RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 ERVK-9P63128 1117 aa12.93□□□□□ -0.34
MRPS28-208ENST00000521605 ERVK-24P63145 666 aa12.93□□□□□ -0.34
MRPS28-208ENST00000521605 SH3D19Q5HYK7 790 aa12.93□□□□□ -0.34
MRPS28-208ENST00000521605 MFSD14CQ5VZR4 134 aa12.93□□□□□ -0.34
MRPS28-208ENST00000521605 ANO1Q5XXA6 986 aa12.93□□□□□ -0.34
MRPS28-208ENST00000521605 SH3RF1Q7Z6J0 888 aa12.93□□□□□ -0.34
MRPS28-208ENST00000521605 LPAR1Q92633 364 aa12.93□□□□□ -0.34
MRPS28-208ENST00000521605 KCNB2Q92953 911 aa12.93□□□□□ -0.34
MRPS28-208ENST00000521605 ANP32EQ9BTT0 268 aa12.93□□□□□ -0.34
MRPS28-208ENST00000521605 ABCF2Q9UG63 623 aa12.93□□□□□ -0.34
MRPS28-208ENST00000521605 SALL1Q9NSC2 1324 aa12.92□□□□□ -0.34
MRPS28-208ENST00000521605 TBC1D12O60347 775 aa12.92□□□□□ -0.34
MRPS28-208ENST00000521605 PHKA1P46020 1223 aa12.92□□□□□ -0.34
MRPS28-208ENST00000521605 MAP2K5Q13163 448 aa12.92□□□□□ -0.34
MRPS28-208ENST00000521605 LRRFIP1Q32MZ4 808 aaKnown RBP12.92□□□□□ -0.34
MRPS28-208ENST00000521605 SLC39A5Q6ZMH5 540 aa12.92□□□□□ -0.34
MRPS28-208ENST00000521605 EDC3Q96F86 508 aaKnown RBP12.92□□□□□ -0.34
MRPS28-208ENST00000521605 UHRF1Q96T88 793 aaPredicted RBP12.92□□□□□ -0.34
MRPS28-208ENST00000521605 CCDC8Q9H0W5 538 aaPredicted RBP12.92□□□□□ -0.34
MRPS28-208ENST00000521605 PDLIM7Q9NR12 457 aa12.92□□□□□ -0.34
MRPS28-208ENST00000521605 DIAPH3Q9NSV4 1193 aa12.92□□□□□ -0.34
MRPS28-208ENST00000521605 DENND2AQ9ULE3 1009 aa12.92□□□□□ -0.34
MRPS28-208ENST00000521605 CIZ1Q9ULV3 898 aaPredicted RBP12.92□□□□□ -0.34
MRPS28-208ENST00000521605 TRIM43BA6NCK2 446 aa12.91□□□□□ -0.34
MRPS28-208ENST00000521605 ST18O60284 1047 aa12.91□□□□□ -0.34
MRPS28-208ENST00000521605 CYP2C19P33261 490 aa12.91□□□□□ -0.34
MRPS28-208ENST00000521605 HSPA4P34932 840 aa12.91□□□□□ -0.34
MRPS28-208ENST00000521605 EPHB4P54760 987 aa12.91□□□□□ -0.34
MRPS28-208ENST00000521605 BACE1P56817 501 aa12.91□□□□□ -0.34
MRPS28-208ENST00000521605 ATP2B2Q01814 1243 aa12.91□□□□□ -0.34
MRPS28-208ENST00000521605 ATP2B3Q16720 1220 aa12.91□□□□□ -0.34
MRPS28-208ENST00000521605 FERMT2Q96AC1 680 aa12.91□□□□□ -0.34
MRPS28-208ENST00000521605 TRIM43Q96BQ3 446 aaPredicted RBP12.91□□□□□ -0.34
MRPS28-208ENST00000521605 ASB2Q96Q27 587 aa12.91□□□□□ -0.34
MRPS28-208ENST00000521605 ANTXR1Q9H6X2 564 aa12.91□□□□□ -0.34
MRPS28-208ENST00000521605 TLR7Q9NYK1 1049 aaKnown RBP12.91□□□□□ -0.34
MRPS28-208ENST00000521605 THEGQ9P2T0 379 aa12.91□□□□□ -0.34
MRPS28-208ENST00000521605 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.91□□□□□ -0.34
MRPS28-208ENST00000521605 MROH7-TTC4A0A0A0MT08 1334 aa12.9□□□□□ -0.34
MRPS28-208ENST00000521605 A0A1B0GUL7 405 aa12.9□□□□□ -0.34
MRPS28-208ENST00000521605 KBTBD13C9JR72 458 aa12.9□□□□□ -0.34
MRPS28-208ENST00000521605 MSCO60682 206 aa12.9□□□□□ -0.34
MRPS28-208ENST00000521605 DNAJB2P25686 324 aa12.9□□□□□ -0.34
MRPS28-208ENST00000521605 HOXA7P31268 230 aaPredicted RBP12.9□□□□□ -0.34
MRPS28-208ENST00000521605 CCDC85BQ15834 202 aaPredicted RBP12.9□□□□□ -0.34
MRPS28-208ENST00000521605 KIAA1211Q6ZU35 1233 aa12.9□□□□□ -0.34
MRPS28-208ENST00000521605 SLF2Q8IX21 1173 aa12.9□□□□□ -0.34
MRPS28-208ENST00000521605 ZGPATQ8N5A5 531 aaKnown RBP12.9□□□□□ -0.34
MRPS28-208ENST00000521605 KBTBD3Q8NAB2 608 aa12.9□□□□□ -0.34
MRPS28-208ENST00000521605 TRPV1Q8NER1 839 aa12.9□□□□□ -0.34
MRPS28-208ENST00000521605 ATXN2LQ8WWM7 1075 aaKnown RBP12.9□□□□□ -0.34
MRPS28-208ENST00000521605 DBNDD2Q9BQY9 259 aa12.9□□□□□ -0.34
MRPS28-208ENST00000521605 LSG1Q9H089 658 aaKnown RBP12.9□□□□□ -0.34
MRPS28-208ENST00000521605 ZNF576Q9H609 170 aa12.9□□□□□ -0.34
MRPS28-208ENST00000521605 RLFQ13129 1914 aa12.9□□□□□ -0.35
MRPS28-208ENST00000521605 K7ELQ4 463 aaPredicted RBP12.89□□□□□ -0.35
MRPS28-208ENST00000521605 ITGB8P26012 769 aa12.89□□□□□ -0.35
MRPS28-208ENST00000521605 ADCYAP1R1P41586 468 aa12.89□□□□□ -0.35
MRPS28-208ENST00000521605 RHBDL3P58872 404 aa12.89□□□□□ -0.35
MRPS28-208ENST00000521605 SHROOM1Q2M3G4 852 aaPredicted RBP12.89□□□□□ -0.35
MRPS28-208ENST00000521605 POTEEQ6S8J3 1075 aa12.89□□□□□ -0.35
MRPS28-208ENST00000521605 ARRDC4Q8NCT1 418 aa12.89□□□□□ -0.35
MRPS28-208ENST00000521605 NECAB3Q96P71 396 aaPredicted RBP12.89□□□□□ -0.35
MRPS28-208ENST00000521605 GAS2L1Q99501 681 aaPredicted RBP12.89□□□□□ -0.35
MRPS28-208ENST00000521605 WDR18Q9BV38 432 aa12.89□□□□□ -0.35
MRPS28-208ENST00000521605 TM6SF1Q9BZW5 370 aa12.89□□□□□ -0.35
MRPS28-208ENST00000521605 ANO2Q9NQ90 1003 aa12.89□□□□□ -0.35
MRPS28-208ENST00000521605 SEMA3EO15041 775 aa12.88□□□□□ -0.35
MRPS28-208ENST00000521605 ADORA1P30542 326 aa12.88□□□□□ -0.35
MRPS28-208ENST00000521605 DDIT3P35638 169 aa12.88□□□□□ -0.35
MRPS28-208ENST00000521605 JAG1P78504 1218 aa12.88□□□□□ -0.35
MRPS28-208ENST00000521605 MRPS5P82675 430 aaKnown RBP12.88□□□□□ -0.35
MRPS28-208ENST00000521605 MECOMQ03112 1051 aa12.88□□□□□ -0.35
MRPS28-208ENST00000521605 TLE2Q04725 743 aa12.88□□□□□ -0.35
MRPS28-208ENST00000521605 CCDC158Q5M9N0 1113 aa12.88□□□□□ -0.35
MRPS28-208ENST00000521605 TIFAQ96CG3 184 aa12.88□□□□□ -0.35
MRPS28-208ENST00000521605 BOLA2Q9H3K6 86 aa12.88□□□□□ -0.35
MRPS28-208ENST00000521605 BDP1A6H8Y1 2624 aa12.87□□□□□ -0.35
MRPS28-208ENST00000521605 GPR75-ASB3A0A0A6YYF3 556 aa12.87□□□□□ -0.35
MRPS28-208ENST00000521605 USP17L10C9JJH3 530 aa12.87□□□□□ -0.35
MRPS28-208ENST00000521605 IGSF3O75054 1194 aa12.87□□□□□ -0.35
MRPS28-208ENST00000521605 GDF11O95390 407 aa12.87□□□□□ -0.35
MRPS28-208ENST00000521605 ZFYP08048 801 aaPredicted RBP12.87□□□□□ -0.35
MRPS28-208ENST00000521605 PTPREP23469 700 aa12.87□□□□□ -0.35
MRPS28-208ENST00000521605 RASGRF1Q13972 1273 aa12.87□□□□□ -0.35
MRPS28-208ENST00000521605 ZYXQ15942 572 aaKnown RBP12.87□□□□□ -0.35
MRPS28-208ENST00000521605 TSGA10IPQ3SY00 556 aa12.87□□□□□ -0.35
MRPS28-208ENST00000521605 CCDC102BQ68D86 513 aa12.87□□□□□ -0.35
MRPS28-208ENST00000521605 NPLOC4Q8TAT6 608 aa12.87□□□□□ -0.35
MRPS28-208ENST00000521605 MAP4K1Q92918 833 aa12.87□□□□□ -0.35
MRPS28-208ENST00000521605 FAM163AQ96GL9 167 aaPredicted RBP12.87□□□□□ -0.35
MRPS28-208ENST00000521605 FSD1Q9BTV5 496 aa12.87□□□□□ -0.35
MRPS28-208ENST00000521605 PRDM12Q9H4Q4 367 aa12.87□□□□□ -0.35
MRPS28-208ENST00000521605 HELLSQ9NRZ9 838 aa12.87□□□□□ -0.35
MRPS28-208ENST00000521605 HMG20BQ9P0W2 317 aa12.87□□□□□ -0.35
MRPS28-208ENST00000521605 IVNS1ABPQ9Y6Y0 642 aa12.87□□□□□ -0.35
MRPS28-208ENST00000521605 CCDC171Q6TFL3 1326 aa12.87□□□□□ -0.35
MRPS28-208ENST00000521605 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.86□□□□□ -0.35
MRPS28-208ENST00000521605 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.86□□□□□ -0.35
MRPS28-208ENST00000521605 SLC15A5A6NIM6 579 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms