RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 CDC37L1Q7L3B6 337 aa7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 FBXO33Q7Z6M2 555 aa7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 CERS3Q8IU89 383 aa7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 SEPT12Q8IYM1 358 aa7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 MAGEB6Q8N7X4 407 aa7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 STAG1Q8WVM7 1258 aa7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 AGBL1Q96MI9 1066 aa7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 TCEANC2Q96MN5 208 aa7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 BRIP1Q9BX63 1249 aa7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 NAPBQ9H115 298 aa7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 CYLDQ9NQC7 956 aa7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 WWC3Q9ULE0 1092 aa7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 CNPY2Q9Y2B0 182 aa7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 LEMD3Q9Y2U8 911 aa7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 IRS2Q9Y4H2 1338 aa7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 COL1A1P02452 1464 aaPredicted RBP7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 LAMB1P07942 1786 aa7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 POM121CA8CG34 1229 aa7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 H3BQV1 296 aa7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 SH2B2O14492 632 aaPredicted RBP7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 RAD21O60216 631 aa7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 MBD4O95243 580 aa7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 CTDNEP1O95476 244 aa7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 RFC4P35249 363 aa7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 ANTXR2P58335 489 aa7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 DNM1Q05193 864 aaKnown RBP7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 APOBRQ0VD83 1088 aa7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 SART3Q15020 963 aaKnown RBP7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 UVSSAQ2YD98 709 aa7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 CCDC88AQ3V6T2 1871 aa7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 SLFNL1Q499Z3 407 aa7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 HS1BP3Q53T59 392 aa7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 AKNAD1Q5T1N1 836 aa7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 TMC4Q7Z404 712 aa7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 IFNL3Q8IZI9 196 aa7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 LINC00528Q8N1L1 170 aa7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 FAM43AQ8N2R8 423 aa7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 TMTC2Q8N394 836 aa7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 DDX19AQ9NUU7 478 aaKnown RBP7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 NRXN2Q9P2S2 1712 aa7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 DLEC1Q9Y238 1755 aa7.82□□□□□ -1.16
CTNNA1-228ENST00000521640 KLF18A0A0U1RQI7 1052 aa7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 FAM177BA6PVY3 158 aa7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 GOLGA8BA8MQT2 603 aa7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 GSG1L2A8MUP6 293 aa7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 FIBPO43427 364 aa7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 JAK2O60674 1132 aa7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 FGRP09769 529 aa7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 TM4SF1P30408 202 aa7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 HSPA1LP34931 641 aa7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 SCTRP47872 440 aa7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 STK3Q13188 491 aa7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 GRAPQ13588 217 aa7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 CRY2Q49AN0 593 aa7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 FOXD4L5Q5VV16 416 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 SPTY2D1Q68D10 685 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 BRAPQ7Z569 592 aa7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 TTC6Q86TZ1 520 aa7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 TBC1D10CQ8IV04 446 aa7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 PHTF2Q8N3S3 785 aa7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 KDF1Q8NAX2 398 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 GRAPLQ8TC17 118 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 FOXD4L4Q8WXT5 416 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 CELF1Q92879 486 aaKnown RBP7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 PDLIM2Q96JY6 352 aa7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 FAM84BQ96KN1 310 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 ZNF396Q96N95 335 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 TSPY26PQ9H489 355 aa7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 EPB41L4AQ9HCS5 686 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 LRP2BPQ9P2M1 347 aa7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 BRPF3Q9ULD4 1205 aa7.81□□□□□ -1.16
CTNNA1-228ENST00000521640 BRWD3Q6RI45 1802 aa7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 CCDC196A0A1B0GTZ2 297 aa7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 SYCE3A1L190 88 aa7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 KLRG2A4D1S0 409 aaPredicted RBP7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 CPLX1O14810 134 aa7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 CAVIN2O95810 425 aa7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 APPP05067 770 aa7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 HIBADHP31937 336 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 HAND2P61296 217 aa7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 APOA5Q6Q788 366 aa7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 RBM43Q6ZSC3 357 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 MFSD6Q6ZSS7 791 aa7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 VPS37DQ86XT2 251 aa7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 CNBD1Q8NA66 436 aa7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 IGDCC4Q8TDY8 1250 aa7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 ADAMTS19Q8TE59 1207 aa7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 LEO1Q8WVC0 666 aaPredicted RBP7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 WASF1Q92558 559 aa7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 SPATA32Q96LK8 384 aa7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 ARID3AQ99856 593 aa7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 RIOK1Q9BRS2 568 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 SENP2Q9HC62 589 aa7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 ATP8A2Q9NTI2 1148 aa7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 SRP68Q9UHB9 627 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 RCOR1Q9UKL0 485 aa7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 NSFL1CQ9UNZ2 370 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 PCDHB11Q9Y5F2 797 aa7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 SLC4A4Q9Y6R1 1079 aa7.8□□□□□ -1.16
CTNNA1-228ENST00000521640 LTBP1Q14766 1721 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms