RNA–Protein interactions for RNA: ENST00000526215.5

PUM1-218, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-218ENST00000526215 IRF7Q92985 503 aa8.35□□□□□ -1.07
PUM1-218ENST00000526215 PBXIP1Q96AQ6 731 aa8.35□□□□□ -1.07
PUM1-218ENST00000526215 ARMC5Q96C12 935 aa8.35□□□□□ -1.07
PUM1-218ENST00000526215 GMCL1Q96IK5 515 aa8.35□□□□□ -1.07
PUM1-218ENST00000526215 BSDC1Q9NW68 430 aaPredicted RBP8.35□□□□□ -1.07
PUM1-218ENST00000526215 CWC25Q9NXE8 425 aaPredicted RBP8.35□□□□□ -1.07
PUM1-218ENST00000526215 SCHIP1Q9P0W5 487 aaPredicted RBP8.35□□□□□ -1.07
PUM1-218ENST00000526215 MINPP1Q9UNW1 487 aa8.35□□□□□ -1.07
PUM1-218ENST00000526215 LEMD3Q9Y2U8 911 aa8.35□□□□□ -1.07
PUM1-218ENST00000526215 DDX60Q8IY21 1712 aaKnown RBP8.34□□□□□ -1.07
PUM1-218ENST00000526215 BRCA2P51587 3418 aa8.34□□□□□ -1.07
PUM1-218ENST00000526215 SOX1O00570 391 aaPredicted RBP8.34□□□□□ -1.07
PUM1-218ENST00000526215 EN2P19622 333 aaPredicted RBP8.34□□□□□ -1.07
PUM1-218ENST00000526215 ITGA6P23229 1130 aa8.34□□□□□ -1.07
PUM1-218ENST00000526215 DPYDQ12882 1025 aa8.34□□□□□ -1.07
PUM1-218ENST00000526215 NFX1Q12986 1120 aaKnown RBP8.34□□□□□ -1.07
PUM1-218ENST00000526215 ARHGEF6Q15052 776 aa8.34□□□□□ -1.07
PUM1-218ENST00000526215 SUPT20HL1Q3ZLR7 823 aa8.34□□□□□ -1.07
PUM1-218ENST00000526215 C4orf17Q53FE4 359 aa8.34□□□□□ -1.07
PUM1-218ENST00000526215 DUSP27Q5VZP5 1158 aa8.34□□□□□ -1.07
PUM1-218ENST00000526215 ZBED3Q96IU2 234 aaPredicted RBP8.34□□□□□ -1.07
PUM1-218ENST00000526215 MXD3Q9BW11 206 aa8.34□□□□□ -1.07
PUM1-218ENST00000526215 CHMP4AQ9BY43 222 aa8.34□□□□□ -1.07
PUM1-218ENST00000526215 DEFB129Q9H1M3 183 aa8.34□□□□□ -1.07
PUM1-218ENST00000526215 EFCC1Q9HA90 598 aa8.34□□□□□ -1.07
PUM1-218ENST00000526215 IQSEC3Q9UPP2 1182 aaPredicted RBP8.34□□□□□ -1.07
PUM1-218ENST00000526215 RBBP6Q7Z6E9 1792 aaKnown RBP8.34□□□□□ -1.07
PUM1-218ENST00000526215 MED23Q9ULK4 1368 aa8.34□□□□□ -1.07
PUM1-218ENST00000526215 WTIPA6NIX2 430 aaPredicted RBP8.33□□□□□ -1.08
PUM1-218ENST00000526215 H7C1W4 665 aa8.33□□□□□ -1.08
PUM1-218ENST00000526215 DKK1O94907 266 aa8.33□□□□□ -1.08
PUM1-218ENST00000526215 CCT4P50991 539 aaKnown RBP8.33□□□□□ -1.08
PUM1-218ENST00000526215 EPHA4P54764 986 aa8.33□□□□□ -1.08
PUM1-218ENST00000526215 SP3Q02447 781 aa8.33□□□□□ -1.08
PUM1-218ENST00000526215 ELOAQ14241 798 aaKnown RBP8.33□□□□□ -1.08
PUM1-218ENST00000526215 NBPF11Q86T75 865 aa8.33□□□□□ -1.08
PUM1-218ENST00000526215 DEFB123Q8N688 67 aa8.33□□□□□ -1.08
PUM1-218ENST00000526215 FAM200AQ8TCP9 573 aa8.33□□□□□ -1.08
PUM1-218ENST00000526215 WNK4Q96J92 1243 aa8.33□□□□□ -1.08
PUM1-218ENST00000526215 MYD88Q99836 296 aa8.33□□□□□ -1.08
PUM1-218ENST00000526215 METTL22Q9BUU2 404 aaPredicted RBP8.33□□□□□ -1.08
PUM1-218ENST00000526215 C1orf115Q9H7X2 142 aa8.33□□□□□ -1.08
PUM1-218ENST00000526215 MRS2Q9HD23 443 aa8.33□□□□□ -1.08
PUM1-218ENST00000526215 CHMP3Q9Y3E7 222 aa8.33□□□□□ -1.08
PUM1-218ENST00000526215 PPP2R3BQ9Y5P8 575 aa8.33□□□□□ -1.08
PUM1-218ENST00000526215 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.32□□□□□ -1.08
PUM1-218ENST00000526215 SFI1A8K8P3 1242 aa8.32□□□□□ -1.08
PUM1-218ENST00000526215 IGF2BP3O00425 579 aaKnown RBP eCLIP8.32□□□□□ -1.08
PUM1-218ENST00000526215 SASH1O94885 1247 aa8.32□□□□□ -1.08
PUM1-218ENST00000526215 DDX58O95786 925 aaKnown RBP8.32□□□□□ -1.08
PUM1-218ENST00000526215 F11P03951 625 aa8.32□□□□□ -1.08
PUM1-218ENST00000526215 PHKA2P46019 1235 aa8.32□□□□□ -1.08
PUM1-218ENST00000526215 CTSWP56202 376 aa8.32□□□□□ -1.08
PUM1-218ENST00000526215 DLGAP5Q15398 846 aa8.32□□□□□ -1.08
PUM1-218ENST00000526215 ALYREFQ86V81 257 aaKnown RBP8.32□□□□□ -1.08
PUM1-218ENST00000526215 KIAA0825Q8IV33 1275 aa8.32□□□□□ -1.08
PUM1-218ENST00000526215 TTLL11Q8NHH1 800 aa8.32□□□□□ -1.08
PUM1-218ENST00000526215 C1orf216Q8TAB5 229 aa8.32□□□□□ -1.08
PUM1-218ENST00000526215 CD99L2Q8TCZ2 262 aa8.32□□□□□ -1.08
PUM1-218ENST00000526215 NANOS1Q8WY41 292 aaKnown RBP8.32□□□□□ -1.08
PUM1-218ENST00000526215 JARID2Q92833 1246 aaPredicted RBP8.32□□□□□ -1.08
PUM1-218ENST00000526215 RUNDC1Q96C34 613 aa8.32□□□□□ -1.08
PUM1-218ENST00000526215 GAS2L1Q99501 681 aaPredicted RBP8.32□□□□□ -1.08
PUM1-218ENST00000526215 P2RX7Q99572 595 aaKnown RBP8.32□□□□□ -1.08
PUM1-218ENST00000526215 ANKRD2Q9GZV1 360 aa8.32□□□□□ -1.08
PUM1-218ENST00000526215 PHAXQ9H814 394 aaKnown RBP8.32□□□□□ -1.08
PUM1-218ENST00000526215 COL4A1P02462 1669 aa8.32□□□□□ -1.08
PUM1-218ENST00000526215 MYO1BO43795 1136 aa8.31□□□□□ -1.08
PUM1-218ENST00000526215 ATG7O95352 703 aa8.31□□□□□ -1.08
PUM1-218ENST00000526215 VSIG8P0DPA2 414 aa8.31□□□□□ -1.08
PUM1-218ENST00000526215 IGHMBP2P38935 993 aaKnown RBP8.31□□□□□ -1.08
PUM1-218ENST00000526215 PLA2G4AP47712 749 aa8.31□□□□□ -1.08
PUM1-218ENST00000526215 IREB2P48200 963 aaKnown RBP8.31□□□□□ -1.08
PUM1-218ENST00000526215 FOXK2Q01167 660 aa8.31□□□□□ -1.08
PUM1-218ENST00000526215 CRHR2Q13324 411 aa8.31□□□□□ -1.08
PUM1-218ENST00000526215 RALBP1Q15311 655 aa8.31□□□□□ -1.08
PUM1-218ENST00000526215 RIPOR1Q6ZS17 1223 aa8.31□□□□□ -1.08
PUM1-218ENST00000526215 TXNRD3Q86VQ6 643 aa8.31□□□□□ -1.08
PUM1-218ENST00000526215 SLC9A9Q8IVB4 645 aa8.31□□□□□ -1.08
PUM1-218ENST00000526215 TSEN2Q8NCE0 465 aaKnown RBP8.31□□□□□ -1.08
PUM1-218ENST00000526215 PRO3102Q9H379 93 aa8.31□□□□□ -1.08
PUM1-218ENST00000526215 NOVA2Q9UNW9 492 aaKnown RBP8.31□□□□□ -1.08
PUM1-218ENST00000526215 MUC3AQ02505 3323 aa8.31□□□□□ -1.08
PUM1-218ENST00000526215 ZNF804BA4D1E1 1349 aa8.3□□□□□ -1.08
PUM1-218ENST00000526215 LAMA3Q16787 3333 aa8.3□□□□□ -1.08
PUM1-218ENST00000526215 RRP9O43818 475 aaKnown RBP8.3□□□□□ -1.08
PUM1-218ENST00000526215 USP2O75604 605 aaPredicted RBP8.3□□□□□ -1.08
PUM1-218ENST00000526215 SLC4A8Q2Y0W8 1093 aa8.3□□□□□ -1.08
PUM1-218ENST00000526215 CCDC146Q8IYE0 955 aa8.3□□□□□ -1.08
PUM1-218ENST00000526215 TRIM22Q8IYM9 498 aa8.3□□□□□ -1.08
PUM1-218ENST00000526215 ANKRD13AQ8IZ07 590 aa8.3□□□□□ -1.08
PUM1-218ENST00000526215 PGBD3Q8N328 593 aa8.3□□□□□ -1.08
PUM1-218ENST00000526215 ZNF333Q96JL9 665 aa8.3□□□□□ -1.08
PUM1-218ENST00000526215 CLMNQ96JQ2 1002 aa8.3□□□□□ -1.08
PUM1-218ENST00000526215 PKNOX2Q96KN3 472 aa8.3□□□□□ -1.08
PUM1-218ENST00000526215 PTPN18Q99952 460 aa8.3□□□□□ -1.08
PUM1-218ENST00000526215 HINFPQ9BQA5 517 aa8.3□□□□□ -1.08
PUM1-218ENST00000526215 GREM2Q9H772 168 aa8.3□□□□□ -1.08
PUM1-218ENST00000526215 MBIPQ9NS73 344 aa8.3□□□□□ -1.08
PUM1-218ENST00000526215 MTMR10Q9NXD2 777 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms