RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 RASA1P20936 1047 aa8.06□□□□□ -1.12
SPIDR-218ENST00000522222 CTGFP29279 349 aa8.06□□□□□ -1.12
SPIDR-218ENST00000522222 IRX3P78415 501 aaPredicted RBP8.06□□□□□ -1.12
SPIDR-218ENST00000522222 PABPC4Q13310 644 aaKnown RBP eCLIP8.06□□□□□ -1.12
SPIDR-218ENST00000522222 MCMDC2Q4G0Z9 681 aa8.06□□□□□ -1.12
SPIDR-218ENST00000522222 FBXO46Q6PJ61 603 aaPredicted RBP8.06□□□□□ -1.12
SPIDR-218ENST00000522222 USP17L2Q6R6M4 530 aa8.06□□□□□ -1.12
SPIDR-218ENST00000522222 TICAM2Q86XR7 235 aa8.06□□□□□ -1.12
SPIDR-218ENST00000522222 IFNL3Q8IZI9 196 aa8.06□□□□□ -1.12
SPIDR-218ENST00000522222 CCDC17Q96LX7 622 aa8.06□□□□□ -1.12
SPIDR-218ENST00000522222 NACAP1Q9BZK3 213 aa8.06□□□□□ -1.12
SPIDR-218ENST00000522222 KIAA1683Q9H0B3 1180 aa8.06□□□□□ -1.12
SPIDR-218ENST00000522222 ASCC2Q9H1I8 757 aaPredicted RBP8.06□□□□□ -1.12
SPIDR-218ENST00000522222 EFCC1Q9HA90 598 aa8.06□□□□□ -1.12
SPIDR-218ENST00000522222 DIAPH3Q9NSV4 1193 aa8.06□□□□□ -1.12
SPIDR-218ENST00000522222 EMILIN3Q9NT22 766 aa8.06□□□□□ -1.12
SPIDR-218ENST00000522222 HPS5Q9UPZ3 1129 aa8.06□□□□□ -1.12
SPIDR-218ENST00000522222 PLIN4Q96Q06 1357 aa8.06□□□□□ -1.12
SPIDR-218ENST00000522222 A0A1W2PRG0 241 aa8.05□□□□□ -1.12
SPIDR-218ENST00000522222 K7ELQ4 463 aaPredicted RBP8.05□□□□□ -1.12
SPIDR-218ENST00000522222 PRDM1O75626 825 aa8.05□□□□□ -1.12
SPIDR-218ENST00000522222 HSP90AA1P07900 732 aaKnown RBP8.05□□□□□ -1.12
SPIDR-218ENST00000522222 OSBPP22059 807 aa8.05□□□□□ -1.12
SPIDR-218ENST00000522222 MRE11P49959 708 aa8.05□□□□□ -1.12
SPIDR-218ENST00000522222 PPARAQ07869 468 aa8.05□□□□□ -1.12
SPIDR-218ENST00000522222 RABEP1Q15276 862 aa8.05□□□□□ -1.12
SPIDR-218ENST00000522222 PKN2Q16513 984 aaKnown RBP8.05□□□□□ -1.12
SPIDR-218ENST00000522222 FAM110CQ1W6H9 321 aa8.05□□□□□ -1.12
SPIDR-218ENST00000522222 TRIM47Q96LD4 638 aa8.05□□□□□ -1.12
SPIDR-218ENST00000522222 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.05□□□□□ -1.12
SPIDR-218ENST00000522222 A0A0G2JMZ2 1700 aa8.05□□□□□ -1.12
SPIDR-218ENST00000522222 ZMYM6O95789 1325 aa8.04□□□□□ -1.12
SPIDR-218ENST00000522222 REC8O95072 547 aa8.04□□□□□ -1.12
SPIDR-218ENST00000522222 HOXA7P31268 230 aaPredicted RBP8.04□□□□□ -1.12
SPIDR-218ENST00000522222 DDIT3P35638 169 aa8.04□□□□□ -1.12
SPIDR-218ENST00000522222 USP14P54578 494 aa8.04□□□□□ -1.12
SPIDR-218ENST00000522222 HERVK_113P62684 666 aa8.04□□□□□ -1.12
SPIDR-218ENST00000522222 ATP2B2Q01814 1243 aa8.04□□□□□ -1.12
SPIDR-218ENST00000522222 KIF22Q14807 665 aa8.04□□□□□ -1.12
SPIDR-218ENST00000522222 ALX1Q15699 326 aa8.04□□□□□ -1.12
SPIDR-218ENST00000522222 KIAA1755Q5JYT7 1200 aa8.04□□□□□ -1.12
SPIDR-218ENST00000522222 CWC27Q6UX04 472 aaKnown RBP8.04□□□□□ -1.12
SPIDR-218ENST00000522222 SIAH1Q8IUQ4 282 aa8.04□□□□□ -1.12
SPIDR-218ENST00000522222 ANKRD13CQ8N6S4 541 aa8.04□□□□□ -1.12
SPIDR-218ENST00000522222 IL25Q9H293 177 aa8.04□□□□□ -1.12
SPIDR-218ENST00000522222 RPAP3Q9H6T3 665 aaPredicted RBP8.04□□□□□ -1.12
SPIDR-218ENST00000522222 MKNK2Q9HBH9 465 aa8.04□□□□□ -1.12
SPIDR-218ENST00000522222 ARHGEF10LQ9HCE6 1279 aa8.04□□□□□ -1.12
SPIDR-218ENST00000522222 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.04□□□□□ -1.12
SPIDR-218ENST00000522222 PTCH2Q9Y6C5 1203 aa8.04□□□□□ -1.12
SPIDR-218ENST00000522222 MGAMO43451 1857 aa8.04□□□□□ -1.12
SPIDR-218ENST00000522222 IGKV6D-41A0A0C4DH26 115 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 FSD2A1L4K1 749 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 CCDC85CA6NKD9 419 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 USP17L15C9J2P7 530 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 USP17L13C9JLJ4 530 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 USP17L11C9JVI0 530 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 USP17L18D6R9N7 530 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 USP17L22D6RA61 530 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 USP17L17D6RBQ6 530 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 USP17L19D6RCP7 530 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 USP17L20D6RJB6 530 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 HIP1O00291 1037 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 EPB41L2O43491 1005 aaKnown RBP8.03□□□□□ -1.12
SPIDR-218ENST00000522222 TRAK2O60296 914 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 PEX10O60683 326 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 SLC3A2P08195 630 aaKnown RBP8.03□□□□□ -1.12
SPIDR-218ENST00000522222 HSPD1P10809 573 aaKnown RBP8.03□□□□□ -1.12
SPIDR-218ENST00000522222 EEF2P13639 858 aaKnown RBP8.03□□□□□ -1.12
SPIDR-218ENST00000522222 PSMC4P43686 418 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 GCLCP48506 637 aaPredicted RBP8.03□□□□□ -1.12
SPIDR-218ENST00000522222 FCGRTP55899 365 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 NUCB2P80303 420 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 CTDSPL2Q05D32 466 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 USP17L24Q0WX57 530 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 ARHGEF6Q15052 776 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 CLEC17AQ6ZS10 378 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 TBC1D10CQ8IV04 446 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 SPICE1Q8N0Z3 855 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 NBPF3Q9H094 633 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 SH2D4AQ9H788 454 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 VCPKMTQ9H867 229 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 KANSL2Q9H9L4 492 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 ZNF287Q9HBT7 754 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 CWC22Q9HCG8 908 aaKnown RBP8.03□□□□□ -1.12
SPIDR-218ENST00000522222 TXNRD2Q9NNW7 524 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 MORF4L1Q9UBU8 362 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 ANAPC4Q9UJX5 808 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 PTPN22Q9Y2R2 807 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 TMX2Q9Y320 296 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 TACC3Q9Y6A5 838 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 RLFQ13129 1914 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 PARP14Q460N5 1801 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 MYPNQ86TC9 1320 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 RAD50Q92878 1312 aa8.03□□□□□ -1.12
SPIDR-218ENST00000522222 MYH4Q9Y623 1939 aa8.02□□□□□ -1.13
SPIDR-218ENST00000522222 SPDYE16A6NNV3 312 aaPredicted RBP8.02□□□□□ -1.13
SPIDR-218ENST00000522222 ST18O60284 1047 aa8.02□□□□□ -1.13
SPIDR-218ENST00000522222 FMNL1O95466 1100 aaPredicted RBP8.02□□□□□ -1.13
SPIDR-218ENST00000522222 FGAP02671 866 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms