RNA–Protein interactions for RNA: ENST00000522563.5

NSMCE2-210, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NSMCE2, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-210ENST00000522563 CFAP74Q9C0B2 1584 aa9.54□□□□□ -0.88
NSMCE2-210ENST00000522563 PLEKHD1A6NEE1 506 aa9.53□□□□□ -0.88
NSMCE2-210ENST00000522563 APOBRQ0VD83 1088 aa9.53□□□□□ -0.88
NSMCE2-210ENST00000522563 TMEM201Q5SNT2 666 aa9.53□□□□□ -0.88
NSMCE2-210ENST00000522563 SLC6A19Q695T7 634 aa9.53□□□□□ -0.88
NSMCE2-210ENST00000522563 ZFYVE16Q7Z3T8 1539 aa9.52□□□□□ -0.88
NSMCE2-210ENST00000522563 CHURC1-FNTBB4DL54 471 aa9.52□□□□□ -0.89
NSMCE2-210ENST00000522563 CLCQ05315 142 aa9.52□□□□□ -0.89
NSMCE2-210ENST00000522563 DTX1Q86Y01 620 aa9.52□□□□□ -0.89
NSMCE2-210ENST00000522563 PLD6Q8N2A8 252 aaKnown RBP9.52□□□□□ -0.89
NSMCE2-210ENST00000522563 MFSD2AQ8NA29 543 aa9.52□□□□□ -0.89
NSMCE2-210ENST00000522563 FAM13CQ8NE31 585 aa9.52□□□□□ -0.89
NSMCE2-210ENST00000522563 NKD1Q969G9 470 aa9.52□□□□□ -0.89
NSMCE2-210ENST00000522563 ZFP64Q9NPA5 681 aa9.52□□□□□ -0.89
NSMCE2-210ENST00000522563 KLHL3Q9UH77 587 aa9.52□□□□□ -0.89
NSMCE2-210ENST00000522563 EFCAB5A4FU69 1503 aa9.51□□□□□ -0.89
NSMCE2-210ENST00000522563 TTC37Q6PGP7 1564 aa9.51□□□□□ -0.89
NSMCE2-210ENST00000522563 OXCT1P55809 520 aa9.51□□□□□ -0.89
NSMCE2-210ENST00000522563 LETMD1Q6P1Q0 360 aa9.51□□□□□ -0.89
NSMCE2-210ENST00000522563 CDH24Q86UP0 819 aa9.51□□□□□ -0.89
NSMCE2-210ENST00000522563 SLITRK4Q8IW52 837 aa9.51□□□□□ -0.89
NSMCE2-210ENST00000522563 SUPT6HQ7KZ85 1726 aaKnown RBP9.51□□□□□ -0.89
NSMCE2-210ENST00000522563 YEATS2Q9ULM3 1422 aa9.5□□□□□ -0.89
NSMCE2-210ENST00000522563 HECW1Q76N89 1606 aa9.5□□□□□ -0.89
NSMCE2-210ENST00000522563 MCM4P33991 863 aa9.5□□□□□ -0.89
NSMCE2-210ENST00000522563 RAD51AP2Q09MP3 1159 aa9.5□□□□□ -0.89
NSMCE2-210ENST00000522563 GK5Q6ZS86 529 aa9.5□□□□□ -0.89
NSMCE2-210ENST00000522563 ZNF654Q8IZM8 581 aa9.5□□□□□ -0.89
NSMCE2-210ENST00000522563 PLAGL2Q9UPG8 496 aa9.5□□□□□ -0.89
NSMCE2-210ENST00000522563 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.5□□□□□ -0.89
NSMCE2-210ENST00000522563 LOC100996750A0A140TA64 210 aa9.49□□□□□ -0.89
NSMCE2-210ENST00000522563 PRR33A8MZF0 331 aa9.49□□□□□ -0.89
NSMCE2-210ENST00000522563 ITIH2P19823 946 aa9.49□□□□□ -0.89
NSMCE2-210ENST00000522563 PAK2Q13177 524 aa9.49□□□□□ -0.89
NSMCE2-210ENST00000522563 KRTAP4-6Q9BYQ5 205 aa9.49□□□□□ -0.89
NSMCE2-210ENST00000522563 ANTXR1Q9H6X2 564 aa9.49□□□□□ -0.89
NSMCE2-210ENST00000522563 TPX2Q9ULW0 747 aaKnown RBP9.49□□□□□ -0.89
NSMCE2-210ENST00000522563 ATE1O95260 518 aa9.48□□□□□ -0.89
NSMCE2-210ENST00000522563 NFXL1Q6ZNB6 911 aa9.48□□□□□ -0.89
NSMCE2-210ENST00000522563 DNAJB8Q8NHS0 232 aa9.48□□□□□ -0.89
NSMCE2-210ENST00000522563 PPP1R13LQ8WUF5 828 aa9.48□□□□□ -0.89
NSMCE2-210ENST00000522563 EHMT1Q9H9B1 1298 aa9.48□□□□□ -0.89
NSMCE2-210ENST00000522563 PRDM5Q9NQX1 630 aaPredicted RBP9.48□□□□□ -0.89
NSMCE2-210ENST00000522563 UHRF1BP1Q6BDS2 1440 aa9.48□□□□□ -0.89
NSMCE2-210ENST00000522563 SLC22A31A6NKX4 558 aa9.47□□□□□ -0.89
NSMCE2-210ENST00000522563 ACBD3Q9H3P7 528 aa9.47□□□□□ -0.89
NSMCE2-210ENST00000522563 GTF2IRD1Q9UHL9 959 aa9.47□□□□□ -0.89
NSMCE2-210ENST00000522563 C3P01024 1663 aa9.47□□□□□ -0.89
NSMCE2-210ENST00000522563 FHOD3Q2V2M9 1422 aa9.47□□□□□ -0.89
NSMCE2-210ENST00000522563 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.46□□□□□ -0.89
NSMCE2-210ENST00000522563 IGF2BP3O00425 579 aaKnown RBP eCLIP9.46□□□□□ -0.9
NSMCE2-210ENST00000522563 CEACAM5P06731 702 aa9.46□□□□□ -0.9
NSMCE2-210ENST00000522563 ARHGAP27Q6ZUM4 889 aa9.46□□□□□ -0.9
NSMCE2-210ENST00000522563 BAHD1Q8TBE0 780 aaPredicted RBP9.46□□□□□ -0.9
NSMCE2-210ENST00000522563 NETO1Q8TDF5 533 aa9.46□□□□□ -0.9
NSMCE2-210ENST00000522563 MYO5CQ9NQX4 1742 aa9.45□□□□□ -0.9
NSMCE2-210ENST00000522563 TCF3P15923 654 aa9.45□□□□□ -0.9
NSMCE2-210ENST00000522563 TNNI2P48788 182 aa9.45□□□□□ -0.9
NSMCE2-210ENST00000522563 YARSP54577 528 aaKnown RBP9.45□□□□□ -0.9
NSMCE2-210ENST00000522563 BNIP3Q12983 259 aa9.45□□□□□ -0.9
NSMCE2-210ENST00000522563 NKPD1Q17RQ9 610 aa9.45□□□□□ -0.9
NSMCE2-210ENST00000522563 ARSHQ5FYA8 562 aa9.45□□□□□ -0.9
NSMCE2-210ENST00000522563 OVOS1Q6IE37 1185 aa9.45□□□□□ -0.9
NSMCE2-210ENST00000522563 SLFN12Q8IYM2 578 aa9.45□□□□□ -0.9
NSMCE2-210ENST00000522563 REXO1Q8N1G1 1221 aaKnown RBP9.45□□□□□ -0.9
NSMCE2-210ENST00000522563 CYB5D2Q8WUJ1 264 aa9.45□□□□□ -0.9
NSMCE2-210ENST00000522563 BSDC1Q9NW68 430 aaPredicted RBP9.45□□□□□ -0.9
NSMCE2-210ENST00000522563 CCDC39Q9UFE4 941 aa9.45□□□□□ -0.9
NSMCE2-210ENST00000522563 MAPK8IP1Q9UQF2 711 aa9.45□□□□□ -0.9
NSMCE2-210ENST00000522563 SCAPERQ9BY12 1400 aa9.45□□□□□ -0.9
NSMCE2-210ENST00000522563 ATP10AO60312 1499 aa9.45□□□□□ -0.9
NSMCE2-210ENST00000522563 ZMYM4Q5VZL5 1548 aa9.45□□□□□ -0.9
NSMCE2-210ENST00000522563 SAMD9Q5K651 1589 aa9.45□□□□□ -0.9
NSMCE2-210ENST00000522563 CBX7O95931 251 aa9.44□□□□□ -0.9
NSMCE2-210ENST00000522563 PRNPP04156 253 aa9.44□□□□□ -0.9
NSMCE2-210ENST00000522563 ZNF165P49910 485 aa9.44□□□□□ -0.9
NSMCE2-210ENST00000522563 SFRP5Q5T4F7 317 aa9.44□□□□□ -0.9
NSMCE2-210ENST00000522563 WFDC3Q8IUB2 231 aa9.44□□□□□ -0.9
NSMCE2-210ENST00000522563 SPACA3Q8IXA5 215 aa9.44□□□□□ -0.9
NSMCE2-210ENST00000522563 KIF2CQ99661 725 aa9.44□□□□□ -0.9
NSMCE2-210ENST00000522563 TGIF2Q9GZN2 237 aa9.44□□□□□ -0.9
NSMCE2-210ENST00000522563 MKNK2Q9HBH9 465 aa9.44□□□□□ -0.9
NSMCE2-210ENST00000522563 GINM1Q9NU53 330 aa9.44□□□□□ -0.9
NSMCE2-210ENST00000522563 CEP131Q9UPN4 1083 aa9.44□□□□□ -0.9
NSMCE2-210ENST00000522563 NUP153P49790 1475 aaKnown RBP9.44□□□□□ -0.9
NSMCE2-210ENST00000522563 MAGI2Q86UL8 1455 aa9.44□□□□□ -0.9
NSMCE2-210ENST00000522563 ARHGEF12Q9NZN5 1544 aa9.43□□□□□ -0.9
NSMCE2-210ENST00000522563 POLR2BP30876 1174 aaKnown RBP9.43□□□□□ -0.9
NSMCE2-210ENST00000522563 CD96P40200 585 aa9.43□□□□□ -0.9
NSMCE2-210ENST00000522563 ZNF574Q6ZN55 896 aaPredicted RBP9.43□□□□□ -0.9
NSMCE2-210ENST00000522563 BCL7CQ8WUZ0 217 aaPredicted RBP9.43□□□□□ -0.9
NSMCE2-210ENST00000522563 TNKS2Q9H2K2 1166 aa9.43□□□□□ -0.9
NSMCE2-210ENST00000522563 GMIPQ9P107 970 aa9.43□□□□□ -0.9
NSMCE2-210ENST00000522563 PPT2Q9UMR5 302 aa9.43□□□□□ -0.9
NSMCE2-210ENST00000522563 PRXQ9BXM0 1461 aa9.42□□□□□ -0.9
NSMCE2-210ENST00000522563 C9orf84Q5VXU9 1444 aa9.42□□□□□ -0.9
NSMCE2-210ENST00000522563 ERCC5P28715 1186 aaPredicted RBP9.42□□□□□ -0.9
NSMCE2-210ENST00000522563 IFI16Q16666 785 aaKnown RBP9.42□□□□□ -0.9
NSMCE2-210ENST00000522563 XP32Q5T750 250 aa9.42□□□□□ -0.9
NSMCE2-210ENST00000522563 SPRED2Q7Z698 418 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms