BPZ3 127 aaKnown RBP11.16□□□□□ -0.62
USP35-201ENST00000526425 STK32BQ9NY57 414 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 PPP1R1BQ9UD71 204 aaPredicted RBP11.16□□□□□ -0.62
USP35-201ENST00000526425 GGA1Q9UJY5 639 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 TRIM75PA6NK02 468 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 BAG3O95817 575 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 GYS1P13807 737 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 PAX7P23759 505 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 RTEL1Q9NZ71 1219 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 MAPK8IP1Q9UQF2 711 aa11.16□□□□□ -0.62
USP35-201ENST00000526425 UBR2Q8IWV8 1755 aa11.15□□□□□ -0.62
USP35-201ENST00000526425 RGL2O15211 777 aa11.15□□□□□ -0.62
USP35-201ENST00000526425 FOXP2O15409 715 aa11.15□□□□□ -0.62
USP35-201ENST00000526425 SKAP2O75563 359 aaPredicted RBP11.15□□□□□ -0.62
USP35-201ENST00000526425 AP1ARQ63HQ0 302 aa11.15□□□□□ -0.62
USP35-201ENST00000526425 KRI1Q8N9T8 703 aaKnown RBP11.15□□□□□ -0.62
USP35-201ENST00000526425 RASGRP4Q8TDF6 673 aa11.15□□□□□ -0.62
USP35-201ENST00000526425 ZSCAN10Q96SZ4 725 aaPredicted RBP11.15□□□□□ -0.62
USP35-201ENST00000526425 ALDH8A1Q9H2A2 487 aaPredicted RBP11.15□□□□□ -0.62
USP35-201ENST00000526425 VPS18Q9P253 973 aa11.15□□□□□ -0.62
USP35-201ENST00000526425 PAXBP1Q9Y5B6 917 aa11.15□□□□□ -0.62
USP35-201ENST00000526425 RIC1Q4ADV7 1423 aa11.15□□□□□ -0.62
USP35-201ENST00000526425 FAM205CA6NFA0 338 aa11.15□□□□□ -0.62
USP35-201ENST00000526425 DEXIO95424 95 aa11.15□□□□□ -0.62
USP35-201ENST00000526425 FGFR2P21802 821 aa11.15□□□□□ -0.62
USP35-201ENST00000526425 SFPQP23246 707 aaKnown RBP eCLIP11.15□□□□□ -0.62
USP35-201ENST00000526425 AMIGO3Q86WK7 504 aa11.15□□□□□ -0.62
USP35-201ENST00000526425 NOSTRINQ8IVI9 506 aa11.15□□□□□ -0.62
USP35-201ENST00000526425 TEX11Q8IYF3 940 aa11.15□□□□□ -0.62
USP35-201ENST00000526425 KIAA1468Q9P260 1216 aa11.15□□□□□ -0.62
USP35-201ENST00000526425 SHANK3Q9BYB0 1731 aa11.15□□□□□ -0.62
USP35-201ENST00000526425 CCDC194A0A1B0GVG4 234 aa11.15□□□□□ -0.63
USP35-201ENST00000526425 MMP10P09238 476 aa11.15□□□□□ -0.63
USP35-201ENST00000526425 CDC25AP30304 524 aa11.15□□□□□ -0.63
USP35-201ENST00000526425 MCM6Q14566 821 aa11.15□□□□□ -0.63
USP35-201ENST00000526425 FOXR1Q6PIV2 292 aa11.15□□□□□ -0.63
USP35-201ENST00000526425 IGDCC4Q8TDY8 1250 aa11.15□□□□□ -0.63
USP35-201ENST00000526425 ZNF512BQ96KM6 892 aaPredicted RBP11.15□□□□□ -0.63
USP35-201ENST00000526425 PCMTD1Q96MG8 357 aaPredicted RBP11.15□□□□□ -0.63
USP35-201ENST00000526425 YEATS4O95619 227 aa11.14□□□□□ -0.63
USP35-201ENST00000526425 CASP1P29466 404 aa11.14□□□□□ -0.63
USP35-201ENST00000526425 MAGEA9P43362 315 aa11.14□□□□□ -0.63
USP35-201ENST00000526425 GTF2IP78347 998 aa11.14□□□□□ -0.63
USP35-201ENST00000526425 GOLGA8FQ08AF8 430 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms