RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 EXOC6Q8TAG9 804 aa22.19■■□□□ 1.14
CAPN1-203ENST00000525013 SHISA4Q96DD7 197 aa22.19■■□□□ 1.14
CAPN1-203ENST00000525013 KANSL2Q9H9L4 492 aa22.19■■□□□ 1.14
CAPN1-203ENST00000525013 EPB41L4AQ9HCS5 686 aaPredicted RBP22.19■■□□□ 1.14
CAPN1-203ENST00000525013 TMX2Q9Y320 296 aa22.19■■□□□ 1.14
CAPN1-203ENST00000525013 SPDYE16A6NNV3 312 aaPredicted RBP22.18■■□□□ 1.14
CAPN1-203ENST00000525013 PATL2C9JE40 543 aaKnown RBP22.18■■□□□ 1.14
CAPN1-203ENST00000525013 CNMDO75829 334 aa22.18■■□□□ 1.14
CAPN1-203ENST00000525013 HMGCRP04035 888 aa22.18■■□□□ 1.14
CAPN1-203ENST00000525013 EEF2P13639 858 aaKnown RBP22.18■■□□□ 1.14
CAPN1-203ENST00000525013 PDE1AP54750 535 aa22.18■■□□□ 1.14
CAPN1-203ENST00000525013 COG2Q14746 738 aa22.18■■□□□ 1.14
CAPN1-203ENST00000525013 KIAA1755Q5JYT7 1200 aa22.18■■□□□ 1.14
CAPN1-203ENST00000525013 ZMYM1Q5SVZ6 1142 aa22.18■■□□□ 1.14
CAPN1-203ENST00000525013 B4GALNT3Q6L9W6 998 aa22.18■■□□□ 1.14
CAPN1-203ENST00000525013 GPR142Q7Z601 462 aa22.18■■□□□ 1.14
CAPN1-203ENST00000525013 PLEKHH3Q7Z736 793 aa22.18■■□□□ 1.14
CAPN1-203ENST00000525013 U2AF1L4Q8WU68 220 aaKnown RBP22.18■■□□□ 1.14
CAPN1-203ENST00000525013 SOCS4Q8WXH5 440 aa22.18■■□□□ 1.14
CAPN1-203ENST00000525013 LPAR1Q92633 364 aa22.18■■□□□ 1.14
CAPN1-203ENST00000525013 NACAP1Q9BZK3 213 aa22.18■■□□□ 1.14
CAPN1-203ENST00000525013 LNPKQ9C0E8 428 aa22.18■■□□□ 1.14
CAPN1-203ENST00000525013 HOXC10Q9NYD6 342 aa22.18■■□□□ 1.14
CAPN1-203ENST00000525013 STAP2Q9UGK3 403 aa22.18■■□□□ 1.14
CAPN1-203ENST00000525013 SAMD1Q6SPF0 538 aaPredicted RBP22.17■■□□□ 1.14
CAPN1-203ENST00000525013 LBX2Q6XYB7 198 aa22.17■■□□□ 1.14
CAPN1-203ENST00000525013 IFNL3Q8IZI9 196 aa22.17■■□□□ 1.14
CAPN1-203ENST00000525013 VCPKMTQ9H867 229 aa22.17■■□□□ 1.14
CAPN1-203ENST00000525013 BTBD7Q9P203 1132 aa22.17■■□□□ 1.14
CAPN1-203ENST00000525013 RAD21O60216 631 aa22.16■■□□□ 1.14
CAPN1-203ENST00000525013 EVI5LQ96CN4 794 aa22.16■■□□□ 1.14
CAPN1-203ENST00000525013 DEFB118Q96PH6 123 aa22.16■■□□□ 1.14
CAPN1-203ENST00000525013 FLOT1O75955 427 aa22.15■■□□□ 1.14
CAPN1-203ENST00000525013 SGPL1O95470 568 aa22.15■■□□□ 1.14
CAPN1-203ENST00000525013 TFRCP02786 760 aaKnown RBP22.15■■□□□ 1.14
CAPN1-203ENST00000525013 RASA1P20936 1047 aa22.15■■□□□ 1.14
CAPN1-203ENST00000525013 NAPBQ9H115 298 aa22.15■■□□□ 1.14
CAPN1-203ENST00000525013 ZNF287Q9HBT7 754 aa22.15■■□□□ 1.14
CAPN1-203ENST00000525013 GOPCQ9HD26 462 aa22.15■■□□□ 1.14
CAPN1-203ENST00000525013 SUPT16HQ9Y5B9 1047 aaKnown RBP22.15■■□□□ 1.14
CAPN1-203ENST00000525013 RLFQ13129 1914 aa22.15■■□□□ 1.14
CAPN1-203ENST00000525013 ROBO3Q96MS0 1386 aa22.14■■□□□ 1.14
CAPN1-203ENST00000525013 PRDM1O75626 825 aa22.14■■□□□ 1.13
CAPN1-203ENST00000525013 XRCC5P13010 732 aaKnown RBP22.14■■□□□ 1.13
CAPN1-203ENST00000525013 RGS2P41220 211 aa22.14■■□□□ 1.13
CAPN1-203ENST00000525013 TRIM32Q13049 653 aa22.14■■□□□ 1.13
CAPN1-203ENST00000525013 MORN1Q5T089 497 aa22.14■■□□□ 1.13
CAPN1-203ENST00000525013 SMC5Q8IY18 1101 aa22.14■■□□□ 1.13
CAPN1-203ENST00000525013 ZNF444Q8N0Y2 327 aaPredicted RBP22.14■■□□□ 1.13
CAPN1-203ENST00000525013 TRIB2Q92519 343 aa22.14■■□□□ 1.13
CAPN1-203ENST00000525013 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.14■■□□□ 1.13
CAPN1-203ENST00000525013 IVNS1ABPQ9Y6Y0 642 aa22.14■■□□□ 1.13
CAPN1-203ENST00000525013 WDR46O15213 610 aaKnown RBP22.13■■□□□ 1.13
CAPN1-203ENST00000525013 IGHDP01880 384 aa22.13■■□□□ 1.13
CAPN1-203ENST00000525013 CCDC129Q6ZRS4 1044 aa22.13■■□□□ 1.13
CAPN1-203ENST00000525013 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.13■■□□□ 1.13
CAPN1-203ENST00000525013 HMX1Q9NP08 348 aaPredicted RBP22.13■■□□□ 1.13
CAPN1-203ENST00000525013 PAK6Q9NQU5 681 aaPredicted RBP22.13■■□□□ 1.13
CAPN1-203ENST00000525013 GREB1LQ9C091 1923 aaPredicted RBP22.13■■□□□ 1.13
CAPN1-203ENST00000525013 MYH4Q9Y623 1939 aa22.13■■□□□ 1.13
CAPN1-203ENST00000525013 RPTORQ8N122 1335 aa22.12■■□□□ 1.13
CAPN1-203ENST00000525013 FARP2O94887 1054 aaPredicted RBP22.12■■□□□ 1.13
CAPN1-203ENST00000525013 SLC3A2P08195 630 aaKnown RBP22.12■■□□□ 1.13
CAPN1-203ENST00000525013 ZKSCAN1P17029 563 aaPredicted RBP22.12■■□□□ 1.13
CAPN1-203ENST00000525013 DSG3P32926 999 aa22.12■■□□□ 1.13
CAPN1-203ENST00000525013 PLS1Q14651 629 aa22.12■■□□□ 1.13
CAPN1-203ENST00000525013 TRMT44Q8IYL2 757 aaKnown RBP22.12■■□□□ 1.13
CAPN1-203ENST00000525013 USP6NLQ92738 828 aa22.12■■□□□ 1.13
CAPN1-203ENST00000525013 PARP14Q460N5 1801 aa22.11■■□□□ 1.13
CAPN1-203ENST00000525013 SLC15A5A6NIM6 579 aa22.11■■□□□ 1.13
CAPN1-203ENST00000525013 TRIM6-TRIM34B2RNG4 842 aa22.11■■□□□ 1.13
CAPN1-203ENST00000525013 PRKAR2AP13861 404 aaKnown RBP22.11■■□□□ 1.13
CAPN1-203ENST00000525013 PDE4BQ07343 736 aa22.11■■□□□ 1.13
CAPN1-203ENST00000525013 MAP2K5Q13163 448 aa22.11■■□□□ 1.13
CAPN1-203ENST00000525013 CCL14Q16627 93 aa22.11■■□□□ 1.13
CAPN1-203ENST00000525013 MB21D1Q8N884 522 aa22.11■■□□□ 1.13
CAPN1-203ENST00000525013 ATG4CQ96DT6 458 aa22.11■■□□□ 1.13
CAPN1-203ENST00000525013 APBA2Q99767 749 aa22.11■■□□□ 1.13
CAPN1-203ENST00000525013 MOV10L1Q9BXT6 1211 aaKnown RBP22.11■■□□□ 1.13
CAPN1-203ENST00000525013 SPATC1LQ9H0A9 340 aa22.11■■□□□ 1.13
CAPN1-203ENST00000525013 PTPREP23469 700 aa22.1■■□□□ 1.13
CAPN1-203ENST00000525013 PPARAQ07869 468 aa22.1■■□□□ 1.13
CAPN1-203ENST00000525013 CHD1LQ86WJ1 897 aa22.1■■□□□ 1.13
CAPN1-203ENST00000525013 COL11A1P12107 1806 aaPredicted RBP22.1■■□□□ 1.13
CAPN1-203ENST00000525013 NUCB1Q02818 461 aa22.09■■□□□ 1.13
CAPN1-203ENST00000525013 FAM83BQ5T0W9 1011 aa22.09■■□□□ 1.13
CAPN1-203ENST00000525013 DPF3Q92784 378 aa22.09■■□□□ 1.13
CAPN1-203ENST00000525013 RILPL2Q969X0 211 aa22.09■■□□□ 1.13
CAPN1-203ENST00000525013 FBXO28Q9NVF7 368 aa22.09■■□□□ 1.13
CAPN1-203ENST00000525013 NYAP2Q9P242 653 aa22.09■■□□□ 1.13
CAPN1-203ENST00000525013 CLIP2Q9UDT6 1046 aa22.09■■□□□ 1.13
CAPN1-203ENST00000525013 A0A0G2JMZ2 1700 aa22.09■■□□□ 1.13
CAPN1-203ENST00000525013 TSPY3P0CV98 308 aa22.08■■□□□ 1.13
CAPN1-203ENST00000525013 TSPY8P0CW00 308 aa22.08■■□□□ 1.13
CAPN1-203ENST00000525013 CAPN2P17655 700 aa22.08■■□□□ 1.13
CAPN1-203ENST00000525013 UBE2Q1Q7Z7E8 422 aa22.08■■□□□ 1.13
CAPN1-203ENST00000525013 CRISPLD2Q9H0B8 497 aa22.08■■□□□ 1.13
CAPN1-203ENST00000525013 HELLSQ9NRZ9 838 aa22.08■■□□□ 1.13
CAPN1-203ENST00000525013 ZNFX1Q9P2E3 1918 aaKnown RBP22.08■■□□□ 1.12
CAPN1-203ENST00000525013 ERCC3P19447 782 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms