RNA–Protein interactions for RNA: ENST00000525812.1

RPUSD4-202, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-202ENST00000525812 TJAP1Q5JTD0 557 aa9.02□□□□□ -0.97
RPUSD4-202ENST00000525812 GJC2Q5T442 439 aaPredicted RBP9.02□□□□□ -0.97
RPUSD4-202ENST00000525812 DBNDD2Q9BQY9 259 aa9.02□□□□□ -0.97
RPUSD4-202ENST00000525812 RPAP3Q9H6T3 665 aaPredicted RBP9.02□□□□□ -0.97
RPUSD4-202ENST00000525812 CWC22Q9HCG8 908 aaKnown RBP9.02□□□□□ -0.97
RPUSD4-202ENST00000525812 PIH1D3Q9NQM4 214 aaKnown RBP9.02□□□□□ -0.97
RPUSD4-202ENST00000525812 MAST2Q6P0Q8 1798 aa9.01□□□□□ -0.97
RPUSD4-202ENST00000525812 ROBO3Q96MS0 1386 aa9.01□□□□□ -0.97
RPUSD4-202ENST00000525812 A0A1W2PRG0 241 aa9.01□□□□□ -0.97
RPUSD4-202ENST00000525812 ADCYAP1R1P41586 468 aa9.01□□□□□ -0.97
RPUSD4-202ENST00000525812 PLCD1P51178 756 aa9.01□□□□□ -0.97
RPUSD4-202ENST00000525812 TRIM60Q495X7 471 aa9.01□□□□□ -0.97
RPUSD4-202ENST00000525812 TTC39AQ5SRH9 613 aa9.01□□□□□ -0.97
RPUSD4-202ENST00000525812 AKNAD1Q5T1N1 836 aa9.01□□□□□ -0.97
RPUSD4-202ENST00000525812 RASIP1Q5U651 963 aa9.01□□□□□ -0.97
RPUSD4-202ENST00000525812 SH3RF1Q7Z6J0 888 aa9.01□□□□□ -0.97
RPUSD4-202ENST00000525812 SIAH1Q8IUQ4 282 aa9.01□□□□□ -0.97
RPUSD4-202ENST00000525812 MSL3Q8N5Y2 521 aaKnown RBP9.01□□□□□ -0.97
RPUSD4-202ENST00000525812 ATXN2LQ8WWM7 1075 aaKnown RBP9.01□□□□□ -0.97
RPUSD4-202ENST00000525812 MYLIPQ8WY64 445 aa9.01□□□□□ -0.97
RPUSD4-202ENST00000525812 MAML3Q96JK9 1138 aa9.01□□□□□ -0.97
RPUSD4-202ENST00000525812 FAM161BQ96MY7 647 aa9.01□□□□□ -0.97
RPUSD4-202ENST00000525812 FEZ1Q99689 392 aa9.01□□□□□ -0.97
RPUSD4-202ENST00000525812 RIOK1Q9BRS2 568 aaKnown RBP9.01□□□□□ -0.97
RPUSD4-202ENST00000525812 SNRKQ9NRH2 765 aa9.01□□□□□ -0.97
RPUSD4-202ENST00000525812 ATP11BQ9Y2G3 1177 aa9.01□□□□□ -0.97
RPUSD4-202ENST00000525812 ZNF236Q9UL36 1845 aa9.01□□□□□ -0.97
RPUSD4-202ENST00000525812 ZNF316A6NFI3 1004 aaPredicted RBP9□□□□□ -0.97
RPUSD4-202ENST00000525812 CLTBP09497 229 aa9□□□□□ -0.97
RPUSD4-202ENST00000525812 FCER1AP12319 257 aa9□□□□□ -0.97
RPUSD4-202ENST00000525812 TRIM27P14373 513 aa9□□□□□ -0.97
RPUSD4-202ENST00000525812 FOSL2P15408 326 aa9□□□□□ -0.97
RPUSD4-202ENST00000525812 ERCC3P19447 782 aa9□□□□□ -0.97
RPUSD4-202ENST00000525812 USP5P45974 858 aa9□□□□□ -0.97
RPUSD4-202ENST00000525812 DYNLL1P63167 89 aaKnown RBP9□□□□□ -0.97
RPUSD4-202ENST00000525812 NKX3-2P78367 333 aa9□□□□□ -0.97
RPUSD4-202ENST00000525812 MAP3K12Q12852 859 aa9□□□□□ -0.97
RPUSD4-202ENST00000525812 RAB3GAP1Q15042 981 aa9□□□□□ -0.97
RPUSD4-202ENST00000525812 RNF180Q86T96 592 aa9□□□□□ -0.97
RPUSD4-202ENST00000525812 SAP30BPQ9UHR5 308 aaKnown RBP9□□□□□ -0.97
RPUSD4-202ENST00000525812 DBNLQ9UJU6 430 aaKnown RBP9□□□□□ -0.97
RPUSD4-202ENST00000525812 TMX2Q9Y320 296 aa9□□□□□ -0.97
RPUSD4-202ENST00000525812 ARIH1Q9Y4X5 557 aaPredicted RBP9□□□□□ -0.97
RPUSD4-202ENST00000525812 LTBP2Q14767 1821 aa9□□□□□ -0.97
RPUSD4-202ENST00000525812 FOCADQ5VW36 1801 aa8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 CDH23Q9H251 3354 aa8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 MOXD2PA6NHM9 499 aa8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 TNFRSF10AO00220 468 aa8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 ZNF865P0CJ78 1059 aaPredicted RBP8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 ITGB8P26012 769 aa8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 COPB2P35606 906 aa8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 CDK7P50613 346 aa8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 EPHB4P54760 987 aa8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 SEPT2Q15019 361 aa8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 ZNF792Q3KQV3 632 aa8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 WDR78Q5VTH9 848 aa8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 CCSAPQ6IQ19 270 aaPredicted RBP8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 MAMDC4Q6UXC1 1216 aa8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 TMEM179Q6ZVK1 233 aa8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 KLHDC9Q8NEP7 349 aa8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 EAF2Q96CJ1 260 aaPredicted RBP8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 CCDC17Q96LX7 622 aa8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 TINF2Q9BSI4 451 aa8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 SWAP70Q9UH65 585 aa8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 NDUFB9Q9Y6M9 179 aa8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 ELP1O95163 1332 aa8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 BDP1A6H8Y1 2624 aa8.99□□□□□ -0.97
RPUSD4-202ENST00000525812 FRMPD3Q5JV73 1810 aa8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 WDR46O15213 610 aaKnown RBP8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 ADAMTS4O75173 837 aa8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 SURF6O75683 361 aaKnown RBP8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 TIMP1P01033 207 aa8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 RARBP10826 455 aa8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 AKR1A1P14550 325 aa8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 RAG1P15918 1043 aa8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 DNAJB2P25686 324 aa8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 CST5P28325 142 aaPredicted RBP8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 FAAP100Q0VG06 881 aa8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 GRIN2CQ14957 1233 aa8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 TTF1Q15361 905 aaPredicted RBP8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 FAM47AQ5JRC9 791 aa8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 CCDC174Q6PII3 467 aa8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 RIOX2Q8IUF8 465 aa8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 MAGEB6Q8N7X4 407 aa8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 NUP133Q8WUM0 1156 aa8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 RNPC3Q96LT9 517 aaKnown RBP8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 SEZ6LQ9BYH1 1024 aa8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 ZNF576Q9H609 170 aa8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 SH2D4AQ9H788 454 aa8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 XPNPEP3Q9NQH7 507 aa8.98□□□□□ -0.97
RPUSD4-202ENST00000525812 SMCHD1A6NHR9 2005 aa8.97□□□□□ -0.97
RPUSD4-202ENST00000525812 DCDC2CA8MYV0 355 aa8.97□□□□□ -0.97
RPUSD4-202ENST00000525812 IDH1O75874 414 aaKnown RBP8.97□□□□□ -0.97
RPUSD4-202ENST00000525812 FPGSQ05932 587 aa8.97□□□□□ -0.97
RPUSD4-202ENST00000525812 TMEM132BQ14DG7 1078 aa8.97□□□□□ -0.97
RPUSD4-202ENST00000525812 ZYXQ15942 572 aaKnown RBP8.97□□□□□ -0.97
RPUSD4-202ENST00000525812 KIAA1755Q5JYT7 1200 aa8.97□□□□□ -0.97
RPUSD4-202ENST00000525812 PRAMEF19Q5SWL8 479 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms