RNA–Protein interactions for RNA: ENST00000522336.5

CPEB4-209, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 5 BASIC

Gene CPEB4, Length 1,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-209ENST00000522336 FAM196BA6NMK8 535 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 MPHOSPH10O00566 681 aaKnown RBP9.8□□□□□ -0.84
CPEB4-209ENST00000522336 TRAK2O60296 914 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 PRPF40AO75400 957 aaKnown RBP9.8□□□□□ -0.84
CPEB4-209ENST00000522336 EGFRP00533 1210 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 PARP1P09874 1014 aaKnown RBP9.8□□□□□ -0.84
CPEB4-209ENST00000522336 XBP1P17861 261 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 GUCY1A2P33402 732 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 KIF23Q02241 960 aaPredicted RBP9.8□□□□□ -0.84
CPEB4-209ENST00000522336 DNM1Q05193 864 aaKnown RBP9.8□□□□□ -0.84
CPEB4-209ENST00000522336 PKN1Q16512 942 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 ABCB5Q2M3G0 1257 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 ASPRV1Q53RT3 343 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 SAMD7Q7Z3H4 446 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 CCDC82Q8N4S0 544 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 AIFM3Q96NN9 605 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 SPZ1Q9BXG8 430 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 TMEM39BQ9GZU3 492 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 SCAND2PQ9GZW5 306 aaPredicted RBP9.8□□□□□ -0.84
CPEB4-209ENST00000522336 CABP5Q9NP86 173 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 RNF181Q9P0P0 153 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 CLIP2Q9UDT6 1046 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 ELP1O95163 1332 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 MMP1P03956 469 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 SLURP2P0DP57 97 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 PDHBP11177 359 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 U2AF2P26368 475 aaKnown RBP eCLIP9.8□□□□□ -0.843e-6■■■■□ 26.2
CPEB4-209ENST00000522336 GUCY1B3Q02153 619 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 RASA3Q14644 834 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 KLHL40Q2TBA0 621 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 TBC1D10BQ4KMP7 808 aaPredicted RBP9.8□□□□□ -0.84
CPEB4-209ENST00000522336 RBM26Q5T8P6 1007 aaKnown RBP9.8□□□□□ -0.84
CPEB4-209ENST00000522336 OTUD7BQ6GQQ9 843 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 USP48Q86UV5 1035 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 CMTR1Q8N1G2 835 aaKnown RBP9.8□□□□□ -0.84
CPEB4-209ENST00000522336 STAG2Q8N3U4 1231 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 CHAMP1Q96JM3 812 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 TEPSINQ96N21 525 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 CFAP45Q9UL16 551 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 CNPY2Q9Y2B0 182 aa9.8□□□□□ -0.84
CPEB4-209ENST00000522336 V9GY48 417 aaPredicted RBP9.8□□□□□ -0.84
CPEB4-209ENST00000522336 ZC3H4Q9UPT8 1303 aaKnown RBP9.79□□□□□ -0.84
CPEB4-209ENST00000522336 KLRF2D3W0D1 207 aa9.79□□□□□ -0.84
CPEB4-209ENST00000522336 SCG2P13521 617 aa9.79□□□□□ -0.84
CPEB4-209ENST00000522336 FOSBP53539 338 aa9.79□□□□□ -0.84
CPEB4-209ENST00000522336 ICA1Q05084 483 aa9.79□□□□□ -0.84
CPEB4-209ENST00000522336 SEPT2Q15019 361 aa9.79□□□□□ -0.84
CPEB4-209ENST00000522336 SAFBQ15424 915 aaKnown RBP eCLIP9.79□□□□□ -0.84
CPEB4-209ENST00000522336 PFKFB3Q16875 520 aaPredicted RBP9.79□□□□□ -0.84
CPEB4-209ENST00000522336 FOXD4L6Q3SYB3 417 aaPredicted RBP9.79□□□□□ -0.84
CPEB4-209ENST00000522336 GPATCH4Q5T3I0 446 aaKnown RBP9.79□□□□□ -0.84
CPEB4-209ENST00000522336 FOXD4L3Q6VB84 417 aaPredicted RBP9.79□□□□□ -0.84
CPEB4-209ENST00000522336 APOBEC3FQ8IUX4 373 aaKnown RBP9.79□□□□□ -0.84
CPEB4-209ENST00000522336 ZNF396Q96N95 335 aaPredicted RBP9.79□□□□□ -0.84
CPEB4-209ENST00000522336 FOXP1Q9H334 677 aaPredicted RBP9.79□□□□□ -0.84
CPEB4-209ENST00000522336 SH3GLB2Q9NR46 395 aa9.79□□□□□ -0.84
CPEB4-209ENST00000522336 GINM1Q9NU53 330 aa9.79□□□□□ -0.84
CPEB4-209ENST00000522336 HACL1Q9UJ83 578 aa9.79□□□□□ -0.84
CPEB4-209ENST00000522336 PITPNM2Q9BZ72 1349 aa9.78□□□□□ -0.84
CPEB4-209ENST00000522336 USP17L5A8MUK1 530 aa9.78□□□□□ -0.84
CPEB4-209ENST00000522336 KIF28PB7ZC32 967 aa9.78□□□□□ -0.84
CPEB4-209ENST00000522336 UBE2Q2LH0YL09 131 aa9.78□□□□□ -0.84
CPEB4-209ENST00000522336 GRIN3BO60391 1043 aa9.78□□□□□ -0.84
CPEB4-209ENST00000522336 GDF11O95390 407 aa9.78□□□□□ -0.84
CPEB4-209ENST00000522336 MBD3O95983 291 aa9.78□□□□□ -0.84
CPEB4-209ENST00000522336 EEF2P13639 858 aaKnown RBP9.78□□□□□ -0.84
CPEB4-209ENST00000522336 NCLP19338 710 aaKnown RBP9.78□□□□□ -0.84
CPEB4-209ENST00000522336 ZNF543Q08ER8 600 aa9.78□□□□□ -0.84
CPEB4-209ENST00000522336 RRP1BQ14684 758 aaKnown RBP9.78□□□□□ -0.84
CPEB4-209ENST00000522336 SLC35G1Q2M3R5 365 aa9.78□□□□□ -0.84
CPEB4-209ENST00000522336 MYSM1Q5VVJ2 828 aa9.78□□□□□ -0.84
CPEB4-209ENST00000522336 C9orf131Q5VYM1 1079 aa9.78□□□□□ -0.84
CPEB4-209ENST00000522336 FAM173BQ6P4H8 233 aa9.78□□□□□ -0.84
CPEB4-209ENST00000522336 SIAH1Q8IUQ4 282 aa9.78□□□□□ -0.84
CPEB4-209ENST00000522336 GMCL1P1Q8NEA9 526 aa9.78□□□□□ -0.84
CPEB4-209ENST00000522336 DCAF4Q8WV16 495 aa9.78□□□□□ -0.84
CPEB4-209ENST00000522336 HOOK2Q96ED9 719 aa9.78□□□□□ -0.84
CPEB4-209ENST00000522336 PHF20Q9BVI0 1012 aa9.78□□□□□ -0.84
CPEB4-209ENST00000522336 RIOX1Q9H6W3 641 aa9.78□□□□□ -0.84
CPEB4-209ENST00000522336 GJB4Q9NTQ9 266 aa9.78□□□□□ -0.84
CPEB4-209ENST00000522336 PPP2R3BQ9Y5P8 575 aa9.78□□□□□ -0.84
CPEB4-209ENST00000522336 DDX49Q9Y6V7 483 aaKnown RBP9.78□□□□□ -0.84
CPEB4-209ENST00000522336 hCG_1984214I3L0E3 225 aa9.77□□□□□ -0.85
CPEB4-209ENST00000522336 FIBPO43427 364 aa9.77□□□□□ -0.85
CPEB4-209ENST00000522336 CYTH3O43739 400 aa9.77□□□□□ -0.85
CPEB4-209ENST00000522336 DDNO94850 711 aaPredicted RBP9.77□□□□□ -0.85
CPEB4-209ENST00000522336 GH2P01242 217 aa9.77□□□□□ -0.85
CPEB4-209ENST00000522336 LMOD1P29536 600 aaPredicted RBP9.77□□□□□ -0.85
CPEB4-209ENST00000522336 CAP2P40123 477 aa9.77□□□□□ -0.85
CPEB4-209ENST00000522336 UBE2HP62256 183 aa9.77□□□□□ -0.85
CPEB4-209ENST00000522336 USP17L2Q6R6M4 530 aa9.77□□□□□ -0.85
CPEB4-209ENST00000522336 CLEC10AQ8IUN9 316 aa9.77□□□□□ -0.85
CPEB4-209ENST00000522336 CDAN1Q8IWY9 1227 aa9.77□□□□□ -0.85
CPEB4-209ENST00000522336 DIS3L2Q8IYB7 885 aaKnown RBP9.77□□□□□ -0.85
CPEB4-209ENST00000522336 LRRC47Q8N1G4 583 aaKnown RBP9.77□□□□□ -0.85
CPEB4-209ENST00000522336 ZNF713Q8N859 430 aaPredicted RBP9.77□□□□□ -0.85
CPEB4-209ENST00000522336 TRPM4Q8TD43 1214 aa9.77□□□□□ -0.85
CPEB4-209ENST00000522336 L3MBTL3Q96JM7 780 aaPredicted RBP9.77□□□□□ -0.85
CPEB4-209ENST00000522336 SPATA32Q96LK8 384 aa9.77□□□□□ -0.85
CPEB4-209ENST00000522336 DEFB129Q9H1M3 183 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms