RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 CHURC1-FNTBB4DL54 471 aa6.48□□□□□ -1.37
SKP1-210ENST00000522855 DNAJA2O60884 412 aa6.48□□□□□ -1.37
SKP1-210ENST00000522855 SLBPQ14493 270 aaKnown RBP eCLIP6.48□□□□□ -1.37
SKP1-210ENST00000522855 BMS1Q14692 1282 aaKnown RBP6.48□□□□□ -1.37
SKP1-210ENST00000522855 NKG7Q16617 165 aa6.48□□□□□ -1.37
SKP1-210ENST00000522855 DDR2Q16832 855 aa6.48□□□□□ -1.37
SKP1-210ENST00000522855 PRAMEF13Q5VWM6 474 aa6.48□□□□□ -1.37
SKP1-210ENST00000522855 RUFY4Q6ZNE9 571 aa6.48□□□□□ -1.37
SKP1-210ENST00000522855 LRP10Q7Z4F1 713 aa6.48□□□□□ -1.37
SKP1-210ENST00000522855 MRFAP1L1Q96HT8 127 aa6.48□□□□□ -1.37
SKP1-210ENST00000522855 DHRS1Q96LJ7 313 aa6.48□□□□□ -1.37
SKP1-210ENST00000522855 CCDC74BQ96LY2 380 aa6.48□□□□□ -1.37
SKP1-210ENST00000522855 FOXQ1Q9C009 403 aa6.48□□□□□ -1.37
SKP1-210ENST00000522855 MAPK8IP1Q9UQF2 711 aa6.48□□□□□ -1.37
SKP1-210ENST00000522855 SHROOM4Q9ULL8 1493 aa6.47□□□□□ -1.37
SKP1-210ENST00000522855 TXKP42681 527 aa6.47□□□□□ -1.37
SKP1-210ENST00000522855 BBS9Q3SYG4 887 aa6.47□□□□□ -1.37
SKP1-210ENST00000522855 DUSP27Q5VZP5 1158 aa6.47□□□□□ -1.37
SKP1-210ENST00000522855 BCL7CQ8WUZ0 217 aaPredicted RBP6.47□□□□□ -1.37
SKP1-210ENST00000522855 SRPK1Q96SB4 655 aaKnown RBP6.47□□□□□ -1.37
SKP1-210ENST00000522855 DPH2Q9BQC3 489 aaPredicted RBP6.47□□□□□ -1.37
SKP1-210ENST00000522855 RNF114Q9Y508 228 aa6.47□□□□□ -1.37
SKP1-210ENST00000522855 UPK3BL1B0FP48 263 aa6.46□□□□□ -1.38
SKP1-210ENST00000522855 UPK3BL2E5RIL1 263 aa6.46□□□□□ -1.38
SKP1-210ENST00000522855 RGS13O14921 159 aa6.46□□□□□ -1.38
SKP1-210ENST00000522855 ACRP10323 421 aa6.46□□□□□ -1.38
SKP1-210ENST00000522855 GBP1P32455 592 aa6.46□□□□□ -1.38
SKP1-210ENST00000522855 CDK5R2Q13319 367 aa6.46□□□□□ -1.38
SKP1-210ENST00000522855 NCAPHQ15003 741 aa6.46□□□□□ -1.38
SKP1-210ENST00000522855 ZNF746Q6NUN9 644 aaPredicted RBP6.46□□□□□ -1.38
SKP1-210ENST00000522855 UNC5AQ6ZN44 842 aa6.46□□□□□ -1.38
SKP1-210ENST00000522855 UBE3DQ7Z6J8 389 aa6.46□□□□□ -1.38
SKP1-210ENST00000522855 FLCNQ8NFG4 579 aa6.46□□□□□ -1.38
SKP1-210ENST00000522855 DEPDC7Q96QD5 511 aa6.46□□□□□ -1.38
SKP1-210ENST00000522855 SLC9A7Q96T83 725 aa6.46□□□□□ -1.38
SKP1-210ENST00000522855 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.46□□□□□ -1.38
SKP1-210ENST00000522855 TNKS2Q9H2K2 1166 aa6.46□□□□□ -1.38
SKP1-210ENST00000522855 LRRC4CQ9HCJ2 640 aa6.46□□□□□ -1.38
SKP1-210ENST00000522855 CDK11AQ9UQ88 783 aaPredicted RBP6.46□□□□□ -1.38
SKP1-210ENST00000522855 TMA7Q9Y2S6 64 aaKnown RBP6.46□□□□□ -1.38
SKP1-210ENST00000522855 DDAH1O94760 285 aa6.45□□□□□ -1.38
SKP1-210ENST00000522855 ETV3P41162 512 aa6.45□□□□□ -1.38
SKP1-210ENST00000522855 ZNF574Q6ZN55 896 aaPredicted RBP6.45□□□□□ -1.38
SKP1-210ENST00000522855 CELF2-AS1Q8N7Q2 184 aa6.45□□□□□ -1.38
SKP1-210ENST00000522855 KIF2CQ99661 725 aa6.45□□□□□ -1.38
SKP1-210ENST00000522855 LGR6Q9HBX8 967 aa6.45□□□□□ -1.38
SKP1-210ENST00000522855 SNTG2Q9NY99 539 aa6.45□□□□□ -1.38
SKP1-210ENST00000522855 CLEC3AO75596 197 aa6.44□□□□□ -1.38
SKP1-210ENST00000522855 FAM87AP0C7U9 286 aa6.44□□□□□ -1.38
SKP1-210ENST00000522855 POLR2BP30876 1174 aaKnown RBP6.44□□□□□ -1.38
SKP1-210ENST00000522855 RNF4P78317 190 aa6.44□□□□□ -1.38
SKP1-210ENST00000522855 IFRD2Q12894 506 aaPredicted RBP6.44□□□□□ -1.38
SKP1-210ENST00000522855 RASA3Q14644 834 aa6.44□□□□□ -1.38
SKP1-210ENST00000522855 LETMD1Q6P1Q0 360 aa6.44□□□□□ -1.38
SKP1-210ENST00000522855 VHLLQ6RSH7 139 aa6.44□□□□□ -1.38
SKP1-210ENST00000522855 FAM178BQ8IXR5 827 aa6.44□□□□□ -1.38
SKP1-210ENST00000522855 AGBL5Q8NDL9 886 aa6.44□□□□□ -1.38
SKP1-210ENST00000522855 XAGE3Q8WTP9 111 aa6.44□□□□□ -1.38
SKP1-210ENST00000522855 SMARCC1Q92922 1105 aaPredicted RBP6.44□□□□□ -1.38
SKP1-210ENST00000522855 SLC6A18Q96N87 628 aa6.44□□□□□ -1.38
SKP1-210ENST00000522855 MIPEPQ99797 713 aa6.44□□□□□ -1.38
SKP1-210ENST00000522855 CCDC113Q9H0I3 377 aa6.44□□□□□ -1.38
SKP1-210ENST00000522855 MSRB2Q9Y3D2 182 aa6.44□□□□□ -1.38
SKP1-210ENST00000522855 LOC105371045A0A1W2PR82 267 aa6.43□□□□□ -1.38
SKP1-210ENST00000522855 FAM86C2PA6NEL3 165 aa6.43□□□□□ -1.38
SKP1-210ENST00000522855 CCDC85CA6NKD9 419 aa6.43□□□□□ -1.38
SKP1-210ENST00000522855 NAT2P11245 290 aa6.43□□□□□ -1.38
SKP1-210ENST00000522855 PMS1P54277 932 aaKnown RBP6.43□□□□□ -1.38
SKP1-210ENST00000522855 SLC7A5Q01650 507 aa6.43□□□□□ -1.38
SKP1-210ENST00000522855 RASGRF1Q13972 1273 aa6.43□□□□□ -1.38
SKP1-210ENST00000522855 ZYXQ15942 572 aaKnown RBP6.43□□□□□ -1.38
SKP1-210ENST00000522855 C6orf15Q6UXA7 325 aaPredicted RBP6.43□□□□□ -1.38
SKP1-210ENST00000522855 SPRED2Q7Z698 418 aa6.43□□□□□ -1.38
SKP1-210ENST00000522855 TP53INP2Q8IXH6 220 aa6.43□□□□□ -1.38
SKP1-210ENST00000522855 PLD6Q8N2A8 252 aaKnown RBP6.43□□□□□ -1.38
SKP1-210ENST00000522855 FAM181AQ8N9Y4 354 aa6.43□□□□□ -1.38
SKP1-210ENST00000522855 PIF1Q9H611 641 aa6.43□□□□□ -1.38
SKP1-210ENST00000522855 PRDM10Q9NQV6 1147 aa6.43□□□□□ -1.38
SKP1-210ENST00000522855 ST7Q9NRC1 585 aa6.43□□□□□ -1.38
SKP1-210ENST00000522855 SUCOQ9UBS9 1254 aaKnown RBP6.43□□□□□ -1.38
SKP1-210ENST00000522855 ZNF214Q9UL59 606 aaPredicted RBP6.43□□□□□ -1.38
SKP1-210ENST00000522855 PDPK1O15530 556 aa6.42□□□□□ -1.38
SKP1-210ENST00000522855 LEFTY1O75610 366 aa6.42□□□□□ -1.38
SKP1-210ENST00000522855 UBOX5O94941 541 aa6.42□□□□□ -1.38
SKP1-210ENST00000522855 PAPLNO95428 1278 aa6.42□□□□□ -1.38
SKP1-210ENST00000522855 GJB6O95452 261 aa6.42□□□□□ -1.38
SKP1-210ENST00000522855 CYP7A1P22680 504 aa6.42□□□□□ -1.38
SKP1-210ENST00000522855 CANXP27824 592 aaKnown RBP6.42□□□□□ -1.38
SKP1-210ENST00000522855 GNPTABQ3T906 1256 aa6.42□□□□□ -1.38
SKP1-210ENST00000522855 CYP27C1Q4G0S4 372 aa6.42□□□□□ -1.38
SKP1-210ENST00000522855 EEPD1Q7L9B9 569 aa6.42□□□□□ -1.38
SKP1-210ENST00000522855 BAHD1Q8TBE0 780 aaPredicted RBP6.42□□□□□ -1.38
SKP1-210ENST00000522855 MISP3Q96FF7 219 aa6.42□□□□□ -1.38
SKP1-210ENST00000522855 COX4I2Q96KJ9 171 aa6.42□□□□□ -1.38
SKP1-210ENST00000522855 DUSP23Q9BVJ7 150 aa6.42□□□□□ -1.38
SKP1-210ENST00000522855 MKNK2Q9HBH9 465 aa6.42□□□□□ -1.38
SKP1-210ENST00000522855 KRTAP4-8A0A0G2JLE6 195 aa6.41□□□□□ -1.38
SKP1-210ENST00000522855 OXCT1P55809 520 aa6.41□□□□□ -1.38
SKP1-210ENST00000522855 GIMAP6Q6P9H5 292 aa6.41□□□□□ -1.38
SKP1-210ENST00000522855 FAM214BQ7L5A3 538 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms