RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 FAM47AQ5JRC9 791 aa12.88□□□□□ -0.35
TNPO1-213ENST00000523768 SPATA1Q5VX52 437 aa12.88□□□□□ -0.35
TNPO1-213ENST00000523768 SPTY2D1Q68D10 685 aaPredicted RBP12.88□□□□□ -0.35
TNPO1-213ENST00000523768 RCSD1Q6JBY9 416 aa12.88□□□□□ -0.35
TNPO1-213ENST00000523768 HOMER1Q86YM7 354 aa12.88□□□□□ -0.35
TNPO1-213ENST00000523768 TC2NQ8N9U0 490 aa12.88□□□□□ -0.35
TNPO1-213ENST00000523768 ZNF397Q8NF99 534 aaPredicted RBP12.88□□□□□ -0.35
TNPO1-213ENST00000523768 CYP2D6P10635 497 aa12.88□□□□□ -0.35
TNPO1-213ENST00000523768 KIF5BP33176 963 aa12.88□□□□□ -0.35
TNPO1-213ENST00000523768 CBX1P83916 185 aa12.88□□□□□ -0.35
TNPO1-213ENST00000523768 PTGDRQ13258 359 aa12.88□□□□□ -0.35
TNPO1-213ENST00000523768 SMIM5Q71RC9 77 aa12.88□□□□□ -0.35
TNPO1-213ENST00000523768 BAG1Q99933 345 aaPredicted RBP12.88□□□□□ -0.35
TNPO1-213ENST00000523768 MKRN1Q9UHC7 482 aaKnown RBP12.88□□□□□ -0.35
TNPO1-213ENST00000523768 CCDC88AQ3V6T2 1871 aa12.87□□□□□ -0.35
TNPO1-213ENST00000523768 TSPY2A6NKD2 308 aa12.87□□□□□ -0.35
TNPO1-213ENST00000523768 ZPR1O75312 459 aa12.87□□□□□ -0.35
TNPO1-213ENST00000523768 AFMP43652 599 aa12.87□□□□□ -0.35
TNPO1-213ENST00000523768 NLRP5P59047 1200 aa12.87□□□□□ -0.35
TNPO1-213ENST00000523768 GOLGA8FQ08AF8 430 aa12.87□□□□□ -0.35
TNPO1-213ENST00000523768 GOLGA8DPQ0D2H9 430 aa12.87□□□□□ -0.35
TNPO1-213ENST00000523768 HSP90AA4PQ58FG1 418 aa12.87□□□□□ -0.35
TNPO1-213ENST00000523768 APTXQ7Z2E3 356 aaKnown RBP12.87□□□□□ -0.35
TNPO1-213ENST00000523768 ANKS1AQ92625 1134 aa12.87□□□□□ -0.35
TNPO1-213ENST00000523768 PYM1Q9BRP8 204 aaKnown RBP12.87□□□□□ -0.35
TNPO1-213ENST00000523768 OGFRQ9NZT2 677 aa12.87□□□□□ -0.35
TNPO1-213ENST00000523768 GOLGA6L9A6NEM1 432 aa12.87□□□□□ -0.35
TNPO1-213ENST00000523768 VPS72Q15906 364 aa12.87□□□□□ -0.35
TNPO1-213ENST00000523768 E2F4Q16254 413 aa12.87□□□□□ -0.35
TNPO1-213ENST00000523768 PTPN21Q16825 1174 aa12.87□□□□□ -0.35
TNPO1-213ENST00000523768 TXNRD3Q86VQ6 643 aa12.87□□□□□ -0.35
TNPO1-213ENST00000523768 DGKHQ86XP1 1220 aa12.87□□□□□ -0.35
TNPO1-213ENST00000523768 ZMYND15Q9H091 742 aa12.87□□□□□ -0.35
TNPO1-213ENST00000523768 CD44P16070 742 aaKnown RBP12.86□□□□□ -0.35
TNPO1-213ENST00000523768 CALML3P27482 149 aa12.86□□□□□ -0.35
TNPO1-213ENST00000523768 C12orf60Q5U649 245 aa12.86□□□□□ -0.35
TNPO1-213ENST00000523768 SH3GLB2Q9NR46 395 aa12.86□□□□□ -0.35
TNPO1-213ENST00000523768 MCM9Q9NXL9 1143 aa12.86□□□□□ -0.35
TNPO1-213ENST00000523768 DDX41Q9UJV9 622 aaKnown RBP12.86□□□□□ -0.35
TNPO1-213ENST00000523768 PPP2R2CQ9Y2T4 447 aa12.86□□□□□ -0.35
TNPO1-213ENST00000523768 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.86□□□□□ -0.35
TNPO1-213ENST00000523768 VWA3AA6NCI4 1184 aa12.86□□□□□ -0.35
TNPO1-213ENST00000523768 PPP1R3GB7ZBB8 358 aa12.86□□□□□ -0.35
TNPO1-213ENST00000523768 ELF2Q15723 593 aa12.86□□□□□ -0.35
TNPO1-213ENST00000523768 CDKAL1Q5VV42 579 aa12.86□□□□□ -0.35
TNPO1-213ENST00000523768 PIK3AP1Q6ZUJ8 805 aa12.86□□□□□ -0.35
TNPO1-213ENST00000523768 DZIP1Q86YF9 867 aaKnown RBP12.86□□□□□ -0.35
TNPO1-213ENST00000523768 IQUBQ8NA54 791 aa12.86□□□□□ -0.35
TNPO1-213ENST00000523768 DNAI1Q9UI46 699 aa12.86□□□□□ -0.35
TNPO1-213ENST00000523768 SYNRGQ9UMZ2 1314 aa12.85□□□□□ -0.35
TNPO1-213ENST00000523768 SPDYE4A6NLX3 237 aa12.85□□□□□ -0.35
TNPO1-213ENST00000523768 GNPATO15228 680 aa12.85□□□□□ -0.35
TNPO1-213ENST00000523768 KMT5BQ4FZB7 885 aa12.85□□□□□ -0.35
TNPO1-213ENST00000523768 ARL6IP4Q66PJ3 421 aaKnown RBP12.85□□□□□ -0.35
TNPO1-213ENST00000523768 PTF1AQ7RTS3 328 aa12.85□□□□□ -0.35
TNPO1-213ENST00000523768 WDR66Q8TBY9 1149 aa12.85□□□□□ -0.35
TNPO1-213ENST00000523768 SRRTQ9BXP5 876 aaKnown RBP12.85□□□□□ -0.35
TNPO1-213ENST00000523768 BCL11BQ9C0K0 894 aaPredicted RBP12.85□□□□□ -0.35
TNPO1-213ENST00000523768 RTCBQ9Y3I0 505 aaKnown RBP12.85□□□□□ -0.35
TNPO1-213ENST00000523768 ROBO3Q96MS0 1386 aa12.85□□□□□ -0.35
TNPO1-213ENST00000523768 USP17L8P0C7I0 530 aa12.85□□□□□ -0.35
TNPO1-213ENST00000523768 VEGFAP15692 232 aaPredicted RBP12.85□□□□□ -0.35
TNPO1-213ENST00000523768 PBX1P40424 430 aa12.85□□□□□ -0.35
TNPO1-213ENST00000523768 CCDC178Q5BJE1 867 aa12.85□□□□□ -0.35
TNPO1-213ENST00000523768 CTAGE1Q96RT6 745 aa12.85□□□□□ -0.35
TNPO1-213ENST00000523768 KAT14Q9H8E8 782 aa12.85□□□□□ -0.35
TNPO1-213ENST00000523768 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.85□□□□□ -0.35
TNPO1-213ENST00000523768 LEMD3Q9Y2U8 911 aa12.85□□□□□ -0.35
TNPO1-213ENST00000523768 V9GYY5 206 aaPredicted RBP12.85□□□□□ -0.35
TNPO1-213ENST00000523768 XDHP47989 1333 aa12.84□□□□□ -0.35
TNPO1-213ENST00000523768 CASP1P29466 404 aa12.84□□□□□ -0.35
TNPO1-213ENST00000523768 ADKP55263 362 aaKnown RBP12.84□□□□□ -0.35
TNPO1-213ENST00000523768 TFAP4Q01664 338 aa12.84□□□□□ -0.35
TNPO1-213ENST00000523768 IL17AQ16552 155 aa12.84□□□□□ -0.35
TNPO1-213ENST00000523768 PDXDC2PQ6P474 469 aa12.84□□□□□ -0.35
TNPO1-213ENST00000523768 BLIDQ8IZY5 108 aa12.84□□□□□ -0.35
TNPO1-213ENST00000523768 PANX2Q96RD6 677 aa12.84□□□□□ -0.35
TNPO1-213ENST00000523768 IL17RBQ9NRM6 502 aa12.84□□□□□ -0.35
TNPO1-213ENST00000523768 ADD3Q9UEY8 706 aaKnown RBP12.84□□□□□ -0.35
TNPO1-213ENST00000523768 LDHBP07195 334 aaKnown RBP12.84□□□□□ -0.35
TNPO1-213ENST00000523768 LONP1P36776 959 aaKnown RBP12.84□□□□□ -0.35
TNPO1-213ENST00000523768 GNAQP50148 359 aa12.84□□□□□ -0.35
TNPO1-213ENST00000523768 PPP4CP60510 307 aa12.84□□□□□ -0.35
TNPO1-213ENST00000523768 CCDC24Q8N4L8 307 aa12.84□□□□□ -0.35
TNPO1-213ENST00000523768 C4orf32Q8N8J7 132 aa12.84□□□□□ -0.35
TNPO1-213ENST00000523768 ARHGEF1Q92888 912 aaKnown RBP12.84□□□□□ -0.35
TNPO1-213ENST00000523768 TCP11L1Q9NUJ3 509 aa12.84□□□□□ -0.35
TNPO1-213ENST00000523768 AKR1B15C9JRZ8 316 aaPredicted RBP12.83□□□□□ -0.36
TNPO1-213ENST00000523768 FANCGO15287 622 aa12.83□□□□□ -0.36
TNPO1-213ENST00000523768 GTPBP6O43824 516 aaPredicted RBP12.83□□□□□ -0.36
TNPO1-213ENST00000523768 ZSCAN20P17040 1043 aaPredicted RBP12.83□□□□□ -0.36
TNPO1-213ENST00000523768 MCM7P33993 719 aa12.83□□□□□ -0.36
TNPO1-213ENST00000523768 GRM4Q14833 912 aa12.83□□□□□ -0.36
TNPO1-213ENST00000523768 KLHL10Q6JEL2 608 aa12.83□□□□□ -0.36
TNPO1-213ENST00000523768 FBXO38Q6PIJ6 1188 aa12.83□□□□□ -0.36
TNPO1-213ENST00000523768 PNMA1Q8ND90 353 aa12.83□□□□□ -0.36
TNPO1-213ENST00000523768 PCDHA4Q9UN74 947 aa12.83□□□□□ -0.36
TNPO1-213ENST00000523768 BTAF1O14981 1849 aa12.83□□□□□ -0.36
TNPO1-213ENST00000523768 ADAMTS3O15072 1205 aa12.83□□□□□ -0.36
TNPO1-213ENST00000523768 TEX33O43247 280 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms