RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 ZNF112Q9UJU3 913 aa15.26■□□□□ 0.03
CPNE3-205ENST00000522240 ZBTB21Q9ULJ3 1066 aa15.26■□□□□ 0.03
CPNE3-205ENST00000522240 NAP1L2Q9ULW6 460 aaPredicted RBP15.26■□□□□ 0.03
CPNE3-205ENST00000522240 STX8Q9UNK0 236 aa15.26■□□□□ 0.03
CPNE3-205ENST00000522240 CCDC196A0A1B0GTZ2 297 aa15.25■□□□□ 0.03
CPNE3-205ENST00000522240 PHF20L1A8MW92 1017 aa15.25■□□□□ 0.03
CPNE3-205ENST00000522240 ADM5C9JUS6 153 aa15.25■□□□□ 0.03
CPNE3-205ENST00000522240 GH2P01242 217 aa15.25■□□□□ 0.03
CPNE3-205ENST00000522240 ASNSP08243 561 aa15.25■□□□□ 0.03
CPNE3-205ENST00000522240 GUCY1A2P33402 732 aa15.25■□□□□ 0.03
CPNE3-205ENST00000522240 CAP2P40123 477 aa15.25■□□□□ 0.03
CPNE3-205ENST00000522240 ICA1Q05084 483 aa15.25■□□□□ 0.03
CPNE3-205ENST00000522240 TROAPQ12815 778 aa15.25■□□□□ 0.03
CPNE3-205ENST00000522240 RRP1BQ14684 758 aaKnown RBP15.25■□□□□ 0.03
CPNE3-205ENST00000522240 COL13A1Q5TAT6 717 aaPredicted RBP15.25■□□□□ 0.03
CPNE3-205ENST00000522240 MIGA2Q7L4E1 593 aa15.25■□□□□ 0.03
CPNE3-205ENST00000522240 NECAB1Q8N987 351 aa15.25■□□□□ 0.03
CPNE3-205ENST00000522240 TMEM47Q9BQJ4 181 aa15.25■□□□□ 0.03
CPNE3-205ENST00000522240 CWC22Q9HCG8 908 aaKnown RBP15.25■□□□□ 0.03
CPNE3-205ENST00000522240 RBM28Q9NW13 759 aaKnown RBP15.25■□□□□ 0.03
CPNE3-205ENST00000522240 OTOFQ9HC10 1997 aa15.25■□□□□ 0.03
CPNE3-205ENST00000522240 STK25O00506 426 aa15.24■□□□□ 0.03
CPNE3-205ENST00000522240 CTNND1O60716 968 aaKnown RBP15.24■□□□□ 0.03
CPNE3-205ENST00000522240 NF2P35240 595 aa15.24■□□□□ 0.03
CPNE3-205ENST00000522240 SEPT2Q15019 361 aa15.24■□□□□ 0.03
CPNE3-205ENST00000522240 RTN1Q16799 776 aa15.24■□□□□ 0.03
CPNE3-205ENST00000522240 CPLX2Q6PUV4 134 aaKnown RBP15.24■□□□□ 0.03
CPNE3-205ENST00000522240 CDC37L1Q7L3B6 337 aa15.24■□□□□ 0.03
CPNE3-205ENST00000522240 LDHDQ86WU2 507 aa15.24■□□□□ 0.03
CPNE3-205ENST00000522240 MKL1Q969V6 931 aa15.24■□□□□ 0.03
CPNE3-205ENST00000522240 CDKL5O76039 1030 aa15.23■□□□□ 0.03
CPNE3-205ENST00000522240 KIF5BP33176 963 aa15.23■□□□□ 0.03
CPNE3-205ENST00000522240 CCT2P78371 535 aaKnown RBP15.23■□□□□ 0.03
CPNE3-205ENST00000522240 HMGN5P82970 282 aaKnown RBP15.23■□□□□ 0.03
CPNE3-205ENST00000522240 SHROOM1Q2M3G4 852 aaPredicted RBP15.23■□□□□ 0.03
CPNE3-205ENST00000522240 NOL9Q5SY16 702 aaKnown RBP15.23■□□□□ 0.03
CPNE3-205ENST00000522240 USP48Q86UV5 1035 aa15.23■□□□□ 0.03
CPNE3-205ENST00000522240 NSUN7Q8NE18 718 aaKnown RBP15.23■□□□□ 0.03
CPNE3-205ENST00000522240 CTCFLQ8NI51 663 aaPredicted RBP15.23■□□□□ 0.03
CPNE3-205ENST00000522240 SMARCC2Q8TAQ2 1214 aa15.23■□□□□ 0.03
CPNE3-205ENST00000522240 CDCA5Q96FF9 252 aa15.23■□□□□ 0.03
CPNE3-205ENST00000522240 MYL10Q9BUA6 226 aa15.23■□□□□ 0.03
CPNE3-205ENST00000522240 NCOA5Q9HCD5 579 aaKnown RBP15.23■□□□□ 0.03
CPNE3-205ENST00000522240 SMC3Q9UQE7 1217 aa15.23■□□□□ 0.03
CPNE3-205ENST00000522240 CPLX1O14810 134 aa15.22■□□□□ 0.03
CPNE3-205ENST00000522240 DDIT3P35638 169 aa15.22■□□□□ 0.03
CPNE3-205ENST00000522240 JAG1P78504 1218 aa15.22■□□□□ 0.03
CPNE3-205ENST00000522240 GRM4Q14833 912 aa15.22■□□□□ 0.03
CPNE3-205ENST00000522240 RAB3GAP1Q15042 981 aa15.22■□□□□ 0.03
CPNE3-205ENST00000522240 CLEC10AQ8IUN9 316 aa15.22■□□□□ 0.03
CPNE3-205ENST00000522240 FANCBQ8NB91 859 aa15.22■□□□□ 0.03
CPNE3-205ENST00000522240 NUP133Q8WUM0 1156 aa15.22■□□□□ 0.03
CPNE3-205ENST00000522240 WRNIP1Q96S55 665 aa15.22■□□□□ 0.03
CPNE3-205ENST00000522240 SH2D4AQ9H788 454 aa15.22■□□□□ 0.03
CPNE3-205ENST00000522240 ARHGEF10LQ9HCE6 1279 aa15.22■□□□□ 0.03
CPNE3-205ENST00000522240 FAM217BQ9NTX9 383 aaPredicted RBP15.22■□□□□ 0.03
CPNE3-205ENST00000522240 CLIP2Q9UDT6 1046 aa15.22■□□□□ 0.03
CPNE3-205ENST00000522240 STK36Q9NRP7 1315 aa15.21■□□□□ 0.03
CPNE3-205ENST00000522240 PTPDC1A2A3K4 754 aa15.21■□□□□ 0.03
CPNE3-205ENST00000522240 CTDNEP1O95476 244 aa15.21■□□□□ 0.03
CPNE3-205ENST00000522240 POTEIP0CG38 1075 aa15.21■□□□□ 0.03
CPNE3-205ENST00000522240 POTEJP0CG39 1038 aa15.21■□□□□ 0.03
CPNE3-205ENST00000522240 SNHG28P0DPA3 235 aa15.21■□□□□ 0.03
CPNE3-205ENST00000522240 EEF2P13639 858 aaKnown RBP15.21■□□□□ 0.03
CPNE3-205ENST00000522240 IFNAR1P17181 557 aa15.21■□□□□ 0.03
CPNE3-205ENST00000522240 RXRAP19793 462 aa15.21■□□□□ 0.03
CPNE3-205ENST00000522240 CDC27P30260 824 aa15.21■□□□□ 0.03
CPNE3-205ENST00000522240 GNAQP50148 359 aa15.21■□□□□ 0.03
CPNE3-205ENST00000522240 PRAMEF18Q5VWM3 479 aa15.21■□□□□ 0.03
CPNE3-205ENST00000522240 RAB11FIP4Q86YS3 637 aa15.21■□□□□ 0.03
CPNE3-205ENST00000522240 SCYL3Q8IZE3 742 aa15.21■□□□□ 0.03
CPNE3-205ENST00000522240 LRRC47Q8N1G4 583 aaKnown RBP15.21■□□□□ 0.03
CPNE3-205ENST00000522240 GMCL1P1Q8NEA9 526 aa15.21■□□□□ 0.03
CPNE3-205ENST00000522240 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.21■□□□□ 0.03
CPNE3-205ENST00000522240 GLIS2Q9BZE0 524 aaPredicted RBP15.21■□□□□ 0.03
CPNE3-205ENST00000522240 KIF3AQ9Y496 699 aa15.21■□□□□ 0.03
CPNE3-205ENST00000522240 PPP1R12BO60237 982 aaPredicted RBP15.2■□□□□ 0.02
CPNE3-205ENST00000522240 GJB2P29033 226 aa15.2■□□□□ 0.02
CPNE3-205ENST00000522240 INPP5BP32019 993 aa15.2■□□□□ 0.02
CPNE3-205ENST00000522240 NTRK3Q16288 839 aa15.2■□□□□ 0.02
CPNE3-205ENST00000522240 MAP3K11Q16584 847 aa15.2■□□□□ 0.02
CPNE3-205ENST00000522240 ASPRV1Q53RT3 343 aa15.2■□□□□ 0.02
CPNE3-205ENST00000522240 TMTC3Q6ZXV5 915 aa15.2■□□□□ 0.02
CPNE3-205ENST00000522240 CCDC144CPQ8IYA2 1237 aa15.2■□□□□ 0.02
CPNE3-205ENST00000522240 TNS4Q8IZW8 715 aa15.2■□□□□ 0.02
CPNE3-205ENST00000522240 PHIPQ8WWQ0 1821 aa15.2■□□□□ 0.02
CPNE3-205ENST00000522240 JAK2O60674 1132 aa15.19■□□□□ 0.02
CPNE3-205ENST00000522240 PDHBP11177 359 aa15.19■□□□□ 0.02
CPNE3-205ENST00000522240 PYGBP11216 843 aa15.19■□□□□ 0.02
CPNE3-205ENST00000522240 PDIA4P13667 645 aaKnown RBP15.19■□□□□ 0.02
CPNE3-205ENST00000522240 ADD1P35611 737 aaKnown RBP15.19■□□□□ 0.02
CPNE3-205ENST00000522240 IREB2P48200 963 aaKnown RBP15.19■□□□□ 0.02
CPNE3-205ENST00000522240 ATP2B2Q01814 1243 aa15.19■□□□□ 0.02
CPNE3-205ENST00000522240 SIAH1Q8IUQ4 282 aa15.19■□□□□ 0.02
CPNE3-205ENST00000522240 DCAF4Q8WV16 495 aa15.19■□□□□ 0.02
CPNE3-205ENST00000522240 LZTS2Q9BRK4 669 aa15.19■□□□□ 0.02
CPNE3-205ENST00000522240 MAD2L2Q9UI95 211 aa15.19■□□□□ 0.02
CPNE3-205ENST00000522240 TMX2Q9Y320 296 aa15.19■□□□□ 0.02
CPNE3-205ENST00000522240 CNTNAP5Q8WYK1 1306 aa15.18■□□□□ 0.02
CPNE3-205ENST00000522240 PALM3A6NDB9 673 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms