RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 DDX20Q9UHI6 824 aaKnown RBP5.36□□□□□ -1.55
CD44-213ENST00000525209 ZBTB21Q9ULJ3 1066 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 ANKRD6Q9Y2G4 727 aa5.36□□□□□ -1.55
CD44-213ENST00000525209 ITIH6Q6UXX5 1313 aa5.35□□□□□ -1.55
CD44-213ENST00000525209 A0A1B0GVC2 190 aa5.35□□□□□ -1.55
CD44-213ENST00000525209 PABPN1LA6NDY0 278 aaKnown RBP5.35□□□□□ -1.55
CD44-213ENST00000525209 EML1O00423 815 aa5.35□□□□□ -1.55
CD44-213ENST00000525209 TLR3O15455 904 aaKnown RBP5.35□□□□□ -1.55
CD44-213ENST00000525209 PHACTR2O75167 634 aa5.35□□□□□ -1.55
CD44-213ENST00000525209 HNRNPCP07910 306 aaKnown RBP eCLIP5.35□□□□□ -1.55
CD44-213ENST00000525209 POU3F2P20265 443 aaPredicted RBP5.35□□□□□ -1.55
CD44-213ENST00000525209 LPOP22079 712 aaPredicted RBP5.35□□□□□ -1.55
CD44-213ENST00000525209 L1CAMP32004 1257 aa5.35□□□□□ -1.55
CD44-213ENST00000525209 CYP2C19P33261 490 aa5.35□□□□□ -1.55
CD44-213ENST00000525209 MCM4P33991 863 aa5.35□□□□□ -1.55
CD44-213ENST00000525209 IREB2P48200 963 aaKnown RBP5.35□□□□□ -1.55
CD44-213ENST00000525209 ALDH5A1P51649 535 aaPredicted RBP5.35□□□□□ -1.55
CD44-213ENST00000525209 SMTNP53814 917 aa5.35□□□□□ -1.55
CD44-213ENST00000525209 APBA1Q02410 837 aa5.35□□□□□ -1.55
CD44-213ENST00000525209 ADCY1Q08828 1119 aa5.35□□□□□ -1.55
CD44-213ENST00000525209 LAMC2Q13753 1193 aa5.35□□□□□ -1.55
CD44-213ENST00000525209 MAP7Q14244 749 aa5.35□□□□□ -1.55
CD44-213ENST00000525209 PTPN21Q16825 1174 aa5.35□□□□□ -1.55
CD44-213ENST00000525209 ARHGAP29Q52LW3 1261 aa5.35□□□□□ -1.55
CD44-213ENST00000525209 FOXB2Q5VYV0 432 aa5.35□□□□□ -1.55
CD44-213ENST00000525209 VASH1Q7L8A9 365 aaPredicted RBP5.35□□□□□ -1.55
CD44-213ENST00000525209 LMNTD2Q8IXW0 634 aa5.35□□□□□ -1.55
CD44-213ENST00000525209 REXO1Q8N1G1 1221 aaKnown RBP5.35□□□□□ -1.55
CD44-213ENST00000525209 NAXEQ8NCW5 288 aa5.35□□□□□ -1.55
CD44-213ENST00000525209 ZNF496Q96IT1 587 aaPredicted RBP5.35□□□□□ -1.55
CD44-213ENST00000525209 EXOC2Q96KP1 924 aa5.35□□□□□ -1.55
CD44-213ENST00000525209 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.35□□□□□ -1.55
CD44-213ENST00000525209 KIAA1586Q9HCI6 787 aa5.35□□□□□ -1.55
CD44-213ENST00000525209 BICRAQ9NZM4 1560 aa5.34□□□□□ -1.55
CD44-213ENST00000525209 ERCC6Q03468 1493 aa5.34□□□□□ -1.55
CD44-213ENST00000525209 DDX3YO15523 660 aaKnown RBP5.34□□□□□ -1.55
CD44-213ENST00000525209 CNOT4O95628 575 aaKnown RBP5.34□□□□□ -1.55
CD44-213ENST00000525209 IGHDP01880 384 aa5.34□□□□□ -1.55
CD44-213ENST00000525209 POLR3DP05423 398 aaPredicted RBP5.34□□□□□ -1.55
CD44-213ENST00000525209 PF4V1P10720 104 aa5.34□□□□□ -1.55
CD44-213ENST00000525209 HSD3B1P14060 373 aa5.34□□□□□ -1.55
CD44-213ENST00000525209 HOXC13P31276 330 aa5.34□□□□□ -1.55
CD44-213ENST00000525209 TMPRSS15P98073 1019 aa5.34□□□□□ -1.55
CD44-213ENST00000525209 NR5A1Q13285 461 aa5.34□□□□□ -1.55
CD44-213ENST00000525209 SCARF1Q14162 830 aa5.34□□□□□ -1.55
CD44-213ENST00000525209 KIF22Q14807 665 aa5.34□□□□□ -1.55
CD44-213ENST00000525209 PCBP1Q15365 356 aaKnown RBP eCLIP5.34□□□□□ -1.55
CD44-213ENST00000525209 PKN3Q6P5Z2 889 aa5.34□□□□□ -1.55
CD44-213ENST00000525209 HSCBQ8IWL3 235 aa5.34□□□□□ -1.55
CD44-213ENST00000525209 OTUD6BQ8N6M0 293 aa5.34□□□□□ -1.55
CD44-213ENST00000525209 SPATA5Q8NB90 893 aa5.34□□□□□ -1.55
CD44-213ENST00000525209 FBXO27Q8NI29 283 aa5.34□□□□□ -1.55
CD44-213ENST00000525209 COG1Q8WTW3 980 aa5.34□□□□□ -1.55
CD44-213ENST00000525209 ATRIPQ8WXE1 791 aa5.34□□□□□ -1.55
CD44-213ENST00000525209 TBC1D20Q96BZ9 403 aa5.34□□□□□ -1.55
CD44-213ENST00000525209 NAA15Q9BXJ9 866 aaKnown RBP5.34□□□□□ -1.55
CD44-213ENST00000525209 MRPL4Q9BYD3 311 aaKnown RBP5.34□□□□□ -1.55
CD44-213ENST00000525209 ANLNQ9NQW6 1124 aa5.34□□□□□ -1.55
CD44-213ENST00000525209 TRMT13Q9NUP7 481 aaKnown RBP5.34□□□□□ -1.55
CD44-213ENST00000525209 NXF1Q9UBU9 619 aaKnown RBP5.34□□□□□ -1.55
CD44-213ENST00000525209 TRAK1Q9UPV9 953 aa5.34□□□□□ -1.55
CD44-213ENST00000525209 TTLL3Q9Y4R7 772 aa5.34□□□□□ -1.55
CD44-213ENST00000525209 A0A1W2PQH9 124 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 SERTM1A2A2V5 107 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 IQCA1LA6NCM1 817 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 PHF20L1A8MW92 1017 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 UPK3BL1B0FP48 263 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 UPK3BL2E5RIL1 263 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 CDK2AP1O14519 115 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 TLR5O60602 858 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 HMMRO75330 724 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 FBXO24O75426 580 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 BAIAP3O94812 1187 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 SNUPNO95149 360 aaKnown RBP5.33□□□□□ -1.56
CD44-213ENST00000525209 MAP3K6O95382 1288 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 TFE3P19532 575 aaPredicted RBP5.33□□□□□ -1.56
CD44-213ENST00000525209 CAPN3P20807 821 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 OAS2P29728 719 aaKnown RBP5.33□□□□□ -1.56
CD44-213ENST00000525209 MAPK9P45984 424 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 CWF19L2Q2TBE0 894 aaKnown RBP5.33□□□□□ -1.56
CD44-213ENST00000525209 SLC10A6Q3KNW5 377 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 TUBB8Q3ZCM7 444 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 ATP13A4Q4VNC1 1196 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 ESCO1Q5FWF5 840 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 TMEM240Q5SV17 173 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 INTS11Q5TA45 600 aaKnown RBP5.33□□□□□ -1.56
CD44-213ENST00000525209 SH3PXD2AQ5TCZ1 1133 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 DUSP27Q5VZP5 1158 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 AGMOQ6ZNB7 445 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 RPAINQ86UA6 219 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 MYLK4Q86YV6 388 aaPredicted RBP5.33□□□□□ -1.56
CD44-213ENST00000525209 TRIM42Q8IWZ5 723 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 CPA6Q8N4T0 437 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 ACRBPQ8NEB7 543 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 AIFM3Q96NN9 605 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 CENPOQ9BU64 300 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 ISCA1Q9BUE6 129 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 MENTQ9BUN1 341 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 SLC13A1Q9BZW2 595 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 EPN3Q9H201 632 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms