RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 UPK3BL1B0FP48 263 aa5.07□□□□□ -1.6
CSDE1-208ENST00000524652 UPK3BL2E5RIL1 263 aa5.07□□□□□ -1.6
CSDE1-208ENST00000524652 F6X3S4 739 aa5.07□□□□□ -1.6
CSDE1-208ENST00000524652 GBP2P32456 591 aaPredicted RBP5.07□□□□□ -1.6
CSDE1-208ENST00000524652 SPOCD1Q6ZMY3 1216 aa5.07□□□□□ -1.6
CSDE1-208ENST00000524652 REC114Q7Z4M0 266 aa5.07□□□□□ -1.6
CSDE1-208ENST00000524652 CILP2Q8IUL8 1156 aa5.07□□□□□ -1.6
CSDE1-208ENST00000524652 MYLIPQ8WY64 445 aa5.07□□□□□ -1.6
CSDE1-208ENST00000524652 CCDC74BQ96LY2 380 aa5.07□□□□□ -1.6
CSDE1-208ENST00000524652 TOX2Q96NM4 488 aa5.07□□□□□ -1.6
CSDE1-208ENST00000524652 FANCD2Q9BXW9 1451 aa5.07□□□□□ -1.6
CSDE1-208ENST00000524652 HTR3BO95264 441 aa5.06□□□□□ -1.6
CSDE1-208ENST00000524652 HK2P52789 917 aa5.06□□□□□ -1.6
CSDE1-208ENST00000524652 EGR3Q06889 387 aa5.06□□□□□ -1.6
CSDE1-208ENST00000524652 CCDC27Q2M243 656 aa5.06□□□□□ -1.6
CSDE1-208ENST00000524652 SNAP47Q5SQN1 464 aa5.06□□□□□ -1.6
CSDE1-208ENST00000524652 SYDE1Q6ZW31 735 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-208ENST00000524652 PDZD8Q8NEN9 1154 aa5.06□□□□□ -1.6
CSDE1-208ENST00000524652 ADAMTS10Q9H324 1103 aa5.06□□□□□ -1.6
CSDE1-208ENST00000524652 NSUN3Q9H649 340 aaKnown RBP5.06□□□□□ -1.6
CSDE1-208ENST00000524652 KLHL3Q9UH77 587 aa5.06□□□□□ -1.6
CSDE1-208ENST00000524652 POLR3KQ9Y2Y1 108 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-208ENST00000524652 ABCC8Q09428 1581 aa5.06□□□□□ -1.6
CSDE1-208ENST00000524652 RBM47A0AV96 593 aaKnown RBP5.05□□□□□ -1.6
CSDE1-208ENST00000524652 WASH4PA8MWX3 477 aa5.05□□□□□ -1.6
CSDE1-208ENST00000524652 RBAK-RBAKDNI3L0D1 243 aa5.05□□□□□ -1.6
CSDE1-208ENST00000524652 GRIN3BO60391 1043 aa5.05□□□□□ -1.6
CSDE1-208ENST00000524652 ZGLP1P0C6A0 271 aa5.05□□□□□ -1.6
CSDE1-208ENST00000524652 LTKP29376 864 aa5.05□□□□□ -1.6
CSDE1-208ENST00000524652 TNNI2P48788 182 aa5.05□□□□□ -1.6
CSDE1-208ENST00000524652 FBLN7Q53RD9 439 aa5.05□□□□□ -1.6
CSDE1-208ENST00000524652 FAM196AQ6ZSG2 479 aa5.05□□□□□ -1.6
CSDE1-208ENST00000524652 ERMP1Q7Z2K6 904 aa5.05□□□□□ -1.6
CSDE1-208ENST00000524652 LILRA2Q8N149 483 aa5.05□□□□□ -1.6
CSDE1-208ENST00000524652 GOLM1Q8NBJ4 401 aa5.05□□□□□ -1.6
CSDE1-208ENST00000524652 SYTL4Q96C24 671 aaPredicted RBP5.05□□□□□ -1.6
CSDE1-208ENST00000524652 KREMEN1Q96MU8 473 aa5.05□□□□□ -1.6
CSDE1-208ENST00000524652 DIRC2Q96SL1 478 aa5.05□□□□□ -1.6
CSDE1-208ENST00000524652 LRRC3Q9BY71 257 aa5.05□□□□□ -1.6
CSDE1-208ENST00000524652 EPB41L4BQ9H329 900 aa5.05□□□□□ -1.6
CSDE1-208ENST00000524652 KCNQ5Q9NR82 932 aa5.05□□□□□ -1.6
CSDE1-208ENST00000524652 URB2Q14146 1524 aaKnown RBP5.05□□□□□ -1.6
CSDE1-208ENST00000524652 CEP164Q9UPV0 1460 aa5.05□□□□□ -1.6
CSDE1-208ENST00000524652 ROBO2Q9HCK4 1378 aa5.04□□□□□ -1.6
CSDE1-208ENST00000524652 FITM1A5D6W6 292 aa5.04□□□□□ -1.6
CSDE1-208ENST00000524652 NFIBO00712 420 aa5.04□□□□□ -1.6
CSDE1-208ENST00000524652 KRT1P04264 644 aa5.04□□□□□ -1.6
CSDE1-208ENST00000524652 GARTP22102 1010 aa5.04□□□□□ -1.6
CSDE1-208ENST00000524652 ERVFC1P60507 584 aa5.04□□□□□ -1.6
CSDE1-208ENST00000524652 TAGLNQ01995 201 aaKnown RBP5.04□□□□□ -1.6
CSDE1-208ENST00000524652 FAM160A1Q05DH4 1040 aa5.04□□□□□ -1.6
CSDE1-208ENST00000524652 MLECQ14165 292 aa5.04□□□□□ -1.6
CSDE1-208ENST00000524652 NR0B2Q15466 257 aa5.04□□□□□ -1.6
CSDE1-208ENST00000524652 ANKLE2Q86XL3 938 aa5.04□□□□□ -1.6
CSDE1-208ENST00000524652 PHACTR4Q8IZ21 702 aa5.04□□□□□ -1.6
CSDE1-208ENST00000524652 OXR1Q8N573 874 aa5.04□□□□□ -1.6
CSDE1-208ENST00000524652 DHX38Q92620 1227 aaKnown RBP5.04□□□□□ -1.6
CSDE1-208ENST00000524652 SP110Q9HB58 689 aa5.04□□□□□ -1.6
CSDE1-208ENST00000524652 DCP1AQ9NPI6 582 aaPredicted RBP5.04□□□□□ -1.6
CSDE1-208ENST00000524652 KBTBD4Q9NVX7 518 aa5.04□□□□□ -1.6
CSDE1-208ENST00000524652 PCDHA11Q9Y5I1 949 aa5.04□□□□□ -1.6
CSDE1-208ENST00000524652 ERCC6Q03468 1493 aa5.04□□□□□ -1.6
CSDE1-208ENST00000524652 PDS5BQ9NTI5 1447 aa5.04□□□□□ -1.6
CSDE1-208ENST00000524652 SYNJ1O43426 1573 aa5.04□□□□□ -1.6
CSDE1-208ENST00000524652 WDR62O43379 1518 aa5.03□□□□□ -1.6
CSDE1-208ENST00000524652 CUX1P39880 1505 aa5.03□□□□□ -1.6
CSDE1-208ENST00000524652 MINDY4BA8MYZ0 360 aa5.03□□□□□ -1.6
CSDE1-208ENST00000524652 CHURC1-FNTBB4DL54 471 aa5.03□□□□□ -1.6
CSDE1-208ENST00000524652 DNAJA2O60884 412 aa5.03□□□□□ -1.6
CSDE1-208ENST00000524652 LRRN2O75325 713 aa5.03□□□□□ -1.6
CSDE1-208ENST00000524652 MED14OSP0DP75 135 aa5.03□□□□□ -1.6
CSDE1-208ENST00000524652 CFPP27918 469 aa5.03□□□□□ -1.6
CSDE1-208ENST00000524652 CHRNEQ04844 493 aa5.03□□□□□ -1.6
CSDE1-208ENST00000524652 CWF19L2Q2TBE0 894 aaKnown RBP5.03□□□□□ -1.6
CSDE1-208ENST00000524652 ZSCAN18Q8TBC5 510 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-208ENST00000524652 BAHD1Q8TBE0 780 aaPredicted RBP5.03□□□□□ -1.6
CSDE1-208ENST00000524652 VWCEQ96DN2 955 aa5.03□□□□□ -1.6
CSDE1-208ENST00000524652 SUPT16HQ9Y5B9 1047 aaKnown RBP5.03□□□□□ -1.6
CSDE1-208ENST00000524652 BIVM-ERCC5R4GMW8 1640 aa5.03□□□□□ -1.6
CSDE1-208ENST00000524652 MRC2Q9UBG0 1479 aa5.02□□□□□ -1.61
CSDE1-208ENST00000524652 SHISA3A0PJX4 238 aa5.02□□□□□ -1.61
CSDE1-208ENST00000524652 RGS13O14921 159 aa5.02□□□□□ -1.61
CSDE1-208ENST00000524652 ATE1O95260 518 aa5.02□□□□□ -1.61
CSDE1-208ENST00000524652 C1QTNF9P0C862 333 aa5.02□□□□□ -1.61
CSDE1-208ENST00000524652 GLDCP23378 1020 aa5.02□□□□□ -1.61
CSDE1-208ENST00000524652 GBP1P32455 592 aa5.02□□□□□ -1.61
CSDE1-208ENST00000524652 RNF4P78317 190 aa5.02□□□□□ -1.61
CSDE1-208ENST00000524652 DUSP4Q13115 394 aa5.02□□□□□ -1.61
CSDE1-208ENST00000524652 FBXL19Q6PCT2 694 aa5.02□□□□□ -1.61
CSDE1-208ENST00000524652 C1QL4Q86Z23 238 aa5.02□□□□□ -1.61
CSDE1-208ENST00000524652 IRF2BP1Q8IU81 584 aa5.02□□□□□ -1.61
CSDE1-208ENST00000524652 LRRC56Q8IYG6 542 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-208ENST00000524652 FBXO27Q8NI29 283 aa5.02□□□□□ -1.61
CSDE1-208ENST00000524652 ENOX1Q8TC92 643 aaKnown RBP5.02□□□□□ -1.61
CSDE1-208ENST00000524652 SLC26A8Q96RN1 970 aa5.02□□□□□ -1.61
CSDE1-208ENST00000524652 RNF32Q9H0A6 362 aa5.02□□□□□ -1.61
CSDE1-208ENST00000524652 SLC6A17Q9H1V8 727 aa5.02□□□□□ -1.61
CSDE1-208ENST00000524652 CWC22Q9HCG8 908 aaKnown RBP5.02□□□□□ -1.61
CSDE1-208ENST00000524652 CD320Q9NPF0 282 aa5.02□□□□□ -1.61
CSDE1-208ENST00000524652 GMIPQ9P107 970 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 311.1 ms