RNA–Protein interactions for RNA: ENST00000522163.5

RUNX1T1-240, Transcript of RUNX1 translocation partner 1, human

TSL 5

Gene RUNX1T1, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUNX1T1-240	ENST00000522163	FAM47A	Q5JRC9	791 aa		11.27	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	AKNAD1	Q5T1N1	836 aa		11.27	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	NAA16	Q6N069	864 aa	Predicted RBP	11.27	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	MIER1	Q8N108	512 aa		11.27	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	FLT1	P17948	1338 aa		11.27	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	RLF	Q13129	1914 aa		11.27	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.26	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	GRXCR1	A8MXD5	290 aa		11.26	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	COBL	O75128	1261 aa		11.26	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	GNAI2	P04899	355 aa		11.26	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	PLCG2	P16885	1265 aa		11.26	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	VCAM1	P19320	739 aa		11.26	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	PBX2	P40425	430 aa		11.26	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	DIEXF	Q68CQ4	756 aa	Known RBP	11.26	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	LBX2	Q6XYB7	198 aa		11.26	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	CLUAP1	Q96AJ1	413 aa		11.26	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	C1QTNF1	Q9BXJ1	281 aa		11.26	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.26	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.26	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	XPNPEP3	Q9NQH7	507 aa		11.26	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	SLC5A4	Q9NY91	659 aa		11.26	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	PHF24	Q9UPV7	400 aa		11.26	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	ERCC3	P19447	782 aa		11.25	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	PPP4C	P60510	307 aa		11.25	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	FAAP100	Q0VG06	881 aa		11.25	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	ZKSCAN2	Q63HK3	967 aa		11.25	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	RNF180	Q86T96	592 aa		11.25	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	SLC44A5	Q8NCS7	719 aa		11.25	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	ACER1	Q8TDN7	264 aa		11.25	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	NECAB3	Q96P71	396 aa	Predicted RBP	11.25	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	PBX4	Q9BYU1	374 aa		11.25	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	KIAA1683	Q9H0B3	1180 aa		11.25	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	SNRK	Q9NRH2	765 aa		11.25	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.25	□□□□□ -0.61
RUNX1T1-240	ENST00000522163		A0A1W2PQ45	241 aa	Predicted RBP	11.24	□□□□□ -0.61
RUNX1T1-240	ENST00000522163		A0A1W2PQY0	241 aa		11.24	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	DCDC2C	A8MYV0	355 aa		11.24	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	PGK1	P00558	417 aa		11.24	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	RARB	P10826	455 aa		11.24	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	ARID4A	P29374	1257 aa	Predicted RBP	11.24	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	MCAM	P43121	646 aa		11.24	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	ADGRE1	Q14246	886 aa		11.24	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	PLS1	Q14651	629 aa		11.24	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	COG2	Q14746	738 aa		11.24	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	ABCB5	Q2M3G0	1257 aa		11.24	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	CERKL	Q49MI3	558 aa	Predicted RBP	11.24	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	TATDN1	Q6P1N9	297 aa		11.24	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	ADGRA1	Q86SQ6	560 aa		11.24	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	TMEM57	Q8N5G2	664 aa		11.24	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.24	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	CABP5	Q9NP86	173 aa		11.24	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	HOXC10	Q9NYD6	342 aa		11.24	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	PNMA6E	A0A0J9YXQ4	647 aa		11.23	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	TIMP1	P01033	207 aa		11.23	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	UQCRFS1P1	P0C7P4	283 aa		11.23	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	DYNLL1	P63167	89 aa	Known RBP	11.23	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	CCDC174	Q6PII3	467 aa		11.23	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	NCAPG2	Q86XI2	1143 aa		11.23	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	MAML3	Q96JK9	1138 aa		11.23	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	SPATC1L	Q9H0A9	340 aa		11.23	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	HCN4	Q9Y3Q4	1203 aa		11.23	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	SIPA1L1	O43166	1804 aa		11.23	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	USP5	P45974	858 aa		11.22	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	TMEM240	Q5SV17	173 aa		11.22	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	MFSD5	Q6N075	450 aa		11.22	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	C16orf59	Q7L2K0	433 aa		11.22	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	ANKRD33	Q7Z3H0	272 aa		11.22	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	SHCBP1	Q8NEM2	672 aa		11.22	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	TOX2	Q96NM4	488 aa		11.22	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	TANGO6	Q9C0B7	1094 aa		11.22	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	MROH8	Q9H579	483 aa		11.22	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	STARD7	Q9NQZ5	370 aa		11.22	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	MSRA	Q9UJ68	235 aa		11.22	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	ACR	P10323	421 aa		11.21	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	FCER1A	P12319	257 aa		11.21	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	BMP1	P13497	986 aa		11.21	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	PPIG	Q13427	754 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	TTC39A	Q5SRH9	613 aa		11.21	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.21	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	FTSJ3	Q8IY81	847 aa	Known RBP	11.21	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	MICALL1	Q8N3F8	863 aa		11.21	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	NUP133	Q8WUM0	1156 aa		11.21	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	LRFN3	Q9BTN0	628 aa		11.21	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	NKX2-4	Q9H2Z4	354 aa		11.21	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.21	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	SERPINB13	Q9UIV8	391 aa		11.21	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.21	□□□□□ -0.61
RUNX1T1-240	ENST00000522163	SYNGAP1	Q96PV0	1343 aa		11.2	□□□□□ -0.62
RUNX1T1-240	ENST00000522163	APBB1	O00213	710 aa		11.2	□□□□□ -0.62
RUNX1T1-240	ENST00000522163	PGK2	P07205	417 aa		11.2	□□□□□ -0.62
RUNX1T1-240	ENST00000522163	CSF2RA	P15509	400 aa		11.2	□□□□□ -0.62
RUNX1T1-240	ENST00000522163	TAL1	P17542	331 aa	Predicted RBP	11.2	□□□□□ -0.62
RUNX1T1-240	ENST00000522163	ACLY	P53396	1101 aa		11.2	□□□□□ -0.62
RUNX1T1-240	ENST00000522163	TFF2	Q03403	129 aa		11.2	□□□□□ -0.62
RUNX1T1-240	ENST00000522163	SEPT2	Q15019	361 aa		11.2	□□□□□ -0.62
RUNX1T1-240	ENST00000522163	RAB30	Q15771	203 aa		11.2	□□□□□ -0.62
RUNX1T1-240	ENST00000522163	ZNF365	Q70YC5	407 aa		11.2	□□□□□ -0.62
RUNX1T1-240	ENST00000522163	TTC6	Q86TZ1	520 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms