RNA–Protein interactions for RNA: ENST00000525945.1

GRAMD1B-205, Transcript of GRAM domain containing 1B, humanhuman

TSL 2

Gene GRAMD1B, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-205ENST00000525945 TRIM60Q495X7 471 aa9.95□□□□□ -0.82
GRAMD1B-205ENST00000525945 CERKLQ49MI3 558 aaPredicted RBP9.95□□□□□ -0.82
GRAMD1B-205ENST00000525945 TMED8Q6PL24 325 aaPredicted RBP9.95□□□□□ -0.82
GRAMD1B-205ENST00000525945 TTC6Q86TZ1 520 aa9.95□□□□□ -0.82
GRAMD1B-205ENST00000525945 TRPV1Q8NER1 839 aa9.95□□□□□ -0.82
GRAMD1B-205ENST00000525945 ZNF512BQ96KM6 892 aaPredicted RBP9.95□□□□□ -0.82
GRAMD1B-205ENST00000525945 TTYH1Q9H313 450 aaPredicted RBP9.95□□□□□ -0.82
GRAMD1B-205ENST00000525945 RPAP3Q9H6T3 665 aaPredicted RBP9.95□□□□□ -0.82
GRAMD1B-205ENST00000525945 PDLIM7Q9NR12 457 aa9.95□□□□□ -0.82
GRAMD1B-205ENST00000525945 SNRKQ9NRH2 765 aa9.95□□□□□ -0.82
GRAMD1B-205ENST00000525945 BTBD7Q9P203 1132 aa9.95□□□□□ -0.82
GRAMD1B-205ENST00000525945 SSUH2Q9Y2M2 353 aa9.95□□□□□ -0.82
GRAMD1B-205ENST00000525945 DNAH12Q6ZR08 3092 aa9.94□□□□□ -0.82
GRAMD1B-205ENST00000525945 MYH1P12882 1939 aa9.94□□□□□ -0.82
GRAMD1B-205ENST00000525945 CYP7A1P22680 504 aa9.94□□□□□ -0.82
GRAMD1B-205ENST00000525945 TNNI3KQ59H18 835 aa9.94□□□□□ -0.82
GRAMD1B-205ENST00000525945 TRMT2AQ8IZ69 625 aaKnown RBP9.94□□□□□ -0.82
GRAMD1B-205ENST00000525945 SHCBP1Q8NEM2 672 aa9.94□□□□□ -0.82
GRAMD1B-205ENST00000525945 RNPC3Q96LT9 517 aaKnown RBP9.94□□□□□ -0.82
GRAMD1B-205ENST00000525945 HOXC10Q9NYD6 342 aa9.94□□□□□ -0.82
GRAMD1B-205ENST00000525945 TACC3Q9Y6A5 838 aa9.94□□□□□ -0.82
GRAMD1B-205ENST00000525945 FPGT-TNNI3KV9GXZ4 949 aa9.94□□□□□ -0.82
GRAMD1B-205ENST00000525945 VCANP13611 3396 aa9.94□□□□□ -0.82
GRAMD1B-205ENST00000525945 A0A0G2JMZ2 1700 aa9.93□□□□□ -0.82
GRAMD1B-205ENST00000525945 LAMA2P24043 3122 aaKnown RBP9.93□□□□□ -0.82
GRAMD1B-205ENST00000525945 PNMA6EA0A0J9YXQ4 647 aa9.93□□□□□ -0.82
GRAMD1B-205ENST00000525945 TRIM43BA6NCK2 446 aa9.93□□□□□ -0.82
GRAMD1B-205ENST00000525945 PDIA4P13667 645 aaKnown RBP9.93□□□□□ -0.82
GRAMD1B-205ENST00000525945 ADCYAP1R1P41586 468 aa9.93□□□□□ -0.82
GRAMD1B-205ENST00000525945 ZAP70P43403 619 aa9.93□□□□□ -0.82
GRAMD1B-205ENST00000525945 DYNLL1P63167 89 aaKnown RBP9.93□□□□□ -0.82
GRAMD1B-205ENST00000525945 COG2Q14746 738 aa9.93□□□□□ -0.82
GRAMD1B-205ENST00000525945 LRRC41Q15345 812 aa9.93□□□□□ -0.82
GRAMD1B-205ENST00000525945 TJAP1Q5JTD0 557 aa9.93□□□□□ -0.82
GRAMD1B-205ENST00000525945 ABRAQ8N0Z2 381 aa9.93□□□□□ -0.82
GRAMD1B-205ENST00000525945 MB21D1Q8N884 522 aa9.93□□□□□ -0.82
GRAMD1B-205ENST00000525945 TRIM43Q96BQ3 446 aaPredicted RBP9.93□□□□□ -0.82
GRAMD1B-205ENST00000525945 CDCA7LQ96GN5 454 aa9.93□□□□□ -0.82
GRAMD1B-205ENST00000525945 MOV10L1Q9BXT6 1211 aaKnown RBP9.93□□□□□ -0.82
GRAMD1B-205ENST00000525945 SPATC1LQ9H0A9 340 aa9.93□□□□□ -0.82
GRAMD1B-205ENST00000525945 MROH8Q9H579 483 aa9.93□□□□□ -0.82
GRAMD1B-205ENST00000525945 IPO8O15397 1037 aaKnown RBP9.92□□□□□ -0.82
GRAMD1B-205ENST00000525945 IDH1O75874 414 aaKnown RBP9.92□□□□□ -0.82
GRAMD1B-205ENST00000525945 CLTBP09497 229 aa9.92□□□□□ -0.82
GRAMD1B-205ENST00000525945 ERCC3P19447 782 aa9.92□□□□□ -0.82
GRAMD1B-205ENST00000525945 RARSP54136 660 aaKnown RBP9.92□□□□□ -0.82
GRAMD1B-205ENST00000525945 OS9Q13438 667 aaPredicted RBP9.92□□□□□ -0.82
GRAMD1B-205ENST00000525945 ANO1Q5XXA6 986 aa9.92□□□□□ -0.82
GRAMD1B-205ENST00000525945 RNF180Q86T96 592 aa9.92□□□□□ -0.82
GRAMD1B-205ENST00000525945 MIGA1Q8NAN2 632 aa9.92□□□□□ -0.82
GRAMD1B-205ENST00000525945 ACER1Q8TDN7 264 aa9.92□□□□□ -0.82
GRAMD1B-205ENST00000525945 DBNDD2Q9BQY9 259 aa9.92□□□□□ -0.82
GRAMD1B-205ENST00000525945 TANGO6Q9C0B7 1094 aa9.92□□□□□ -0.82
GRAMD1B-205ENST00000525945 NRBP1Q9UHY1 535 aa9.92□□□□□ -0.82
GRAMD1B-205ENST00000525945 SPTBN5Q9NRC6 3674 aaKnown RBP9.92□□□□□ -0.82
GRAMD1B-205ENST00000525945 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.91□□□□□ -0.82
GRAMD1B-205ENST00000525945 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.91□□□□□ -0.82
GRAMD1B-205ENST00000525945 TNFRSF10AO00220 468 aa9.91□□□□□ -0.82
GRAMD1B-205ENST00000525945 RARBP10826 455 aa9.91□□□□□ -0.82
GRAMD1B-205ENST00000525945 RAG1P15918 1043 aa9.91□□□□□ -0.82
GRAMD1B-205ENST00000525945 SHMT1P34896 483 aa9.91□□□□□ -0.82
GRAMD1B-205ENST00000525945 TLE2Q04725 743 aa9.91□□□□□ -0.82
GRAMD1B-205ENST00000525945 FPGSQ05932 587 aa9.91□□□□□ -0.82
GRAMD1B-205ENST00000525945 MAP3K12Q12852 859 aa9.91□□□□□ -0.82
GRAMD1B-205ENST00000525945 FAM47AQ5JRC9 791 aa9.91□□□□□ -0.82
GRAMD1B-205ENST00000525945 SH3RF1Q7Z6J0 888 aa9.91□□□□□ -0.82
GRAMD1B-205ENST00000525945 MAGEB6Q8N7X4 407 aa9.91□□□□□ -0.82
GRAMD1B-205ENST00000525945 FERMT2Q96AC1 680 aa9.91□□□□□ -0.82
GRAMD1B-205ENST00000525945 MAML3Q96JK9 1138 aa9.91□□□□□ -0.82
GRAMD1B-205ENST00000525945 XPNPEP3Q9NQH7 507 aa9.91□□□□□ -0.82
GRAMD1B-205ENST00000525945 PIH1D3Q9NQM4 214 aaKnown RBP9.91□□□□□ -0.82
GRAMD1B-205ENST00000525945 PHF24Q9UPV7 400 aa9.91□□□□□ -0.82
GRAMD1B-205ENST00000525945 CUL9Q8IWT3 2517 aa9.91□□□□□ -0.82
GRAMD1B-205ENST00000525945 CDH23Q9H251 3354 aa9.91□□□□□ -0.82
GRAMD1B-205ENST00000525945 ROBO3Q96MS0 1386 aa9.9□□□□□ -0.82
GRAMD1B-205ENST00000525945 MYO5AQ9Y4I1 1855 aaKnown RBP9.9□□□□□ -0.82
GRAMD1B-205ENST00000525945 MPHOSPH10O00566 681 aaKnown RBP9.9□□□□□ -0.82
GRAMD1B-205ENST00000525945 KIAA0355O15063 1070 aa9.9□□□□□ -0.82
GRAMD1B-205ENST00000525945 COBLO75128 1261 aa9.9□□□□□ -0.82
GRAMD1B-205ENST00000525945 POLR3DP05423 398 aaPredicted RBP9.9□□□□□ -0.82
GRAMD1B-205ENST00000525945 FCER1AP12319 257 aa9.9□□□□□ -0.82
GRAMD1B-205ENST00000525945 COL9A1P20849 921 aa9.9□□□□□ -0.82
GRAMD1B-205ENST00000525945 DNAJB2P25686 324 aa9.9□□□□□ -0.82
GRAMD1B-205ENST00000525945 FXR2P51116 673 aaKnown RBP eCLIP9.9□□□□□ -0.82
GRAMD1B-205ENST00000525945 PLS1Q14651 629 aa9.9□□□□□ -0.82
GRAMD1B-205ENST00000525945 SEPT2Q15019 361 aa9.9□□□□□ -0.82
GRAMD1B-205ENST00000525945 NCAPG2Q86XI2 1143 aa9.9□□□□□ -0.82
GRAMD1B-205ENST00000525945 SH2D4AQ9H788 454 aa9.9□□□□□ -0.82
GRAMD1B-205ENST00000525945 PRUNE2Q8WUY3 3088 aa9.9□□□□□ -0.83
GRAMD1B-205ENST00000525945 NAV1Q8NEY1 1877 aa9.89□□□□□ -0.83
GRAMD1B-205ENST00000525945 A0A1W2PQ45 241 aaPredicted RBP9.89□□□□□ -0.83
GRAMD1B-205ENST00000525945 A0A1W2PQY0 241 aa9.89□□□□□ -0.83
GRAMD1B-205ENST00000525945 PQBP1O60828 265 aaKnown RBP9.89□□□□□ -0.83
GRAMD1B-205ENST00000525945 SURF6O75683 361 aaKnown RBP9.89□□□□□ -0.83
GRAMD1B-205ENST00000525945 FLOT1O75955 427 aa9.89□□□□□ -0.83
GRAMD1B-205ENST00000525945 SLC25A27O95847 323 aa9.89□□□□□ -0.83
GRAMD1B-205ENST00000525945 TRIM27P14373 513 aa9.89□□□□□ -0.83
GRAMD1B-205ENST00000525945 ITGB8P26012 769 aa9.89□□□□□ -0.83
GRAMD1B-205ENST00000525945 GUCY1A2P33402 732 aa9.89□□□□□ -0.83
GRAMD1B-205ENST00000525945 PLCD1P51178 756 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms