RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 KANSL2Q9H9L4 492 aa11.48□□□□□ -0.57
VPS13B-212ENST00000524330 DDX4Q9NQI0 724 aaKnown RBP11.48□□□□□ -0.57
VPS13B-212ENST00000524330 KCNQ5Q9NR82 932 aa11.48□□□□□ -0.57
VPS13B-212ENST00000524330 MTMR4Q9NYA4 1195 aa11.48□□□□□ -0.57
VPS13B-212ENST00000524330 TMEM63CQ9P1W3 806 aa11.48□□□□□ -0.57
VPS13B-212ENST00000524330 BCS1LQ9Y276 419 aa11.48□□□□□ -0.57
VPS13B-212ENST00000524330 CNTNAP5Q8WYK1 1306 aa11.48□□□□□ -0.57
VPS13B-212ENST00000524330 ATRNL1Q5VV63 1379 aa11.47□□□□□ -0.57
VPS13B-212ENST00000524330 SYCE3A1L190 88 aa11.47□□□□□ -0.57
VPS13B-212ENST00000524330 PALM3A6NDB9 673 aaPredicted RBP11.47□□□□□ -0.57
VPS13B-212ENST00000524330 SPDYE2BA6NHP3 402 aa11.47□□□□□ -0.57
VPS13B-212ENST00000524330 SMIM22K7EJ46 135 aa11.47□□□□□ -0.57
VPS13B-212ENST00000524330 PLEKHA8P1O95397 391 aa11.47□□□□□ -0.57
VPS13B-212ENST00000524330 SPDYE6P0CI01 402 aa11.47□□□□□ -0.57
VPS13B-212ENST00000524330 CCDC192P0DO97 292 aa11.47□□□□□ -0.57
VPS13B-212ENST00000524330 TRAPPC10P48553 1259 aa11.47□□□□□ -0.57
VPS13B-212ENST00000524330 NOVP48745 357 aa11.47□□□□□ -0.57
VPS13B-212ENST00000524330 TCP10Q12799 353 aa11.47□□□□□ -0.57
VPS13B-212ENST00000524330 TRAF1Q13077 416 aa11.47□□□□□ -0.57
VPS13B-212ENST00000524330 TNFAIP1Q13829 316 aa11.47□□□□□ -0.57
VPS13B-212ENST00000524330 SLC39A14Q15043 492 aa11.47□□□□□ -0.57
VPS13B-212ENST00000524330 ZRSR1Q15695 479 aaKnown RBP11.47□□□□□ -0.57
VPS13B-212ENST00000524330 MAP3K11Q16584 847 aa11.47□□□□□ -0.57
VPS13B-212ENST00000524330 GPATCH4Q5T3I0 446 aaKnown RBP11.47□□□□□ -0.57
VPS13B-212ENST00000524330 RBM26Q5T8P6 1007 aaKnown RBP11.47□□□□□ -0.57
VPS13B-212ENST00000524330 TMEM179Q6ZVK1 233 aa11.47□□□□□ -0.57
VPS13B-212ENST00000524330 CCAR1Q8IX12 1150 aaKnown RBP11.47□□□□□ -0.57
VPS13B-212ENST00000524330 SRBD1Q8N5C6 995 aaKnown RBP11.47□□□□□ -0.57
VPS13B-212ENST00000524330 LINC00301Q8NCQ3 95 aa11.47□□□□□ -0.57
VPS13B-212ENST00000524330 FAM151AQ8WW52 585 aa11.47□□□□□ -0.57
VPS13B-212ENST00000524330 CEP95Q96GE4 821 aa11.47□□□□□ -0.57
VPS13B-212ENST00000524330 TDRD3Q9H7E2 651 aaKnown RBP11.47□□□□□ -0.57
VPS13B-212ENST00000524330 SPON1Q9HCB6 807 aa11.47□□□□□ -0.57
VPS13B-212ENST00000524330 HOOK1Q9UJC3 728 aaKnown RBP11.47□□□□□ -0.57
VPS13B-212ENST00000524330 SYNPO2Q9UMS6 1093 aa11.47□□□□□ -0.57
VPS13B-212ENST00000524330 EP400Q96L91 3159 aa11.47□□□□□ -0.57
VPS13B-212ENST00000524330 KLRF2D3W0D1 207 aa11.46□□□□□ -0.57
VPS13B-212ENST00000524330 CUTAO60888 179 aa11.46□□□□□ -0.57
VPS13B-212ENST00000524330 CAVIN2O95810 425 aa11.46□□□□□ -0.57
VPS13B-212ENST00000524330 GNA11P29992 359 aa11.46□□□□□ -0.57
VPS13B-212ENST00000524330 FUT2Q10981 343 aa11.46□□□□□ -0.57
VPS13B-212ENST00000524330 SPDYE2Q495Y8 402 aa11.46□□□□□ -0.57
VPS13B-212ENST00000524330 TPRNQ4KMQ1 711 aa11.46□□□□□ -0.57
VPS13B-212ENST00000524330 FAM83AQ86UY5 434 aa11.46□□□□□ -0.57
VPS13B-212ENST00000524330 FSIP1Q8NA03 581 aa11.46□□□□□ -0.57
VPS13B-212ENST00000524330 HOOK2Q96ED9 719 aa11.46□□□□□ -0.57
VPS13B-212ENST00000524330 AIFM3Q96NN9 605 aa11.46□□□□□ -0.57
VPS13B-212ENST00000524330 GMLQ99445 158 aa11.46□□□□□ -0.57
VPS13B-212ENST00000524330 PHF20Q9BVI0 1012 aa11.46□□□□□ -0.57
VPS13B-212ENST00000524330 GLT8D2Q9H1C3 349 aa11.46□□□□□ -0.57
VPS13B-212ENST00000524330 C6orf50Q9HD87 102 aa11.46□□□□□ -0.57
VPS13B-212ENST00000524330 FAM13BQ9NYF5 915 aa11.46□□□□□ -0.57
VPS13B-212ENST00000524330 NYAP2Q9P242 653 aa11.46□□□□□ -0.57
VPS13B-212ENST00000524330 ZNF70Q9UC06 446 aaPredicted RBP11.46□□□□□ -0.57
VPS13B-212ENST00000524330 CLIP2Q9UDT6 1046 aa11.46□□□□□ -0.57
VPS13B-212ENST00000524330 MORC2Q9Y6X9 1032 aaPredicted RBP11.46□□□□□ -0.57
VPS13B-212ENST00000524330 SCN9AQ15858 1988 aa11.46□□□□□ -0.58
VPS13B-212ENST00000524330 IGKV6D-41A0A0C4DH26 115 aa11.45□□□□□ -0.58
VPS13B-212ENST00000524330 TRIM75PA6NK02 468 aa11.45□□□□□ -0.58
VPS13B-212ENST00000524330 BTBD18B2RXH4 712 aa11.45□□□□□ -0.58
VPS13B-212ENST00000524330 AKR1B1P15121 316 aa11.45□□□□□ -0.58
VPS13B-212ENST00000524330 SHMT1P34896 483 aa11.45□□□□□ -0.58
VPS13B-212ENST00000524330 ATP2B2Q01814 1243 aa11.45□□□□□ -0.58
VPS13B-212ENST00000524330 EVX2Q03828 476 aa11.45□□□□□ -0.58
VPS13B-212ENST00000524330 FAM160A1Q05DH4 1040 aa11.45□□□□□ -0.58
VPS13B-212ENST00000524330 NFIAQ12857 509 aa11.45□□□□□ -0.58
VPS13B-212ENST00000524330 PKN1Q16512 942 aa11.45□□□□□ -0.58
VPS13B-212ENST00000524330 ABCB5Q2M3G0 1257 aa11.45□□□□□ -0.58
VPS13B-212ENST00000524330 UVSSAQ2YD98 709 aa11.45□□□□□ -0.58
VPS13B-212ENST00000524330 TATDN1Q6P1N9 297 aa11.45□□□□□ -0.58
VPS13B-212ENST00000524330 SASS6Q6UVJ0 657 aa11.45□□□□□ -0.58
VPS13B-212ENST00000524330 CMTR1Q8N1G2 835 aaKnown RBP11.45□□□□□ -0.58
VPS13B-212ENST00000524330 DCAF4Q8WV16 495 aa11.45□□□□□ -0.58
VPS13B-212ENST00000524330 PRMT6Q96LA8 375 aaPredicted RBP11.45□□□□□ -0.58
VPS13B-212ENST00000524330 CSRNP1Q96S65 589 aa11.45□□□□□ -0.58
VPS13B-212ENST00000524330 PYM1Q9BRP8 204 aaKnown RBP11.45□□□□□ -0.58
VPS13B-212ENST00000524330 CLSTN2Q9H4D0 955 aa11.45□□□□□ -0.58
VPS13B-212ENST00000524330 SH2D4AQ9H788 454 aa11.45□□□□□ -0.58
VPS13B-212ENST00000524330 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.45□□□□□ -0.58
VPS13B-212ENST00000524330 VPS54Q9P1Q0 977 aa11.45□□□□□ -0.58
VPS13B-212ENST00000524330 FAM198AQ9UFP1 575 aa11.45□□□□□ -0.58
VPS13B-212ENST00000524330 MAD2L2Q9UI95 211 aa11.45□□□□□ -0.58
VPS13B-212ENST00000524330 KCNJ14Q9UNX9 436 aa11.45□□□□□ -0.58
VPS13B-212ENST00000524330 MTMR7Q9Y216 660 aa11.45□□□□□ -0.58
VPS13B-212ENST00000524330 CCDC194A0A1B0GVG4 234 aa11.44□□□□□ -0.58
VPS13B-212ENST00000524330 KIF28PB7ZC32 967 aa11.44□□□□□ -0.58
VPS13B-212ENST00000524330 CMA1P23946 247 aa11.44□□□□□ -0.58
VPS13B-212ENST00000524330 GUCY1A2P33402 732 aa11.44□□□□□ -0.58
VPS13B-212ENST00000524330 CXCL9Q07325 125 aa11.44□□□□□ -0.58
VPS13B-212ENST00000524330 CCDC96Q2M329 555 aa11.44□□□□□ -0.58
VPS13B-212ENST00000524330 PPP1R18Q6NYC8 613 aa11.44□□□□□ -0.58
VPS13B-212ENST00000524330 ILDR1Q86SU0 546 aaPredicted RBP11.44□□□□□ -0.58
VPS13B-212ENST00000524330 METTL16Q86W50 562 aaKnown RBP11.44□□□□□ -0.58
VPS13B-212ENST00000524330 BLIDQ8IZY5 108 aa11.44□□□□□ -0.58
VPS13B-212ENST00000524330 KRI1Q8N9T8 703 aaKnown RBP11.44□□□□□ -0.58
VPS13B-212ENST00000524330 DAGLBQ8NCG7 672 aa11.44□□□□□ -0.58
VPS13B-212ENST00000524330 DPF2Q92785 391 aa11.44□□□□□ -0.58
VPS13B-212ENST00000524330 MKL1Q969V6 931 aa11.44□□□□□ -0.58
VPS13B-212ENST00000524330 PGBD1Q96JS3 809 aa11.44□□□□□ -0.58
VPS13B-212ENST00000524330 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms