RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 OXCT2Q9BYC2 517 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-209ENST00000525132 ALG13Q9NP73 1137 aaKnown RBP4.8□□□□□ -1.64
CSDE1-209ENST00000525132 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.8□□□□□ -1.641e-6■■■■■ 139.3
CSDE1-209ENST00000525132 STIM2Q9P246 746 aa4.8□□□□□ -1.64
CSDE1-209ENST00000525132 H0Y858 1186 aa4.79□□□□□ -1.64
CSDE1-209ENST00000525132 BRD1O95696 1058 aa4.79□□□□□ -1.64
CSDE1-209ENST00000525132 EPXP11678 715 aa4.79□□□□□ -1.64
CSDE1-209ENST00000525132 SMAD3P84022 425 aaKnown RBP4.79□□□□□ -1.64
CSDE1-209ENST00000525132 SPEM2Q0P670 501 aa4.79□□□□□ -1.64
CSDE1-209ENST00000525132 USP48Q86UV5 1035 aa4.79□□□□□ -1.64
CSDE1-209ENST00000525132 GPC2Q8N158 579 aa4.79□□□□□ -1.64
CSDE1-209ENST00000525132 CEP63Q96MT8 703 aa4.79□□□□□ -1.64
CSDE1-209ENST00000525132 KRTAP4-5Q9BYR2 181 aa4.79□□□□□ -1.64
CSDE1-209ENST00000525132 TLR9Q9NR96 1032 aa4.79□□□□□ -1.64
CSDE1-209ENST00000525132 ZFATQ9P243 1243 aa4.79□□□□□ -1.64
CSDE1-209ENST00000525132 GDF2Q9UK05 429 aaPredicted RBP4.79□□□□□ -1.64
CSDE1-209ENST00000525132 ADAMTS8Q9UP79 889 aa4.79□□□□□ -1.64
CSDE1-209ENST00000525132 KCNH4Q9UQ05 1017 aa4.79□□□□□ -1.64
CSDE1-209ENST00000525132 C4BP0C0L5 1744 aa4.79□□□□□ -1.64
CSDE1-209ENST00000525132 NBEAQ8NFP9 2946 aa4.79□□□□□ -1.64
CSDE1-209ENST00000525132 CPDO75976 1380 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 GVINP1Q7Z2Y8 2422 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 CEP250Q9BV73 2442 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 CNOT1A5YKK6 2376 aaKnown RBP4.78□□□□□ -1.64
CSDE1-209ENST00000525132 TJP1Q07157 1748 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 WDR87Q6ZQQ6 2873 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 FER1L6Q2WGJ9 1857 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 ENO4A6NNW6 628 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 ICMTO60725 284 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 MAP3K6O95382 1288 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 NTRK1P04629 796 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 GJB1P08034 283 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 BCRP11274 1271 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 BMP4P12644 408 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 BRD2P25440 801 aaKnown RBP4.78□□□□□ -1.64
CSDE1-209ENST00000525132 IRS1P35568 1242 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 SERPINB4P48594 390 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 ARHGAP4P98171 946 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 B4GALNT3Q6L9W6 998 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 CDC37L1Q7L3B6 337 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 KIAA2013Q8IYS2 634 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 CRACR2BQ8N4Y2 399 aaPredicted RBP4.78□□□□□ -1.64
CSDE1-209ENST00000525132 GOLGA6L1Q8N7Z2 621 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 VTI1AQ96AJ9 217 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 GOLGA2P5Q9HBQ8 144 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 GGA1Q9UJY5 639 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 RTCBQ9Y3I0 505 aaKnown RBP4.78□□□□□ -1.64
CSDE1-209ENST00000525132 GJA3Q9Y6H8 435 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 GPRASP1Q5JY77 1395 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 USP47Q96K76 1375 aa4.78□□□□□ -1.64
CSDE1-209ENST00000525132 FZD6O60353 706 aa4.77□□□□□ -1.65
CSDE1-209ENST00000525132 MPSTP25325 297 aa4.77□□□□□ -1.65
CSDE1-209ENST00000525132 ADH6P28332 368 aa4.77□□□□□ -1.65
CSDE1-209ENST00000525132 ARID4AP29374 1257 aaPredicted RBP4.77□□□□□ -1.65
CSDE1-209ENST00000525132 ZAP70P43403 619 aa4.77□□□□□ -1.65
CSDE1-209ENST00000525132 PDE4CQ08493 712 aa4.77□□□□□ -1.65
CSDE1-209ENST00000525132 MTMR3Q13615 1198 aa4.77□□□□□ -1.65
CSDE1-209ENST00000525132 ADGRE1Q14246 886 aa4.77□□□□□ -1.65
CSDE1-209ENST00000525132 KRTAP21-3Q3LHN1 58 aa4.77□□□□□ -1.65
CSDE1-209ENST00000525132 ABTB2Q8N961 1025 aa4.77□□□□□ -1.65
CSDE1-209ENST00000525132 PAWRQ96IZ0 340 aaKnown RBP4.77□□□□□ -1.65
CSDE1-209ENST00000525132 PGAP2Q9UHJ9 254 aa4.77□□□□□ -1.65
CSDE1-209ENST00000525132 JAG2Q9Y219 1238 aa4.77□□□□□ -1.65
CSDE1-209ENST00000525132 STARD13Q9Y3M8 1113 aa4.77□□□□□ -1.65
CSDE1-209ENST00000525132 LRRC37A2A6NM11 1700 aa4.77□□□□□ -1.65
CSDE1-209ENST00000525132 TAF1LQ8IZX4 1826 aa4.76□□□□□ -1.65
CSDE1-209ENST00000525132 WDR17Q8IZU2 1322 aa4.76□□□□□ -1.65
CSDE1-209ENST00000525132 SPTBN2O15020 2390 aa4.76□□□□□ -1.65
CSDE1-209ENST00000525132 GYS1P13807 737 aa4.76□□□□□ -1.65
CSDE1-209ENST00000525132 EIF1AXP47813 144 aaKnown RBP4.76□□□□□ -1.65
CSDE1-209ENST00000525132 DGKGP49619 791 aa4.76□□□□□ -1.65
CSDE1-209ENST00000525132 SHHQ15465 462 aa4.76□□□□□ -1.65
CSDE1-209ENST00000525132 C20orf204Q6ZNR8 217 aa4.76□□□□□ -1.65
CSDE1-209ENST00000525132 SYT9Q86SS6 491 aa4.76□□□□□ -1.65
CSDE1-209ENST00000525132 ATCAYQ86WG3 371 aa4.76□□□□□ -1.65
CSDE1-209ENST00000525132 GJD3Q8N144 294 aa4.76□□□□□ -1.65
CSDE1-209ENST00000525132 U2AF1L4Q8WU68 220 aaKnown RBP4.76□□□□□ -1.65
CSDE1-209ENST00000525132 FSD1Q9BTV5 496 aa4.76□□□□□ -1.65
CSDE1-209ENST00000525132 CARD10Q9BWT7 1032 aa4.76□□□□□ -1.65
CSDE1-209ENST00000525132 KRTAP4-11Q9BYQ6 195 aa4.76□□□□□ -1.65
CSDE1-209ENST00000525132 GZF1Q9H116 711 aaPredicted RBP4.76□□□□□ -1.65
CSDE1-209ENST00000525132 NSFL1CQ9UNZ2 370 aaKnown RBP4.76□□□□□ -1.65
CSDE1-209ENST00000525132 USP20Q9Y2K6 914 aa4.76□□□□□ -1.65
CSDE1-209ENST00000525132 CELSR3Q9NYQ7 3312 aa4.76□□□□□ -1.65
CSDE1-209ENST00000525132 E9PCH4 1651 aa4.76□□□□□ -1.65
CSDE1-209ENST00000525132 AOX1Q06278 1338 aa4.75□□□□□ -1.65
CSDE1-209ENST00000525132 PPIP5K1Q6PFW1 1433 aa4.75□□□□□ -1.65
CSDE1-209ENST00000525132 NEURL1BA8MQ27 555 aa4.75□□□□□ -1.65
CSDE1-209ENST00000525132 ZBTB42B2RXF5 422 aa4.75□□□□□ -1.65
CSDE1-209ENST00000525132 RNF225M0QZC1 329 aaPredicted RBP4.75□□□□□ -1.65
CSDE1-209ENST00000525132 FZD9O00144 591 aa4.75□□□□□ -1.65
CSDE1-209ENST00000525132 ERC2O15083 957 aa4.75□□□□□ -1.65
CSDE1-209ENST00000525132 PDGFAP04085 211 aa4.75□□□□□ -1.65
CSDE1-209ENST00000525132 CCL5P13501 91 aa4.75□□□□□ -1.65
CSDE1-209ENST00000525132 PCBP4P57723 403 aaKnown RBP4.75□□□□□ -1.65
CSDE1-209ENST00000525132 DDR1Q08345 913 aa4.75□□□□□ -1.65
CSDE1-209ENST00000525132 ZNF211Q13398 564 aaPredicted RBP4.75□□□□□ -1.65
CSDE1-209ENST00000525132 CCINQ13939 588 aa4.75□□□□□ -1.65
CSDE1-209ENST00000525132 KIAA0319Q5VV43 1072 aa4.75□□□□□ -1.65
CSDE1-209ENST00000525132 PRPF40BQ6NWY9 871 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms