RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.91■■□□□ 1.58
R3HCC1-208ENST00000522012 SSC5DA1L4H1 1573 aa24.9■■□□□ 1.58
R3HCC1-208ENST00000522012 CDKL5O76039 1030 aa24.9■■□□□ 1.58
R3HCC1-208ENST00000522012 KIF5BP33176 963 aa24.9■■□□□ 1.58
R3HCC1-208ENST00000522012 NF2P35240 595 aa24.9■■□□□ 1.58
R3HCC1-208ENST00000522012 SMARCC2Q8TAQ2 1214 aa24.9■■□□□ 1.58
R3HCC1-208ENST00000522012 MKL1Q969V6 931 aa24.9■■□□□ 1.58
R3HCC1-208ENST00000522012 MAP3K14Q99558 947 aa24.9■■□□□ 1.58
R3HCC1-208ENST00000522012 RAD21O60216 631 aa24.89■■□□□ 1.57
R3HCC1-208ENST00000522012 PPP1R12BO60237 982 aaPredicted RBP24.89■■□□□ 1.57
R3HCC1-208ENST00000522012 USP2O75604 605 aaPredicted RBP24.89■■□□□ 1.57
R3HCC1-208ENST00000522012 DDIT3P35638 169 aa24.89■■□□□ 1.57
R3HCC1-208ENST00000522012 GRM4Q14833 912 aa24.89■■□□□ 1.57
R3HCC1-208ENST00000522012 LDHDQ86WU2 507 aa24.89■■□□□ 1.57
R3HCC1-208ENST00000522012 KLRG1Q96E93 195 aa24.89■■□□□ 1.57
R3HCC1-208ENST00000522012 ARHGEF10LQ9HCE6 1279 aa24.89■■□□□ 1.57
R3HCC1-208ENST00000522012 GINM1Q9NU53 330 aa24.89■■□□□ 1.57
R3HCC1-208ENST00000522012 CEP350Q5VT06 3117 aa24.89■■□□□ 1.57
R3HCC1-208ENST00000522012 KIF3CO14782 793 aa24.88■■□□□ 1.57
R3HCC1-208ENST00000522012 HMGN5P82970 282 aaKnown RBP24.88■■□□□ 1.57
R3HCC1-208ENST00000522012 CMTR1Q8N1G2 835 aaKnown RBP24.88■■□□□ 1.57
R3HCC1-208ENST00000522012 CCDC82Q8N4S0 544 aa24.88■■□□□ 1.57
R3HCC1-208ENST00000522012 ZKSCAN4Q969J2 545 aaPredicted RBP24.88■■□□□ 1.57
R3HCC1-208ENST00000522012 USP17L5A8MUK1 530 aa24.87■■□□□ 1.57
R3HCC1-208ENST00000522012 NTRK3Q16288 839 aa24.87■■□□□ 1.57
R3HCC1-208ENST00000522012 CCDC84Q86UT8 332 aaPredicted RBP24.87■■□□□ 1.57
R3HCC1-208ENST00000522012 SCYL3Q8IZE3 742 aa24.87■■□□□ 1.57
R3HCC1-208ENST00000522012 FAM184AQ8NB25 1140 aa24.87■■□□□ 1.57
R3HCC1-208ENST00000522012 PHKBQ93100 1093 aa24.87■■□□□ 1.57
R3HCC1-208ENST00000522012 PLEKHA8P1O95397 391 aa24.86■■□□□ 1.57
R3HCC1-208ENST00000522012 PARP1P09874 1014 aaKnown RBP24.86■■□□□ 1.57
R3HCC1-208ENST00000522012 USP17L2Q6R6M4 530 aa24.86■■□□□ 1.57
R3HCC1-208ENST00000522012 RASGRP2Q7LDG7 609 aa24.86■■□□□ 1.57
R3HCC1-208ENST00000522012 ACER1Q8TDN7 264 aa24.86■■□□□ 1.57
R3HCC1-208ENST00000522012 PICK1Q9NRD5 415 aa24.86■■□□□ 1.57
R3HCC1-208ENST00000522012 CHMP5Q9NZZ3 219 aa24.86■■□□□ 1.57
R3HCC1-208ENST00000522012 MAD2L2Q9UI95 211 aa24.86■■□□□ 1.57
R3HCC1-208ENST00000522012 MYH8P13535 1937 aa24.86■■□□□ 1.57
R3HCC1-208ENST00000522012 A0A1W2PRG0 241 aa24.86■■□□□ 1.57
R3HCC1-208ENST00000522012 GOLGA8HP0CJ92 632 aa24.86■■□□□ 1.57
R3HCC1-208ENST00000522012 PDHBP11177 359 aa24.86■■□□□ 1.57
R3HCC1-208ENST00000522012 IFNAR1P17181 557 aa24.86■■□□□ 1.57
R3HCC1-208ENST00000522012 SSRP1Q08945 709 aaKnown RBP24.86■■□□□ 1.57
R3HCC1-208ENST00000522012 TTLL12Q14166 644 aaPredicted RBP24.86■■□□□ 1.57
R3HCC1-208ENST00000522012 TMTC3Q6ZXV5 915 aa24.86■■□□□ 1.57
R3HCC1-208ENST00000522012 STAG2Q8N3U4 1231 aa24.86■■□□□ 1.57
R3HCC1-208ENST00000522012 SLC26A6Q9BXS9 759 aa24.86■■□□□ 1.57
R3HCC1-208ENST00000522012 ORC3Q9UBD5 711 aaPredicted RBP24.86■■□□□ 1.57
R3HCC1-208ENST00000522012 CIZ1Q9ULV3 898 aaPredicted RBP24.86■■□□□ 1.57
R3HCC1-208ENST00000522012 TRAF5O00463 557 aa24.85■■□□□ 1.57
R3HCC1-208ENST00000522012 ECE1P42892 770 aa24.85■■□□□ 1.57
R3HCC1-208ENST00000522012 GNAQP50148 359 aa24.85■■□□□ 1.57
R3HCC1-208ENST00000522012 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.85■■□□□ 1.57
R3HCC1-208ENST00000522012 GREB1LQ9C091 1923 aaPredicted RBP24.85■■□□□ 1.57
R3HCC1-208ENST00000522012 PALM3A6NDB9 673 aaPredicted RBP24.84■■□□□ 1.57
R3HCC1-208ENST00000522012 F5H6K3 240 aa24.84■■□□□ 1.57
R3HCC1-208ENST00000522012 FDPSP14324 419 aaKnown RBP24.84■■□□□ 1.57
R3HCC1-208ENST00000522012 IREB2P48200 963 aaKnown RBP24.84■■□□□ 1.57
R3HCC1-208ENST00000522012 MAP3K9P80192 1104 aa24.84■■□□□ 1.57
R3HCC1-208ENST00000522012 KLRC3Q07444 240 aa24.84■■□□□ 1.57
R3HCC1-208ENST00000522012 SLFN13Q68D06 897 aa24.84■■□□□ 1.57
R3HCC1-208ENST00000522012 SRBD1Q8N5C6 995 aaKnown RBP24.84■■□□□ 1.57
R3HCC1-208ENST00000522012 SH2D4AQ9H788 454 aa24.84■■□□□ 1.57
R3HCC1-208ENST00000522012 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.84■■□□□ 1.57
R3HCC1-208ENST00000522012 SYNPO2Q9UMS6 1093 aa24.84■■□□□ 1.57
R3HCC1-208ENST00000522012 TMX2Q9Y320 296 aa24.84■■□□□ 1.57
R3HCC1-208ENST00000522012 KIF3AQ9Y496 699 aa24.84■■□□□ 1.57
R3HCC1-208ENST00000522012 FRMPD2Q68DX3 1309 aaPredicted RBP24.84■■□□□ 1.57
R3HCC1-208ENST00000522012 FMNL1O95466 1100 aaPredicted RBP24.83■■□□□ 1.57
R3HCC1-208ENST00000522012 CCDC96Q2M329 555 aa24.83■■□□□ 1.57
R3HCC1-208ENST00000522012 LARP1BQ659C4 914 aaKnown RBP24.83■■□□□ 1.57
R3HCC1-208ENST00000522012 NBPF11Q86T75 865 aa24.83■■□□□ 1.57
R3HCC1-208ENST00000522012 TRIM22Q8IYM9 498 aa24.83■■□□□ 1.57
R3HCC1-208ENST00000522012 GMCL1P1Q8NEA9 526 aa24.83■■□□□ 1.57
R3HCC1-208ENST00000522012 ISY1Q9ULR0 285 aaKnown RBP24.83■■□□□ 1.57
R3HCC1-208ENST00000522012 KLRF2D3W0D1 207 aa24.82■■□□□ 1.56
R3HCC1-208ENST00000522012 SNHG28P0DPA3 235 aa24.82■■□□□ 1.56
R3HCC1-208ENST00000522012 ASPRV1Q53RT3 343 aa24.82■■□□□ 1.56
R3HCC1-208ENST00000522012 NOL9Q5SY16 702 aaKnown RBP24.82■■□□□ 1.56
R3HCC1-208ENST00000522012 FEZ1Q99689 392 aa24.82■■□□□ 1.56
R3HCC1-208ENST00000522012 LZTS2Q9BRK4 669 aa24.82■■□□□ 1.56
R3HCC1-208ENST00000522012 ZNF408Q9H9D4 720 aa24.82■■□□□ 1.56
R3HCC1-208ENST00000522012 GOPCQ9HD26 462 aa24.82■■□□□ 1.56
R3HCC1-208ENST00000522012 GPCPD1Q9NPB8 672 aa24.82■■□□□ 1.56
R3HCC1-208ENST00000522012 PTPRAP18433 802 aa24.81■■□□□ 1.56
R3HCC1-208ENST00000522012 PDCP20941 246 aa24.81■■□□□ 1.56
R3HCC1-208ENST00000522012 SYT1P21579 422 aa24.81■■□□□ 1.56
R3HCC1-208ENST00000522012 AKAP17AQ02040 695 aaKnown RBP24.81■■□□□ 1.56
R3HCC1-208ENST00000522012 ZNF543Q08ER8 600 aa24.81■■□□□ 1.56
R3HCC1-208ENST00000522012 FUT2Q10981 343 aa24.81■■□□□ 1.56
R3HCC1-208ENST00000522012 ZYXQ15942 572 aaKnown RBP24.81■■□□□ 1.56
R3HCC1-208ENST00000522012 DCAF4Q8WV16 495 aa24.81■■□□□ 1.56
R3HCC1-208ENST00000522012 CSADQ9Y600 493 aa24.81■■□□□ 1.56
R3HCC1-208ENST00000522012 NDUFB10O96000 172 aa24.81■■□□□ 1.56
R3HCC1-208ENST00000522012 SLC1A4P43007 532 aa24.81■■□□□ 1.56
R3HCC1-208ENST00000522012 FOSBP53539 338 aa24.81■■□□□ 1.56
R3HCC1-208ENST00000522012 NUCB2P80303 420 aa24.81■■□□□ 1.56
R3HCC1-208ENST00000522012 FMR1Q06787 632 aaKnown RBP eCLIP24.81■■□□□ 1.56
R3HCC1-208ENST00000522012 PKP1Q13835 747 aa24.81■■□□□ 1.56
R3HCC1-208ENST00000522012 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms