RNA–Protein interactions for RNA: ENST00000523514.1

FAM49B-227, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-227ENST00000523514 ROBO3Q96MS0 1386 aa9.24□□□□□ -0.93
FAM49B-227ENST00000523514 A0A0G2JLL6 359 aaPredicted RBP9.24□□□□□ -0.93
FAM49B-227ENST00000523514 GSG1L2A8MUP6 293 aa9.24□□□□□ -0.93
FAM49B-227ENST00000523514 PATL2C9JE40 543 aaKnown RBP9.24□□□□□ -0.93
FAM49B-227ENST00000523514 USP17L12C9JPN9 530 aa9.24□□□□□ -0.93
FAM49B-227ENST00000523514 USP17L21D6R901 530 aa9.24□□□□□ -0.93
FAM49B-227ENST00000523514 GDF11O95390 407 aa9.24□□□□□ -0.93
FAM49B-227ENST00000523514 APPP05067 770 aa9.24□□□□□ -0.93
FAM49B-227ENST00000523514 SLURP2P0DP57 97 aa9.24□□□□□ -0.93
FAM49B-227ENST00000523514 SHMT1P34896 483 aa9.24□□□□□ -0.93
FAM49B-227ENST00000523514 ABCB5Q2M3G0 1257 aa9.24□□□□□ -0.93
FAM49B-227ENST00000523514 CERKLQ49MI3 558 aaPredicted RBP9.24□□□□□ -0.93
FAM49B-227ENST00000523514 MCMDC2Q4G0Z9 681 aa9.24□□□□□ -0.93
FAM49B-227ENST00000523514 PPP4R3BQ5MIZ7 849 aa9.24□□□□□ -0.93
FAM49B-227ENST00000523514 TTC22Q5TAA0 569 aa9.24□□□□□ -0.93
FAM49B-227ENST00000523514 CTR9Q6PD62 1173 aa9.24□□□□□ -0.93
FAM49B-227ENST00000523514 PRRT2Q7Z6L0 340 aaPredicted RBP9.24□□□□□ -0.93
FAM49B-227ENST00000523514 ANKRD23Q86SG2 305 aa9.24□□□□□ -0.93
FAM49B-227ENST00000523514 PARP9Q8IXQ6 854 aa9.24□□□□□ -0.93
FAM49B-227ENST00000523514 TTC13Q8NBP0 860 aa9.24□□□□□ -0.93
FAM49B-227ENST00000523514 ZNF280CQ8ND82 737 aa9.24□□□□□ -0.93
FAM49B-227ENST00000523514 WDR18Q9BV38 432 aa9.24□□□□□ -0.93
FAM49B-227ENST00000523514 NAPBQ9H115 298 aa9.24□□□□□ -0.93
FAM49B-227ENST00000523514 ZNF287Q9HBT7 754 aa9.24□□□□□ -0.93
FAM49B-227ENST00000523514 DIAPH3Q9NSV4 1193 aa9.24□□□□□ -0.93
FAM49B-227ENST00000523514 TRIM75PA6NK02 468 aa9.23□□□□□ -0.93
FAM49B-227ENST00000523514 GH2P01242 217 aa9.23□□□□□ -0.93
FAM49B-227ENST00000523514 SLC3A2P08195 630 aaKnown RBP9.23□□□□□ -0.93
FAM49B-227ENST00000523514 SDSP20132 328 aa9.23□□□□□ -0.93
FAM49B-227ENST00000523514 PABPC4Q13310 644 aaKnown RBP eCLIP9.23□□□□□ -0.93
FAM49B-227ENST00000523514 TAF1CQ15572 869 aaPredicted RBP9.23□□□□□ -0.93
FAM49B-227ENST00000523514 PADI6Q6TGC4 694 aa9.23□□□□□ -0.93
FAM49B-227ENST00000523514 C16orf86Q6ZW13 317 aa9.23□□□□□ -0.93
FAM49B-227ENST00000523514 IFNL3Q8IZI9 196 aa9.23□□□□□ -0.93
FAM49B-227ENST00000523514 PROCA1Q8NCQ7 364 aaPredicted RBP9.23□□□□□ -0.93
FAM49B-227ENST00000523514 CCDC17Q96LX7 622 aa9.23□□□□□ -0.93
FAM49B-227ENST00000523514 SEC62Q99442 399 aaKnown RBP9.23□□□□□ -0.93
FAM49B-227ENST00000523514 PHOX2BQ99453 314 aa9.23□□□□□ -0.93
FAM49B-227ENST00000523514 PARK7Q99497 189 aaKnown RBP9.23□□□□□ -0.93
FAM49B-227ENST00000523514 PTPN18Q99952 460 aa9.23□□□□□ -0.93
FAM49B-227ENST00000523514 ZFYVE28Q9HCC9 887 aa9.23□□□□□ -0.93
FAM49B-227ENST00000523514 EPB41L4AQ9HCS5 686 aaPredicted RBP9.23□□□□□ -0.93
FAM49B-227ENST00000523514 TSKSQ9UJT2 592 aa9.23□□□□□ -0.93
FAM49B-227ENST00000523514 PNMA3Q9UL41 463 aa9.23□□□□□ -0.93
FAM49B-227ENST00000523514 SLC45A1Q9Y2W3 748 aa9.23□□□□□ -0.93
FAM49B-227ENST00000523514 ZMYM6O95789 1325 aa9.23□□□□□ -0.93
FAM49B-227ENST00000523514 CCDC171Q6TFL3 1326 aa9.23□□□□□ -0.93
FAM49B-227ENST00000523514 A0A0D9SFI3 127 aa9.22□□□□□ -0.93
FAM49B-227ENST00000523514 MINDY4BA8MYZ0 360 aa9.22□□□□□ -0.93
FAM49B-227ENST00000523514 C19orf81C9J6K1 198 aa9.22□□□□□ -0.93
FAM49B-227ENST00000523514 BTBD19C9JJ37 291 aa9.22□□□□□ -0.93
FAM49B-227ENST00000523514 GPR25O00155 361 aa9.22□□□□□ -0.93
FAM49B-227ENST00000523514 PDHXO00330 501 aa9.22□□□□□ -0.93
FAM49B-227ENST00000523514 TBC1D8O95759 1140 aa9.22□□□□□ -0.93
FAM49B-227ENST00000523514 CYP2D6P10635 497 aa9.22□□□□□ -0.93
FAM49B-227ENST00000523514 GSPT1P15170 499 aaKnown RBP9.22□□□□□ -0.93
FAM49B-227ENST00000523514 COL9A1P20849 921 aa9.22□□□□□ -0.93
FAM49B-227ENST00000523514 USP14P54578 494 aa9.22□□□□□ -0.93
FAM49B-227ENST00000523514 BACE1P56817 501 aa9.22□□□□□ -0.93
FAM49B-227ENST00000523514 SPP2Q13103 211 aa9.22□□□□□ -0.93
FAM49B-227ENST00000523514 NMIQ13287 307 aaPredicted RBP9.22□□□□□ -0.93
FAM49B-227ENST00000523514 CRHR2Q13324 411 aa9.22□□□□□ -0.93
FAM49B-227ENST00000523514 RRP1BQ14684 758 aaKnown RBP9.22□□□□□ -0.93
FAM49B-227ENST00000523514 SH3D19Q5HYK7 790 aa9.22□□□□□ -0.93
FAM49B-227ENST00000523514 VARS2Q5ST30 1063 aaKnown RBP9.22□□□□□ -0.93
FAM49B-227ENST00000523514 GADL1Q6ZQY3 521 aa9.22□□□□□ -0.93
FAM49B-227ENST00000523514 TMEM179Q6ZVK1 233 aa9.22□□□□□ -0.93
FAM49B-227ENST00000523514 FAM43AQ8N2R8 423 aa9.22□□□□□ -0.93
FAM49B-227ENST00000523514 FAM227BQ96M60 508 aa9.22□□□□□ -0.93
FAM49B-227ENST00000523514 SH2D4AQ9H788 454 aa9.22□□□□□ -0.93
FAM49B-227ENST00000523514 TMOD4Q9NZQ9 345 aa9.22□□□□□ -0.93
FAM49B-227ENST00000523514 RBM27Q9P2N5 1060 aaKnown RBP9.22□□□□□ -0.93
FAM49B-227ENST00000523514 AGTPBP1Q9UPW5 1226 aa9.22□□□□□ -0.93
FAM49B-227ENST00000523514 CASP8AP2Q9UKL3 1982 aa9.22□□□□□ -0.93
FAM49B-227ENST00000523514 RAD50Q92878 1312 aa9.22□□□□□ -0.93
FAM49B-227ENST00000523514 CYP2D7A0A087X1C5 515 aa9.21□□□□□ -0.94
FAM49B-227ENST00000523514 USP17L10C9JJH3 530 aa9.21□□□□□ -0.94
FAM49B-227ENST00000523514 MPHOSPH10O00566 681 aaKnown RBP9.21□□□□□ -0.94
FAM49B-227ENST00000523514 FKTNO75072 461 aa9.21□□□□□ -0.94
FAM49B-227ENST00000523514 CDK8P49336 464 aa9.21□□□□□ -0.94
FAM49B-227ENST00000523514 PDE4BQ07343 736 aa9.21□□□□□ -0.94
FAM49B-227ENST00000523514 MTMR2Q13614 643 aa9.21□□□□□ -0.94
FAM49B-227ENST00000523514 MOGSQ13724 837 aa9.21□□□□□ -0.94
FAM49B-227ENST00000523514 RAB3GAP1Q15042 981 aa9.21□□□□□ -0.94
FAM49B-227ENST00000523514 ALX1Q15699 326 aa9.21□□□□□ -0.94
FAM49B-227ENST00000523514 CCDC129Q6ZRS4 1044 aa9.21□□□□□ -0.94
FAM49B-227ENST00000523514 RUFY2Q8WXA3 655 aa9.21□□□□□ -0.94
FAM49B-227ENST00000523514 DYNLL2Q96FJ2 89 aa9.21□□□□□ -0.94
FAM49B-227ENST00000523514 FEZ1Q99689 392 aa9.21□□□□□ -0.94
FAM49B-227ENST00000523514 MKNK2Q9HBH9 465 aa9.21□□□□□ -0.94
FAM49B-227ENST00000523514 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.21□□□□□ -0.94
FAM49B-227ENST00000523514 LAMA4Q16363 1823 aa9.21□□□□□ -0.94
FAM49B-227ENST00000523514 GREB1LQ9C091 1923 aaPredicted RBP9.21□□□□□ -0.94
FAM49B-227ENST00000523514 TLR2O60603 784 aa9.2□□□□□ -0.94
FAM49B-227ENST00000523514 HMGCS2P54868 508 aa9.2□□□□□ -0.94
FAM49B-227ENST00000523514 JAG1P78504 1218 aa9.2□□□□□ -0.94
FAM49B-227ENST00000523514 PPARAQ07869 468 aa9.2□□□□□ -0.94
FAM49B-227ENST00000523514 ARHGEF6Q15052 776 aa9.2□□□□□ -0.94
FAM49B-227ENST00000523514 GPAT2Q6NUI2 795 aa9.2□□□□□ -0.94
FAM49B-227ENST00000523514 USP17L2Q6R6M4 530 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms