RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 AKR1B1P15121 316 aa11.17□□□□□ -0.62
SPARC-205ENST00000522348 RPS12P25398 132 aaKnown RBP11.17□□□□□ -0.62
SPARC-205ENST00000522348 CALML3P27482 149 aa11.17□□□□□ -0.62
SPARC-205ENST00000522348 ME1P48163 572 aa11.17□□□□□ -0.62
SPARC-205ENST00000522348 CACNB3P54284 484 aa11.17□□□□□ -0.62
SPARC-205ENST00000522348 PFKFB3Q16875 520 aaPredicted RBP11.17□□□□□ -0.62
SPARC-205ENST00000522348 CERKLQ49MI3 558 aaPredicted RBP11.17□□□□□ -0.62
SPARC-205ENST00000522348 TATDN1Q6P1N9 297 aa11.17□□□□□ -0.62
SPARC-205ENST00000522348 FAM151AQ8WW52 585 aa11.17□□□□□ -0.62
SPARC-205ENST00000522348 MKL1Q969V6 931 aa11.17□□□□□ -0.62
SPARC-205ENST00000522348 PHF20Q9BVI0 1012 aa11.17□□□□□ -0.62
SPARC-205ENST00000522348 KANSL2Q9H9L4 492 aa11.17□□□□□ -0.62
SPARC-205ENST00000522348 DDX19AQ9NUU7 478 aaKnown RBP11.17□□□□□ -0.62
SPARC-205ENST00000522348 ZNF70Q9UC06 446 aaPredicted RBP11.17□□□□□ -0.62
SPARC-205ENST00000522348 CLIP2Q9UDT6 1046 aa11.17□□□□□ -0.62
SPARC-205ENST00000522348 KCNJ14Q9UNX9 436 aa11.17□□□□□ -0.62
SPARC-205ENST00000522348 PCDHAC2Q9Y5I4 1007 aa11.17□□□□□ -0.62
SPARC-205ENST00000522348 ATRNL1Q5VV63 1379 aa11.16□□□□□ -0.62
SPARC-205ENST00000522348 CNTNAP5Q8WYK1 1306 aa11.16□□□□□ -0.62
SPARC-205ENST00000522348 A0A1W2PQ27 194 aa11.16□□□□□ -0.62
SPARC-205ENST00000522348 A0A1W2PQ64 194 aa11.16□□□□□ -0.62
SPARC-205ENST00000522348 A0A1W2PQD8 194 aa11.16□□□□□ -0.62
SPARC-205ENST00000522348 SYCE3A1L190 88 aa11.16□□□□□ -0.62
SPARC-205ENST00000522348 UBE2Q2LH0YL09 131 aa11.16□□□□□ -0.62
SPARC-205ENST00000522348 MPHOSPH10O00566 681 aaKnown RBP11.16□□□□□ -0.62
SPARC-205ENST00000522348 PPP6R2O75170 966 aa11.16□□□□□ -0.62
SPARC-205ENST00000522348 KRT2P35908 639 aa11.16□□□□□ -0.62
SPARC-205ENST00000522348 NLRP5P59047 1200 aa11.16□□□□□ -0.62
SPARC-205ENST00000522348 TPRNQ4KMQ1 711 aa11.16□□□□□ -0.62
SPARC-205ENST00000522348 GALNT17Q6IS24 598 aa11.16□□□□□ -0.62
SPARC-205ENST00000522348 SH3BP5LQ7L8J4 393 aa11.16□□□□□ -0.62
SPARC-205ENST00000522348 GAS2L3Q86XJ1 694 aa11.16□□□□□ -0.62
SPARC-205ENST00000522348 CCAR1Q8IX12 1150 aaKnown RBP11.16□□□□□ -0.62
SPARC-205ENST00000522348 STAG2Q8N3U4 1231 aa11.16□□□□□ -0.62
SPARC-205ENST00000522348 BICD2Q8TD16 824 aa11.16□□□□□ -0.62
SPARC-205ENST00000522348 SPZ1Q9BXG8 430 aa11.16□□□□□ -0.62
SPARC-205ENST00000522348 GRPEL1Q9HAV7 217 aa11.16□□□□□ -0.62
SPARC-205ENST00000522348 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.16□□□□□ -0.62
SPARC-205ENST00000522348 NYAP2Q9P242 653 aa11.16□□□□□ -0.62
SPARC-205ENST00000522348 HERC5Q9UII4 1024 aaKnown RBP11.16□□□□□ -0.62
SPARC-205ENST00000522348 PCDHA7Q9UN72 937 aa11.16□□□□□ -0.62
SPARC-205ENST00000522348 ZBTB12Q9Y330 459 aaPredicted RBP11.16□□□□□ -0.62
SPARC-205ENST00000522348 CLIC4Q9Y696 253 aa11.16□□□□□ -0.62
SPARC-205ENST00000522348 NAV1Q8NEY1 1877 aa11.16□□□□□ -0.62
SPARC-205ENST00000522348 COL2A1P02458 1487 aaPredicted RBP11.15□□□□□ -0.62
SPARC-205ENST00000522348 NFKBIEO00221 500 aa11.15□□□□□ -0.62
SPARC-205ENST00000522348 GRIN3BO60391 1043 aa11.15□□□□□ -0.62
SPARC-205ENST00000522348 EIF6P56537 245 aaKnown RBP11.15□□□□□ -0.62
SPARC-205ENST00000522348 SPDYE2Q495Y8 402 aa11.15□□□□□ -0.62
SPARC-205ENST00000522348 ASPRV1Q53RT3 343 aa11.15□□□□□ -0.62
SPARC-205ENST00000522348 CCDC73Q6ZRK6 1079 aa11.15□□□□□ -0.62
SPARC-205ENST00000522348 FAM83AQ86UY5 434 aa11.15□□□□□ -0.62
SPARC-205ENST00000522348 CCDC12Q8WUD4 166 aaPredicted RBP11.15□□□□□ -0.62
SPARC-205ENST00000522348 DPF2Q92785 391 aa11.15□□□□□ -0.62
SPARC-205ENST00000522348 RRP36Q96EU6 259 aaKnown RBP11.15□□□□□ -0.62
SPARC-205ENST00000522348 ZBED3Q96IU2 234 aaPredicted RBP11.15□□□□□ -0.62
SPARC-205ENST00000522348 CABP5Q9NP86 173 aa11.15□□□□□ -0.62
SPARC-205ENST00000522348 VPS54Q9P1Q0 977 aa11.15□□□□□ -0.62
SPARC-205ENST00000522348 NOL7Q9UMY1 257 aaKnown RBP11.15□□□□□ -0.62
SPARC-205ENST00000522348 CEP131Q9UPN4 1083 aa11.15□□□□□ -0.62
SPARC-205ENST00000522348 hCG_1642624A0A1W2PR95 340 aa11.14□□□□□ -0.63
SPARC-205ENST00000522348 USP17L5A8MUK1 530 aa11.14□□□□□ -0.63
SPARC-205ENST00000522348 TCP10L2B9ZVM9 353 aa11.14□□□□□ -0.63
SPARC-205ENST00000522348 hCG_1984214I3L0E3 225 aa11.14□□□□□ -0.63
SPARC-205ENST00000522348 CTAGE5O15320 804 aa11.14□□□□□ -0.63
SPARC-205ENST00000522348 TBC1D12O60347 775 aa11.14□□□□□ -0.63
SPARC-205ENST00000522348 SNHG28P0DPA3 235 aa11.14□□□□□ -0.63
SPARC-205ENST00000522348 XRCC6P12956 609 aaKnown RBP eCLIP11.14□□□□□ -0.63
SPARC-205ENST00000522348 LIG1P18858 919 aa11.14□□□□□ -0.63
SPARC-205ENST00000522348 TNNI2P48788 182 aa11.14□□□□□ -0.63
SPARC-205ENST00000522348 ABCB5Q2M3G0 1257 aa11.14□□□□□ -0.63
SPARC-205ENST00000522348 GPATCH4Q5T3I0 446 aaKnown RBP11.14□□□□□ -0.63
SPARC-205ENST00000522348 RBM26Q5T8P6 1007 aaKnown RBP11.14□□□□□ -0.63
SPARC-205ENST00000522348 TMEM179Q6ZVK1 233 aa11.14□□□□□ -0.63
SPARC-205ENST00000522348 ZNF713Q8N859 430 aaPredicted RBP11.14□□□□□ -0.63
SPARC-205ENST00000522348 CCDC148Q8NFR7 591 aa11.14□□□□□ -0.63
SPARC-205ENST00000522348 FTOQ9C0B1 505 aaKnown RBP eCLIP11.14□□□□□ -0.63
SPARC-205ENST00000522348 NUP62CLQ9H1M0 184 aa11.14□□□□□ -0.63
SPARC-205ENST00000522348 TSPY26PQ9H489 355 aa11.14□□□□□ -0.63
SPARC-205ENST00000522348 RIOX1Q9H6W3 641 aa11.14□□□□□ -0.63
SPARC-205ENST00000522348 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.14□□□□□ -0.63
SPARC-205ENST00000522348 DACT1Q9NYF0 836 aa11.14□□□□□ -0.63
SPARC-205ENST00000522348 MORC2Q9Y6X9 1032 aaPredicted RBP11.14□□□□□ -0.63
SPARC-205ENST00000522348 MYH1P12882 1939 aa11.13□□□□□ -0.63
SPARC-205ENST00000522348 DDX60LQ5H9U9 1706 aaKnown RBP11.13□□□□□ -0.63
SPARC-205ENST00000522348 FZD9O00144 591 aa11.13□□□□□ -0.63
SPARC-205ENST00000522348 CUTAO60888 179 aa11.13□□□□□ -0.63
SPARC-205ENST00000522348 BMP15O95972 392 aa11.13□□□□□ -0.63
SPARC-205ENST00000522348 PDHBP11177 359 aa11.13□□□□□ -0.63
SPARC-205ENST00000522348 CMA1P23946 247 aa11.13□□□□□ -0.63
SPARC-205ENST00000522348 TRAPPC10P48553 1259 aa11.13□□□□□ -0.63
SPARC-205ENST00000522348 ZNF280AP59817 542 aaPredicted RBP11.13□□□□□ -0.63
SPARC-205ENST00000522348 PTPAQ15257 358 aa11.13□□□□□ -0.63
SPARC-205ENST00000522348 USP17L2Q6R6M4 530 aa11.13□□□□□ -0.63
SPARC-205ENST00000522348 MRPS27Q92552 414 aaKnown RBP11.13□□□□□ -0.63
SPARC-205ENST00000522348 CSRNP1Q96S65 589 aa11.13□□□□□ -0.63
SPARC-205ENST00000522348 TNMDQ9H2S6 317 aa11.13□□□□□ -0.63
SPARC-205ENST00000522348 CLSTN2Q9H4D0 955 aa11.13□□□□□ -0.63
SPARC-205ENST00000522348 MYOZ2Q9NPC6 264 aa11.13□□□□□ -0.63
SPARC-205ENST00000522348 BARHL2Q9NY43 387 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms