RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 PAGR1Q9BTK6 254 aa22.05■■□□□ 1.12
TSPAN4-215ENST00000525334 VCPKMTQ9H867 229 aa22.05■■□□□ 1.12
TSPAN4-215ENST00000525334 FLT3LGP49771 235 aa22.04■■□□□ 1.12
TSPAN4-215ENST00000525334 SPICE1Q8N0Z3 855 aa22.04■■□□□ 1.12
TSPAN4-215ENST00000525334 LPAR1Q92633 364 aa22.04■■□□□ 1.12
TSPAN4-215ENST00000525334 SPDYE16A6NNV3 312 aaPredicted RBP22.03■■□□□ 1.12
TSPAN4-215ENST00000525334 SLC3A2P08195 630 aaKnown RBP22.03■■□□□ 1.12
TSPAN4-215ENST00000525334 GRK4P32298 578 aa22.03■■□□□ 1.12
TSPAN4-215ENST00000525334 ERVK-9P63128 1117 aa22.03■■□□□ 1.12
TSPAN4-215ENST00000525334 ERVK-24P63145 666 aa22.03■■□□□ 1.12
TSPAN4-215ENST00000525334 PDE4BQ07343 736 aa22.03■■□□□ 1.12
TSPAN4-215ENST00000525334 ZNF444Q8N0Y2 327 aaPredicted RBP22.03■■□□□ 1.12
TSPAN4-215ENST00000525334 TMEM106CQ9BVX2 250 aa22.03■■□□□ 1.12
TSPAN4-215ENST00000525334 TANGO6Q9C0B7 1094 aa22.03■■□□□ 1.12
TSPAN4-215ENST00000525334 TNRC18O15417 2968 aaPredicted RBP22.03■■□□□ 1.12
TSPAN4-215ENST00000525334 CCDC171Q6TFL3 1326 aa22.03■■□□□ 1.12
TSPAN4-215ENST00000525334 RBBP6Q7Z6E9 1792 aaKnown RBP22.02■■□□□ 1.12
TSPAN4-215ENST00000525334 CNMDO75829 334 aa22.02■■□□□ 1.12
TSPAN4-215ENST00000525334 ALX1Q15699 326 aa22.02■■□□□ 1.12
TSPAN4-215ENST00000525334 Q3C1V9 767 aa22.02■■□□□ 1.12
TSPAN4-215ENST00000525334 LBX2Q6XYB7 198 aa22.02■■□□□ 1.12
TSPAN4-215ENST00000525334 RABGAP1Q9Y3P9 1069 aa22.02■■□□□ 1.12
TSPAN4-215ENST00000525334 DOCK3Q8IZD9 2030 aa22.02■■□□□ 1.12
TSPAN4-215ENST00000525334 IGKV6D-41A0A0C4DH26 115 aa22.01■■□□□ 1.11
TSPAN4-215ENST00000525334 MYCP01106 439 aaPredicted RBP22.01■■□□□ 1.11
TSPAN4-215ENST00000525334 HSPD1P10809 573 aaKnown RBP22.01■■□□□ 1.11
TSPAN4-215ENST00000525334 GSPT1P15170 499 aaKnown RBP22.01■■□□□ 1.11
TSPAN4-215ENST00000525334 EN2P19622 333 aaPredicted RBP22.01■■□□□ 1.11
TSPAN4-215ENST00000525334 CTDSPL2Q05D32 466 aa22.01■■□□□ 1.11
TSPAN4-215ENST00000525334 IRF5Q13568 498 aa22.01■■□□□ 1.11
TSPAN4-215ENST00000525334 TTC22Q5TAA0 569 aa22.01■■□□□ 1.11
TSPAN4-215ENST00000525334 PORCNQ9H237 461 aa22.01■■□□□ 1.11
TSPAN4-215ENST00000525334 DIAPH3Q9NSV4 1193 aa22.01■■□□□ 1.11
TSPAN4-215ENST00000525334 PLIN4Q96Q06 1357 aa22■■□□□ 1.11
TSPAN4-215ENST00000525334 RLFQ13129 1914 aa22■■□□□ 1.11
TSPAN4-215ENST00000525334 BRCA2P51587 3418 aa22■■□□□ 1.11
TSPAN4-215ENST00000525334 WDR46O15213 610 aaKnown RBP22■■□□□ 1.11
TSPAN4-215ENST00000525334 COG2Q14746 738 aa22■■□□□ 1.11
TSPAN4-215ENST00000525334 CWC27Q6UX04 472 aaKnown RBP22■■□□□ 1.11
TSPAN4-215ENST00000525334 SLAIN1Q8ND83 568 aa22■■□□□ 1.11
TSPAN4-215ENST00000525334 GOPCQ9HD26 462 aa22■■□□□ 1.11
TSPAN4-215ENST00000525334 BTBD7Q9P203 1132 aa22■■□□□ 1.11
TSPAN4-215ENST00000525334 NYAP2Q9P242 653 aa22■■□□□ 1.11
TSPAN4-215ENST00000525334 ANAPC4Q9UJX5 808 aa22■■□□□ 1.11
TSPAN4-215ENST00000525334 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22■■□□□ 1.11
TSPAN4-215ENST00000525334 A0A0G2JMZ2 1700 aa22■■□□□ 1.11
TSPAN4-215ENST00000525334 HIP1O00291 1037 aa21.99■■□□□ 1.11
TSPAN4-215ENST00000525334 ADCY3O60266 1144 aa21.99■■□□□ 1.11
TSPAN4-215ENST00000525334 FGAP02671 866 aa21.99■■□□□ 1.11
TSPAN4-215ENST00000525334 TSPY3P0CV98 308 aa21.99■■□□□ 1.11
TSPAN4-215ENST00000525334 TSPY8P0CW00 308 aa21.99■■□□□ 1.11
TSPAN4-215ENST00000525334 MAPK4P31152 587 aa21.99■■□□□ 1.11
TSPAN4-215ENST00000525334 FAM47AQ5JRC9 791 aa21.99■■□□□ 1.11
TSPAN4-215ENST00000525334 NEDD1Q8NHV4 660 aa21.99■■□□□ 1.11
TSPAN4-215ENST00000525334 CEP95Q96GE4 821 aa21.99■■□□□ 1.11
TSPAN4-215ENST00000525334 GJD2Q9UKL4 321 aa21.99■■□□□ 1.11
TSPAN4-215ENST00000525334 ZMYM6O95789 1325 aa21.99■■□□□ 1.11
TSPAN4-215ENST00000525334 PLXNB2O15031 1838 aa21.99■■□□□ 1.11
TSPAN4-215ENST00000525334 RAD21O60216 631 aa21.98■■□□□ 1.11
TSPAN4-215ENST00000525334 FLOT1O75955 427 aa21.98■■□□□ 1.11
TSPAN4-215ENST00000525334 ELNP15502 786 aa21.98■■□□□ 1.11
TSPAN4-215ENST00000525334 MFAP1P55081 439 aaKnown RBP21.98■■□□□ 1.11
TSPAN4-215ENST00000525334 TFAP4Q01664 338 aa21.98■■□□□ 1.11
TSPAN4-215ENST00000525334 CCAR1Q8IX12 1150 aaKnown RBP21.98■■□□□ 1.11
TSPAN4-215ENST00000525334 PXYLP1Q8TE99 480 aa21.98■■□□□ 1.11
TSPAN4-215ENST00000525334 INCENPQ9NQS7 918 aa21.98■■□□□ 1.11
TSPAN4-215ENST00000525334 MTMR4Q9NYA4 1195 aa21.98■■□□□ 1.11
TSPAN4-215ENST00000525334 HOXC10Q9NYD6 342 aa21.98■■□□□ 1.11
TSPAN4-215ENST00000525334 BIN2Q9UBW5 565 aaPredicted RBP21.98■■□□□ 1.11
TSPAN4-215ENST00000525334 TACC3Q9Y6A5 838 aa21.98■■□□□ 1.11
TSPAN4-215ENST00000525334 PARP14Q460N5 1801 aa21.98■■□□□ 1.11
TSPAN4-215ENST00000525334 PDE4DIPQ5VU43 2346 aa21.97■■□□□ 1.11
TSPAN4-215ENST00000525334 DSG3P32926 999 aa21.97■■□□□ 1.11
TSPAN4-215ENST00000525334 CCNA1P78396 465 aa21.97■■□□□ 1.11
TSPAN4-215ENST00000525334 MTFR1Q15390 333 aa21.97■■□□□ 1.11
TSPAN4-215ENST00000525334 GPR142Q7Z601 462 aa21.97■■□□□ 1.11
TSPAN4-215ENST00000525334 CLIP2Q9UDT6 1046 aa21.97■■□□□ 1.11
TSPAN4-215ENST00000525334 MYH4Q9Y623 1939 aa21.97■■□□□ 1.11
TSPAN4-215ENST00000525334 FAM83BQ5T0W9 1011 aa21.96■■□□□ 1.11
TSPAN4-215ENST00000525334 ATG4CQ96DT6 458 aa21.96■■□□□ 1.11
TSPAN4-215ENST00000525334 F5H6K3 240 aa21.95■■□□□ 1.1
TSPAN4-215ENST00000525334 TTLL1O95922 423 aa21.95■■□□□ 1.1
TSPAN4-215ENST00000525334 UBXN2AP68543 259 aa21.95■■□□□ 1.1
TSPAN4-215ENST00000525334 KLRC3Q07444 240 aa21.95■■□□□ 1.1
TSPAN4-215ENST00000525334 PLEKHH3Q7Z736 793 aa21.95■■□□□ 1.1
TSPAN4-215ENST00000525334 SOCS4Q8WXH5 440 aa21.95■■□□□ 1.1
TSPAN4-215ENST00000525334 MKL1Q969V6 931 aa21.95■■□□□ 1.1
TSPAN4-215ENST00000525334 FBXO28Q9NVF7 368 aa21.95■■□□□ 1.1
TSPAN4-215ENST00000525334 TSPY2A6NKD2 308 aa21.94■■□□□ 1.1
TSPAN4-215ENST00000525334 ORC4O43929 436 aa21.94■■□□□ 1.1
TSPAN4-215ENST00000525334 NDUFB10O96000 172 aa21.94■■□□□ 1.1
TSPAN4-215ENST00000525334 INHAP05111 366 aa21.94■■□□□ 1.1
TSPAN4-215ENST00000525334 FGRP09769 529 aa21.94■■□□□ 1.1
TSPAN4-215ENST00000525334 HAND2P61296 217 aa21.94■■□□□ 1.1
TSPAN4-215ENST00000525334 SAMD1Q6SPF0 538 aaPredicted RBP21.94■■□□□ 1.1
TSPAN4-215ENST00000525334 LRRC47Q8N1G4 583 aaKnown RBP21.94■■□□□ 1.1
TSPAN4-215ENST00000525334 MB21D1Q8N884 522 aa21.94■■□□□ 1.1
TSPAN4-215ENST00000525334 NUP88Q99567 741 aaPredicted RBP21.94■■□□□ 1.1
TSPAN4-215ENST00000525334 NUDT12Q9BQG2 462 aa21.94■■□□□ 1.1
TSPAN4-215ENST00000525334 CWC22Q9HCG8 908 aaKnown RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms