RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 GJB4Q9NTQ9 266 aa10.88□□□□□ -0.67
SDCBP-212ENST00000523483 PCNTO95613 3336 aa10.88□□□□□ -0.67
SDCBP-212ENST00000523483 TRIM75PA6NK02 468 aa10.88□□□□□ -0.67
SDCBP-212ENST00000523483 TROAPQ12815 778 aa10.88□□□□□ -0.67
SDCBP-212ENST00000523483 CUL4AQ13619 759 aa10.88□□□□□ -0.67
SDCBP-212ENST00000523483 OTUD7BQ6GQQ9 843 aa10.88□□□□□ -0.67
SDCBP-212ENST00000523483 CDC37L1Q7L3B6 337 aa10.88□□□□□ -0.67
SDCBP-212ENST00000523483 ZNF341Q9BYN7 854 aa10.88□□□□□ -0.67
SDCBP-212ENST00000523483 ALDH8A1Q9H2A2 487 aaPredicted RBP10.88□□□□□ -0.67
SDCBP-212ENST00000523483 GPBP1L1Q9HC44 474 aaPredicted RBP10.88□□□□□ -0.67
SDCBP-212ENST00000523483 POLR2AP24928 1970 aaKnown RBP10.88□□□□□ -0.67
SDCBP-212ENST00000523483 CCDC196A0A1B0GTZ2 297 aa10.87□□□□□ -0.67
SDCBP-212ENST00000523483 ASNSP08243 561 aa10.87□□□□□ -0.67
SDCBP-212ENST00000523483 SLC1A4P43007 532 aa10.87□□□□□ -0.67
SDCBP-212ENST00000523483 DGKZQ13574 1117 aa10.87□□□□□ -0.67
SDCBP-212ENST00000523483 CCDC178Q5BJE1 867 aa10.87□□□□□ -0.67
SDCBP-212ENST00000523483 TRIM22Q8IYM9 498 aa10.87□□□□□ -0.67
SDCBP-212ENST00000523483 NSUN7Q8NE18 718 aaKnown RBP10.87□□□□□ -0.67
SDCBP-212ENST00000523483 CDCA5Q96FF9 252 aa10.87□□□□□ -0.67
SDCBP-212ENST00000523483 AIFM3Q96NN9 605 aa10.87□□□□□ -0.67
SDCBP-212ENST00000523483 PARP1P09874 1014 aaKnown RBP10.87□□□□□ -0.67
SDCBP-212ENST00000523483 SLC16A2P36021 539 aa10.87□□□□□ -0.67
SDCBP-212ENST00000523483 ARHGEF10LQ9HCE6 1279 aa10.87□□□□□ -0.67
SDCBP-212ENST00000523483 DDX60LQ5H9U9 1706 aaKnown RBP10.87□□□□□ -0.67
SDCBP-212ENST00000523483 KIF5BP33176 963 aa10.87□□□□□ -0.67
SDCBP-212ENST00000523483 ZHX2Q9Y6X8 837 aa10.87□□□□□ -0.67
SDCBP-212ENST00000523483 V9GY48 417 aaPredicted RBP10.87□□□□□ -0.67
SDCBP-212ENST00000523483 CDKL5O76039 1030 aa10.86□□□□□ -0.67
SDCBP-212ENST00000523483 CTDNEP1O95476 244 aa10.86□□□□□ -0.67
SDCBP-212ENST00000523483 MKRN3Q13064 507 aaKnown RBP10.86□□□□□ -0.67
SDCBP-212ENST00000523483 SPP2Q13103 211 aa10.86□□□□□ -0.67
SDCBP-212ENST00000523483 HOOK2Q96ED9 719 aa10.86□□□□□ -0.67
SDCBP-212ENST00000523483 INTS4Q96HW7 963 aaKnown RBP10.86□□□□□ -0.67
SDCBP-212ENST00000523483 A0A1W2PRG0 241 aa10.86□□□□□ -0.67
SDCBP-212ENST00000523483 SSRP1Q08945 709 aaKnown RBP10.86□□□□□ -0.67
SDCBP-212ENST00000523483 SLFN13Q68D06 897 aa10.86□□□□□ -0.67
SDCBP-212ENST00000523483 CHMP5Q9NZZ3 219 aa10.86□□□□□ -0.67
SDCBP-212ENST00000523483 CSADQ9Y600 493 aa10.86□□□□□ -0.67
SDCBP-212ENST00000523483 ECM29Q5VYK3 1845 aa10.86□□□□□ -0.67
SDCBP-212ENST00000523483 LAMB1P07942 1786 aa10.86□□□□□ -0.67
SDCBP-212ENST00000523483 KLRF2D3W0D1 207 aa10.86□□□□□ -0.67
SDCBP-212ENST00000523483 F5H6K3 240 aa10.86□□□□□ -0.67
SDCBP-212ENST00000523483 CALM1P0DP23 149 aa10.86□□□□□ -0.67
SDCBP-212ENST00000523483 CALM2P0DP24 149 aa10.86□□□□□ -0.67
SDCBP-212ENST00000523483 CALM3P0DP25 149 aa10.86□□□□□ -0.67
SDCBP-212ENST00000523483 GUCY1A2P33402 732 aa10.86□□□□□ -0.67
SDCBP-212ENST00000523483 KLRC3Q07444 240 aa10.86□□□□□ -0.67
SDCBP-212ENST00000523483 GNL2Q13823 731 aaKnown RBP10.86□□□□□ -0.67
SDCBP-212ENST00000523483 CHAMP1Q96JM3 812 aa10.86□□□□□ -0.67
SDCBP-212ENST00000523483 DDAH1O94760 285 aa10.85□□□□□ -0.67
SDCBP-212ENST00000523483 NCLP19338 710 aaKnown RBP10.85□□□□□ -0.67
SDCBP-212ENST00000523483 SYT1P21579 422 aa10.85□□□□□ -0.67
SDCBP-212ENST00000523483 GRM1Q13255 1194 aa10.85□□□□□ -0.67
SDCBP-212ENST00000523483 TTBK2Q6IQ55 1244 aa10.85□□□□□ -0.67
SDCBP-212ENST00000523483 NBPF11Q86T75 865 aa10.85□□□□□ -0.67
SDCBP-212ENST00000523483 ZC3H15Q8WU90 426 aaKnown RBP10.85□□□□□ -0.67
SDCBP-212ENST00000523483 CNKSR2Q8WXI2 1034 aa10.85□□□□□ -0.67
SDCBP-212ENST00000523483 TCP11L1Q9NUJ3 509 aa10.85□□□□□ -0.67
SDCBP-212ENST00000523483 SNAP25P60880 206 aa10.85□□□□□ -0.67
SDCBP-212ENST00000523483 ALG1Q9BT22 464 aa10.85□□□□□ -0.67
SDCBP-212ENST00000523483 ELP3Q9H9T3 547 aa10.85□□□□□ -0.67
SDCBP-212ENST00000523483 CWC22Q9HCG8 908 aaKnown RBP10.85□□□□□ -0.67
SDCBP-212ENST00000523483 FAM217BQ9NTX9 383 aaPredicted RBP10.85□□□□□ -0.67
SDCBP-212ENST00000523483 PGAP2Q9UHJ9 254 aa10.85□□□□□ -0.67
SDCBP-212ENST00000523483 KIF3AQ9Y496 699 aa10.85□□□□□ -0.67
SDCBP-212ENST00000523483 PDHBP11177 359 aa10.85□□□□□ -0.67
SDCBP-212ENST00000523483 EVCP57679 992 aa10.85□□□□□ -0.67
SDCBP-212ENST00000523483 HMGN5P82970 282 aaKnown RBP10.85□□□□□ -0.67
SDCBP-212ENST00000523483 MTMR2Q13614 643 aa10.85□□□□□ -0.67
SDCBP-212ENST00000523483 FBXL16Q8N461 479 aa10.85□□□□□ -0.67
SDCBP-212ENST00000523483 OTUD5Q96G74 571 aa10.85□□□□□ -0.67
SDCBP-212ENST00000523483 CLMNQ96JQ2 1002 aa10.85□□□□□ -0.67
SDCBP-212ENST00000523483 C8orf76Q96K31 380 aa10.85□□□□□ -0.67
SDCBP-212ENST00000523483 MTA3Q9BTC8 594 aa10.85□□□□□ -0.67
SDCBP-212ENST00000523483 PITPNM2Q9BZ72 1349 aa10.84□□□□□ -0.67
SDCBP-212ENST00000523483 PHF20L1A8MW92 1017 aa10.84□□□□□ -0.67
SDCBP-212ENST00000523483 STX6O43752 255 aa10.84□□□□□ -0.67
SDCBP-212ENST00000523483 TBC1D12O60347 775 aa10.84□□□□□ -0.67
SDCBP-212ENST00000523483 CTNND1O60716 968 aaKnown RBP10.84□□□□□ -0.67
SDCBP-212ENST00000523483 NDUFB10O96000 172 aa10.84□□□□□ -0.67
SDCBP-212ENST00000523483 TRIM29Q14134 588 aa10.84□□□□□ -0.67
SDCBP-212ENST00000523483 SRBD1Q8N5C6 995 aaKnown RBP10.84□□□□□ -0.67
SDCBP-212ENST00000523483 IL27Q8NEV9 243 aa10.84□□□□□ -0.67
SDCBP-212ENST00000523483 KLRG1Q96E93 195 aa10.84□□□□□ -0.67
SDCBP-212ENST00000523483 PPP2R3BQ9Y5P8 575 aa10.84□□□□□ -0.67
SDCBP-212ENST00000523483 CELF2O95319 508 aaKnown RBP10.84□□□□□ -0.67
SDCBP-212ENST00000523483 IREB2P48200 963 aaKnown RBP10.84□□□□□ -0.67
SDCBP-212ENST00000523483 VGLL4Q14135 290 aa10.84□□□□□ -0.67
SDCBP-212ENST00000523483 GPKOWQ92917 476 aaPredicted RBP eCLIP10.84□□□□□ -0.671e-6■□□□□ 11.3
SDCBP-212ENST00000523483 RBM28Q9NW13 759 aaKnown RBP10.84□□□□□ -0.67
SDCBP-212ENST00000523483 TMEM232C9JQI7 657 aa10.83□□□□□ -0.67
SDCBP-212ENST00000523483 USP2O75604 605 aaPredicted RBP10.83□□□□□ -0.67
SDCBP-212ENST00000523483 FAM83BQ5T0W9 1011 aa10.83□□□□□ -0.67
SDCBP-212ENST00000523483 HEATR3Q7Z4Q2 680 aa10.83□□□□□ -0.67
SDCBP-212ENST00000523483 METTL16Q86W50 562 aaKnown RBP10.83□□□□□ -0.67
SDCBP-212ENST00000523483 SIAH1Q8IUQ4 282 aa10.83□□□□□ -0.67
SDCBP-212ENST00000523483 SCYL3Q8IZE3 742 aa10.83□□□□□ -0.67
SDCBP-212ENST00000523483 TANGO6Q9C0B7 1094 aa10.83□□□□□ -0.67
SDCBP-212ENST00000523483 HMGCS2P54868 508 aa10.83□□□□□ -0.68
SDCBP-212ENST00000523483 FAM173BQ6P4H8 233 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 155.2 ms