RNA–Protein interactions for RNA: ENST00000524966.1

AP001001.2-201, humanhuman

TSL 3 BASIC

Gene AP001001.2, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001001.2-201ENST00000524966 MFAP1P55081 439 aaKnown RBP12.87□□□□□ -0.35
AP001001.2-201ENST00000524966 IRX3P78415 501 aaPredicted RBP12.87□□□□□ -0.35
AP001001.2-201ENST00000524966 CTDSPL2Q05D32 466 aa12.87□□□□□ -0.35
AP001001.2-201ENST00000524966 PDE4BQ07343 736 aa12.87□□□□□ -0.35
AP001001.2-201ENST00000524966 USP17L24Q0WX57 530 aa12.87□□□□□ -0.35
AP001001.2-201ENST00000524966 FAM110CQ1W6H9 321 aa12.87□□□□□ -0.35
AP001001.2-201ENST00000524966 IL25Q9H293 177 aa12.87□□□□□ -0.35
AP001001.2-201ENST00000524966 RBPJLQ9UBG7 517 aa12.87□□□□□ -0.35
AP001001.2-201ENST00000524966 MORF4L1Q9UBU8 362 aa12.87□□□□□ -0.35
AP001001.2-201ENST00000524966 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.87□□□□□ -0.35
AP001001.2-201ENST00000524966 GREB1LQ9C091 1923 aaPredicted RBP12.86□□□□□ -0.35
AP001001.2-201ENST00000524966 ZSWIM8A7E2V4 1837 aa12.86□□□□□ -0.35
AP001001.2-201ENST00000524966 PEX10O60683 326 aa12.86□□□□□ -0.35
AP001001.2-201ENST00000524966 SLC3A2P08195 630 aaKnown RBP12.86□□□□□ -0.35
AP001001.2-201ENST00000524966 CHMLP26374 656 aa12.86□□□□□ -0.35
AP001001.2-201ENST00000524966 HERVK_113P62684 666 aa12.86□□□□□ -0.35
AP001001.2-201ENST00000524966 SKAP1Q86WV1 359 aa12.86□□□□□ -0.35
AP001001.2-201ENST00000524966 NEDD1Q8NHV4 660 aa12.86□□□□□ -0.35
AP001001.2-201ENST00000524966 MKL1Q969V6 931 aa12.86□□□□□ -0.35
AP001001.2-201ENST00000524966 RPAP3Q9H6T3 665 aaPredicted RBP12.86□□□□□ -0.35
AP001001.2-201ENST00000524966 VCPKMTQ9H867 229 aa12.86□□□□□ -0.35
AP001001.2-201ENST00000524966 ARHGEF10LQ9HCE6 1279 aa12.86□□□□□ -0.35
AP001001.2-201ENST00000524966 TXNRD2Q9NNW7 524 aa12.86□□□□□ -0.35
AP001001.2-201ENST00000524966 NYAP2Q9P242 653 aa12.86□□□□□ -0.35
AP001001.2-201ENST00000524966 ZMYM6O95789 1325 aa12.86□□□□□ -0.35
AP001001.2-201ENST00000524966 CCDC85CA6NKD9 419 aa12.85□□□□□ -0.35
AP001001.2-201ENST00000524966 ECM2O94769 699 aaPredicted RBP12.85□□□□□ -0.35
AP001001.2-201ENST00000524966 FMNL1O95466 1100 aaPredicted RBP12.85□□□□□ -0.35
AP001001.2-201ENST00000524966 TFAP4Q01664 338 aa12.85□□□□□ -0.35
AP001001.2-201ENST00000524966 Q3C1V9 767 aa12.85□□□□□ -0.35
AP001001.2-201ENST00000524966 FAM47AQ5JRC9 791 aa12.85□□□□□ -0.35
AP001001.2-201ENST00000524966 LBX2Q6XYB7 198 aa12.85□□□□□ -0.35
AP001001.2-201ENST00000524966 LPAR1Q92633 364 aa12.85□□□□□ -0.35
AP001001.2-201ENST00000524966 SH2D4AQ9H788 454 aa12.85□□□□□ -0.35
AP001001.2-201ENST00000524966 MTMR4Q9NYA4 1195 aa12.85□□□□□ -0.35
AP001001.2-201ENST00000524966 SRRDQ9UH36 339 aa12.85□□□□□ -0.35
AP001001.2-201ENST00000524966 MGAMO43451 1857 aa12.85□□□□□ -0.35
AP001001.2-201ENST00000524966 RLFQ13129 1914 aa12.84□□□□□ -0.35
AP001001.2-201ENST00000524966 ORC4O43929 436 aa12.84□□□□□ -0.35
AP001001.2-201ENST00000524966 HOXD10P28358 340 aa12.84□□□□□ -0.35
AP001001.2-201ENST00000524966 PRMT2P55345 433 aa12.84□□□□□ -0.35
AP001001.2-201ENST00000524966 FCGRTP55899 365 aa12.84□□□□□ -0.35
AP001001.2-201ENST00000524966 ATP2B2Q01814 1243 aa12.84□□□□□ -0.35
AP001001.2-201ENST00000524966 COG2Q14746 738 aa12.84□□□□□ -0.35
AP001001.2-201ENST00000524966 SPICE1Q8N0Z3 855 aa12.84□□□□□ -0.35
AP001001.2-201ENST00000524966 GPRC5AQ8NFJ5 357 aa12.84□□□□□ -0.35
AP001001.2-201ENST00000524966 CEP95Q96GE4 821 aa12.84□□□□□ -0.35
AP001001.2-201ENST00000524966 CCDC136Q96JN2 1154 aa12.84□□□□□ -0.35
AP001001.2-201ENST00000524966 DSCC1Q9BVC3 393 aa12.84□□□□□ -0.35
AP001001.2-201ENST00000524966 NBPF3Q9H094 633 aa12.84□□□□□ -0.35
AP001001.2-201ENST00000524966 IL17RBQ9NRM6 502 aa12.84□□□□□ -0.35
AP001001.2-201ENST00000524966 HOXC10Q9NYD6 342 aa12.84□□□□□ -0.35
AP001001.2-201ENST00000524966 CLIP2Q9UDT6 1046 aa12.84□□□□□ -0.35
AP001001.2-201ENST00000524966 PTCH2Q9Y6C5 1203 aa12.84□□□□□ -0.35
AP001001.2-201ENST00000524966 PLIN4Q96Q06 1357 aa12.83□□□□□ -0.36
AP001001.2-201ENST00000524966 F5H6K3 240 aa12.83□□□□□ -0.36
AP001001.2-201ENST00000524966 CNMDO75829 334 aa12.83□□□□□ -0.36
AP001001.2-201ENST00000524966 TSPY3P0CV98 308 aa12.83□□□□□ -0.36
AP001001.2-201ENST00000524966 TSPY8P0CW00 308 aa12.83□□□□□ -0.36
AP001001.2-201ENST00000524966 HAND2P61296 217 aa12.83□□□□□ -0.36
AP001001.2-201ENST00000524966 KLRC3Q07444 240 aa12.83□□□□□ -0.36
AP001001.2-201ENST00000524966 GTF3C2Q8WUA4 911 aaPredicted RBP12.83□□□□□ -0.36
AP001001.2-201ENST00000524966 GJD2Q9UKL4 321 aa12.83□□□□□ -0.36
AP001001.2-201ENST00000524966 GABRQQ9UN88 632 aa12.83□□□□□ -0.36
AP001001.2-201ENST00000524966 RABGAP1Q9Y3P9 1069 aa12.83□□□□□ -0.36
AP001001.2-201ENST00000524966 SPDYE16A6NNV3 312 aaPredicted RBP12.82□□□□□ -0.36
AP001001.2-201ENST00000524966 WDR46O15213 610 aaKnown RBP12.82□□□□□ -0.36
AP001001.2-201ENST00000524966 TTLL1O95922 423 aa12.82□□□□□ -0.36
AP001001.2-201ENST00000524966 NEFLP07196 543 aa12.82□□□□□ -0.36
AP001001.2-201ENST00000524966 CENPBP07199 599 aaPredicted RBP12.82□□□□□ -0.36
AP001001.2-201ENST00000524966 NOVP48745 357 aa12.82□□□□□ -0.36
AP001001.2-201ENST00000524966 ERVK-9P63128 1117 aa12.82□□□□□ -0.36
AP001001.2-201ENST00000524966 ERVK-24P63145 666 aa12.82□□□□□ -0.36
AP001001.2-201ENST00000524966 AKNAD1Q5T1N1 836 aa12.82□□□□□ -0.36
AP001001.2-201ENST00000524966 NKX2-3Q8TAU0 364 aa12.82□□□□□ -0.36
AP001001.2-201ENST00000524966 RUFY2Q8WXA3 655 aa12.82□□□□□ -0.36
AP001001.2-201ENST00000524966 ARMC5Q96C12 935 aa12.82□□□□□ -0.36
AP001001.2-201ENST00000524966 GOPCQ9HD26 462 aa12.82□□□□□ -0.36
AP001001.2-201ENST00000524966 BTBD7Q9P203 1132 aa12.82□□□□□ -0.36
AP001001.2-201ENST00000524966 SYNPO2Q9UMS6 1093 aa12.82□□□□□ -0.36
AP001001.2-201ENST00000524966 ADAMTS5Q9UNA0 930 aa12.82□□□□□ -0.36
AP001001.2-201ENST00000524966 MYH4Q9Y623 1939 aa12.82□□□□□ -0.36
AP001001.2-201ENST00000524966 PDE4DIPQ5VU43 2346 aa12.81□□□□□ -0.36
AP001001.2-201ENST00000524966 TSPY2A6NKD2 308 aa12.81□□□□□ -0.36
AP001001.2-201ENST00000524966 ZNF213O14771 459 aa12.81□□□□□ -0.36
AP001001.2-201ENST00000524966 TNPO2O14787 897 aaKnown RBP12.81□□□□□ -0.36
AP001001.2-201ENST00000524966 SGSM2O43147 1006 aa12.81□□□□□ -0.36
AP001001.2-201ENST00000524966 RANBP6O60518 1105 aaKnown RBP12.81□□□□□ -0.36
AP001001.2-201ENST00000524966 NMT2O60551 498 aa12.81□□□□□ -0.36
AP001001.2-201ENST00000524966 NDUFB10O96000 172 aa12.81□□□□□ -0.36
AP001001.2-201ENST00000524966 PCP11498 1178 aaKnown RBP12.81□□□□□ -0.36
AP001001.2-201ENST00000524966 PRKAR2AP13861 404 aaKnown RBP12.81□□□□□ -0.36
AP001001.2-201ENST00000524966 FLT3LGP49771 235 aa12.81□□□□□ -0.36
AP001001.2-201ENST00000524966 PRKCZQ05513 592 aa12.81□□□□□ -0.36
AP001001.2-201ENST00000524966 MFSD6Q6ZSS7 791 aa12.81□□□□□ -0.36
AP001001.2-201ENST00000524966 TBC1D10CQ8IV04 446 aa12.81□□□□□ -0.36
AP001001.2-201ENST00000524966 SPDYE1Q8NFV5 336 aaPredicted RBP12.81□□□□□ -0.36
AP001001.2-201ENST00000524966 STAG1Q8WVM7 1258 aa12.81□□□□□ -0.36
AP001001.2-201ENST00000524966 PAGR1Q9BTK6 254 aa12.81□□□□□ -0.36
AP001001.2-201ENST00000524966 TANGO6Q9C0B7 1094 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms