RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	HCN4	Q9Y3Q4	1203 aa		13.25	□□□□□ -0.29
SORBS3-222	ENST00000524057	CHD9	Q3L8U1	2897 aa		13.24	□□□□□ -0.29
SORBS3-222	ENST00000524057	STRN	O43815	780 aa		13.24	□□□□□ -0.29
SORBS3-222	ENST00000524057	ADORA2A	P29274	412 aa		13.24	□□□□□ -0.29
SORBS3-222	ENST00000524057	MTX1	Q13505	466 aa		13.24	□□□□□ -0.29
SORBS3-222	ENST00000524057	ZYX	Q15942	572 aa	Known RBP	13.24	□□□□□ -0.29
SORBS3-222	ENST00000524057	CCDC129	Q6ZRS4	1044 aa		13.24	□□□□□ -0.29
SORBS3-222	ENST00000524057	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.24	□□□□□ -0.29
SORBS3-222	ENST00000524057	SLC44A5	Q8NCS7	719 aa		13.24	□□□□□ -0.29
SORBS3-222	ENST00000524057	XAGE2	Q96GT9	111 aa		13.24	□□□□□ -0.29
SORBS3-222	ENST00000524057	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.24	□□□□□ -0.29
SORBS3-222	ENST00000524057	HMG20B	Q9P0W2	317 aa		13.24	□□□□□ -0.29
SORBS3-222	ENST00000524057	PALD1	Q9ULE6	856 aa		13.24	□□□□□ -0.29
SORBS3-222	ENST00000524057	PA2G4	Q9UQ80	394 aa	Known RBP	13.24	□□□□□ -0.29
SORBS3-222	ENST00000524057	PNMA6E	A0A0J9YXQ4	647 aa		13.23	□□□□□ -0.29
SORBS3-222	ENST00000524057	TIMP1	P01033	207 aa		13.23	□□□□□ -0.29
SORBS3-222	ENST00000524057	TFF2	Q03403	129 aa		13.23	□□□□□ -0.29
SORBS3-222	ENST00000524057	RASIP1	Q5U651	963 aa		13.23	□□□□□ -0.29
SORBS3-222	ENST00000524057	PI16	Q6UXB8	463 aa		13.23	□□□□□ -0.29
SORBS3-222	ENST00000524057	MAPKAPK5	Q8IW41	473 aa		13.23	□□□□□ -0.29
SORBS3-222	ENST00000524057	TGFBRAP1	Q8WUH2	860 aa		13.23	□□□□□ -0.29
SORBS3-222	ENST00000524057	TOX2	Q96NM4	488 aa		13.23	□□□□□ -0.29
SORBS3-222	ENST00000524057	RAI14	Q9P0K7	980 aa		13.23	□□□□□ -0.29
SORBS3-222	ENST00000524057	TCF20	Q9UGU0	1960 aa	Known RBP	13.22	□□□□□ -0.29
SORBS3-222	ENST00000524057	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.22	□□□□□ -0.29
SORBS3-222	ENST00000524057	GH2	P01242	217 aa		13.22	□□□□□ -0.29
SORBS3-222	ENST00000524057	TMEM240	Q5SV17	173 aa		13.22	□□□□□ -0.29
SORBS3-222	ENST00000524057	ANKRD33	Q7Z3H0	272 aa		13.22	□□□□□ -0.29
SORBS3-222	ENST00000524057	ALYREF	Q86V81	257 aa	Known RBP	13.22	□□□□□ -0.29
SORBS3-222	ENST00000524057	SPATA5	Q8NB90	893 aa		13.22	□□□□□ -0.29
SORBS3-222	ENST00000524057	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.22	□□□□□ -0.29
SORBS3-222	ENST00000524057	TRIM34	Q9BYJ4	488 aa		13.22	□□□□□ -0.29
SORBS3-222	ENST00000524057	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.22	□□□□□ -0.29
SORBS3-222	ENST00000524057	C1orf115	Q9H7X2	142 aa		13.22	□□□□□ -0.29
SORBS3-222	ENST00000524057	XPNPEP3	Q9NQH7	507 aa		13.22	□□□□□ -0.29
SORBS3-222	ENST00000524057	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
SORBS3-222	ENST00000524057	SIPA1L1	O43166	1804 aa		13.21	□□□□□ -0.29
SORBS3-222	ENST00000524057	REV3L	O60673	3130 aa		13.21	□□□□□ -0.29
SORBS3-222	ENST00000524057		A0A1B0GUL7	405 aa		13.21	□□□□□ -0.29
SORBS3-222	ENST00000524057		A0A1W2PQ45	241 aa	Predicted RBP	13.21	□□□□□ -0.29
SORBS3-222	ENST00000524057		A0A1W2PQY0	241 aa		13.21	□□□□□ -0.29
SORBS3-222	ENST00000524057	PGK1	P00558	417 aa		13.21	□□□□□ -0.29
SORBS3-222	ENST00000524057	VCAM1	P19320	739 aa		13.21	□□□□□ -0.29
SORBS3-222	ENST00000524057	KCNQ1	P51787	676 aa		13.21	□□□□□ -0.29
SORBS3-222	ENST00000524057	USP14	P54578	494 aa		13.21	□□□□□ -0.29
SORBS3-222	ENST00000524057	TMEM31	Q5JXX7	168 aa		13.21	□□□□□ -0.29
SORBS3-222	ENST00000524057	MFSD5	Q6N075	450 aa		13.21	□□□□□ -0.29
SORBS3-222	ENST00000524057	ACER1	Q8TDN7	264 aa		13.21	□□□□□ -0.29
SORBS3-222	ENST00000524057	COPRS	Q9NQ92	184 aa		13.21	□□□□□ -0.29
SORBS3-222	ENST00000524057	DCDC2C	A8MYV0	355 aa		13.2	□□□□□ -0.3
SORBS3-222	ENST00000524057	BAG3	O95817	575 aa		13.2	□□□□□ -0.3
SORBS3-222	ENST00000524057	RARB	P10826	455 aa		13.2	□□□□□ -0.3
SORBS3-222	ENST00000524057	ERCC3	P19447	782 aa		13.2	□□□□□ -0.3
SORBS3-222	ENST00000524057	PPP4C	P60510	307 aa		13.2	□□□□□ -0.3
SORBS3-222	ENST00000524057	MVP	Q14764	893 aa	Known RBP	13.2	□□□□□ -0.3
SORBS3-222	ENST00000524057	ZNF365	Q70YC5	407 aa		13.2	□□□□□ -0.3
SORBS3-222	ENST00000524057	RNF180	Q86T96	592 aa		13.2	□□□□□ -0.3
SORBS3-222	ENST00000524057	MAML3	Q96JK9	1138 aa		13.2	□□□□□ -0.3
SORBS3-222	ENST00000524057	FEZ1	Q99689	392 aa		13.2	□□□□□ -0.3
SORBS3-222	ENST00000524057	KIAA1683	Q9H0B3	1180 aa		13.2	□□□□□ -0.3
SORBS3-222	ENST00000524057	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.2	□□□□□ -0.3
SORBS3-222	ENST00000524057	PLXNA1	Q9UIW2	1896 aa		13.2	□□□□□ -0.3
SORBS3-222	ENST00000524057	FLT1	P17948	1338 aa		13.19	□□□□□ -0.3
SORBS3-222	ENST00000524057	CENPB	P07199	599 aa	Predicted RBP	13.19	□□□□□ -0.3
SORBS3-222	ENST00000524057	GNAI3	P08754	354 aa		13.19	□□□□□ -0.3
SORBS3-222	ENST00000524057	ACR	P10323	421 aa		13.19	□□□□□ -0.3
SORBS3-222	ENST00000524057	TFCP2	Q12800	502 aa		13.19	□□□□□ -0.3
SORBS3-222	ENST00000524057	POLA2	Q14181	598 aa		13.19	□□□□□ -0.3
SORBS3-222	ENST00000524057	COG2	Q14746	738 aa		13.19	□□□□□ -0.3
SORBS3-222	ENST00000524057	TATDN1	Q6P1N9	297 aa		13.19	□□□□□ -0.3
SORBS3-222	ENST00000524057	NEUROD6	Q96NK8	337 aa		13.19	□□□□□ -0.3
SORBS3-222	ENST00000524057	NOL10	Q9BSC4	688 aa	Known RBP	13.19	□□□□□ -0.3
SORBS3-222	ENST00000524057	SPATC1L	Q9H0A9	340 aa		13.19	□□□□□ -0.3
SORBS3-222	ENST00000524057	NKX2-4	Q9H2Z4	354 aa		13.19	□□□□□ -0.3
SORBS3-222	ENST00000524057	C11orf16	Q9NQ32	467 aa		13.19	□□□□□ -0.3
SORBS3-222	ENST00000524057	SLC5A4	Q9NY91	659 aa		13.19	□□□□□ -0.3
SORBS3-222	ENST00000524057	HOXC10	Q9NYD6	342 aa		13.19	□□□□□ -0.3
SORBS3-222	ENST00000524057	LRP2BP	Q9P2M1	347 aa		13.19	□□□□□ -0.3
SORBS3-222	ENST00000524057	SAP30BP	Q9UHR5	308 aa	Known RBP	13.19	□□□□□ -0.3
SORBS3-222	ENST00000524057	MSRA	Q9UJ68	235 aa		13.19	□□□□□ -0.3
SORBS3-222	ENST00000524057	TBX21	Q9UL17	535 aa		13.19	□□□□□ -0.3
SORBS3-222	ENST00000524057	AKAP2	Q9Y2D5	859 aa		13.19	□□□□□ -0.3
SORBS3-222	ENST00000524057	COG6	Q9Y2V7	657 aa		13.19	□□□□□ -0.3
SORBS3-222	ENST00000524057	MYO9B	Q13459	2157 aa		13.19	□□□□□ -0.3
SORBS3-222	ENST00000524057	GPR37L1	O60883	481 aa		13.18	□□□□□ -0.3
SORBS3-222	ENST00000524057	GNAI2	P04899	355 aa		13.18	□□□□□ -0.3
SORBS3-222	ENST00000524057	CSF2RA	P15509	400 aa		13.18	□□□□□ -0.3
SORBS3-222	ENST00000524057	PPIG	Q13427	754 aa	Known RBP eCLIP	13.18	□□□□□ -0.3	9e-10	■■□□□ 12.4
SORBS3-222	ENST00000524057	RAB3GAP1	Q15042	981 aa		13.18	□□□□□ -0.3
SORBS3-222	ENST00000524057	RAB30	Q15771	203 aa		13.18	□□□□□ -0.3
SORBS3-222	ENST00000524057	AAK1	Q2M2I8	961 aa		13.18	□□□□□ -0.3
SORBS3-222	ENST00000524057	ADGRA1	Q86SQ6	560 aa		13.18	□□□□□ -0.3
SORBS3-222	ENST00000524057	ITPRIP	Q8IWB1	547 aa		13.18	□□□□□ -0.3
SORBS3-222	ENST00000524057	SIRT2	Q8IXJ6	389 aa		13.18	□□□□□ -0.3
SORBS3-222	ENST00000524057	SHCBP1	Q8NEM2	672 aa		13.18	□□□□□ -0.3
SORBS3-222	ENST00000524057	SLC28A3	Q9HAS3	691 aa		13.18	□□□□□ -0.3
SORBS3-222	ENST00000524057	STARD7	Q9NQZ5	370 aa		13.18	□□□□□ -0.3
SORBS3-222	ENST00000524057	YBX2	Q9Y2T7	364 aa	Known RBP	13.18	□□□□□ -0.3
SORBS3-222	ENST00000524057	SMCHD1	A6NHR9	2005 aa		13.18	□□□□□ -0.3
SORBS3-222	ENST00000524057	ERC2	O15083	957 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms