RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 RBPJLQ9UBG7 517 aa24.55■■□□□ 1.52
TRIM35-203ENST00000521253 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.55■■□□□ 1.52
TRIM35-203ENST00000521253 ZMYM6O95789 1325 aa24.55■■□□□ 1.52
TRIM35-203ENST00000521253 TNPO2O14787 897 aaKnown RBP24.54■■□□□ 1.52
TRIM35-203ENST00000521253 FAM47AQ5JRC9 791 aa24.54■■□□□ 1.52
TRIM35-203ENST00000521253 GTF3C2Q8WUA4 911 aaPredicted RBP24.54■■□□□ 1.52
TRIM35-203ENST00000521253 TACC3Q9Y6A5 838 aa24.54■■□□□ 1.52
TRIM35-203ENST00000521253 MYPNQ86TC9 1320 aa24.54■■□□□ 1.52
TRIM35-203ENST00000521253 GREB1LQ9C091 1923 aaPredicted RBP24.53■■□□□ 1.52
TRIM35-203ENST00000521253 TSPY3P0CV98 308 aa24.53■■□□□ 1.52
TRIM35-203ENST00000521253 TSPY8P0CW00 308 aa24.53■■□□□ 1.52
TRIM35-203ENST00000521253 PRKCZQ05513 592 aa24.53■■□□□ 1.52
TRIM35-203ENST00000521253 GPRC5AQ8NFJ5 357 aa24.53■■□□□ 1.52
TRIM35-203ENST00000521253 NEDD1Q8NHV4 660 aa24.53■■□□□ 1.52
TRIM35-203ENST00000521253 PAGR1Q9BTK6 254 aa24.53■■□□□ 1.52
TRIM35-203ENST00000521253 TANGO6Q9C0B7 1094 aa24.53■■□□□ 1.52
TRIM35-203ENST00000521253 NYAP2Q9P242 653 aa24.53■■□□□ 1.52
TRIM35-203ENST00000521253 TFAP4Q01664 338 aa24.52■■□□□ 1.52
TRIM35-203ENST00000521253 ARMC5Q96C12 935 aa24.52■■□□□ 1.52
TRIM35-203ENST00000521253 CEP95Q96GE4 821 aa24.52■■□□□ 1.52
TRIM35-203ENST00000521253 GABRQQ9UN88 632 aa24.52■■□□□ 1.52
TRIM35-203ENST00000521253 PLIN4Q96Q06 1357 aa24.52■■□□□ 1.52
TRIM35-203ENST00000521253 SPDYE16A6NNV3 312 aaPredicted RBP24.51■■□□□ 1.51
TRIM35-203ENST00000521253 SOX10P56693 466 aa24.51■■□□□ 1.51
TRIM35-203ENST00000521253 ERVK-9P63128 1117 aa24.51■■□□□ 1.51
TRIM35-203ENST00000521253 ERVK-24P63145 666 aa24.51■■□□□ 1.51
TRIM35-203ENST00000521253 Q3C1V9 767 aa24.51■■□□□ 1.51
TRIM35-203ENST00000521253 SLC9C1Q4G0N8 1177 aa24.51■■□□□ 1.51
TRIM35-203ENST00000521253 LBX2Q6XYB7 198 aa24.51■■□□□ 1.51
TRIM35-203ENST00000521253 IL25Q9H293 177 aa24.51■■□□□ 1.51
TRIM35-203ENST00000521253 GOPCQ9HD26 462 aa24.51■■□□□ 1.51
TRIM35-203ENST00000521253 MTMR4Q9NYA4 1195 aa24.51■■□□□ 1.51
TRIM35-203ENST00000521253 CLIP2Q9UDT6 1046 aa24.51■■□□□ 1.51
TRIM35-203ENST00000521253 WDR46O15213 610 aaKnown RBP24.5■■□□□ 1.51
TRIM35-203ENST00000521253 CNMDO75829 334 aa24.5■■□□□ 1.51
TRIM35-203ENST00000521253 FGRP09769 529 aa24.5■■□□□ 1.51
TRIM35-203ENST00000521253 HAND2P61296 217 aa24.5■■□□□ 1.51
TRIM35-203ENST00000521253 COG2Q14746 738 aa24.5■■□□□ 1.51
TRIM35-203ENST00000521253 SKAP1Q86WV1 359 aa24.5■■□□□ 1.51
TRIM35-203ENST00000521253 RAET1EQ8TD07 263 aa24.5■■□□□ 1.51
TRIM35-203ENST00000521253 COA7Q96BR5 231 aa24.5■■□□□ 1.51
TRIM35-203ENST00000521253 RABGAP1Q9Y3P9 1069 aa24.5■■□□□ 1.51
TRIM35-203ENST00000521253 ORC4O43929 436 aa24.49■■□□□ 1.51
TRIM35-203ENST00000521253 RAD21O60216 631 aa24.49■■□□□ 1.51
TRIM35-203ENST00000521253 FLT3LGP49771 235 aa24.49■■□□□ 1.51
TRIM35-203ENST00000521253 SH3TC2Q8TF17 1288 aa24.49■■□□□ 1.51
TRIM35-203ENST00000521253 NBPF3Q9H094 633 aa24.49■■□□□ 1.51
TRIM35-203ENST00000521253 TSPY2A6NKD2 308 aa24.48■■□□□ 1.51
TRIM35-203ENST00000521253 TTLL1O95922 423 aa24.48■■□□□ 1.51
TRIM35-203ENST00000521253 NEFLP07196 543 aa24.48■■□□□ 1.51
TRIM35-203ENST00000521253 CHMLP26374 656 aa24.48■■□□□ 1.51
TRIM35-203ENST00000521253 MKL1Q969V6 931 aa24.48■■□□□ 1.51
TRIM35-203ENST00000521253 ZNF333Q96JL9 665 aa24.48■■□□□ 1.51
TRIM35-203ENST00000521253 CCDC136Q96JN2 1154 aa24.48■■□□□ 1.51
TRIM35-203ENST00000521253 DSCC1Q9BVC3 393 aa24.48■■□□□ 1.51
TRIM35-203ENST00000521253 HOXC10Q9NYD6 342 aa24.48■■□□□ 1.51
TRIM35-203ENST00000521253 BTBD7Q9P203 1132 aa24.48■■□□□ 1.51
TRIM35-203ENST00000521253 F5H6K3 240 aa24.47■■□□□ 1.51
TRIM35-203ENST00000521253 RANBP6O60518 1105 aaKnown RBP24.47■■□□□ 1.51
TRIM35-203ENST00000521253 FLOT1O75955 427 aa24.47■■□□□ 1.51
TRIM35-203ENST00000521253 KLRC3Q07444 240 aa24.47■■□□□ 1.51
TRIM35-203ENST00000521253 NBPF11Q86T75 865 aa24.47■■□□□ 1.51
TRIM35-203ENST00000521253 PORCNQ9H237 461 aa24.47■■□□□ 1.51
TRIM35-203ENST00000521253 TOMM22Q9NS69 142 aa24.47■■□□□ 1.51
TRIM35-203ENST00000521253 MGAMO43451 1857 aa24.47■■□□□ 1.51
TRIM35-203ENST00000521253 RAD50Q92878 1312 aa24.46■■□□□ 1.51
TRIM35-203ENST00000521253 NDUFB10O96000 172 aa24.46■■□□□ 1.51
TRIM35-203ENST00000521253 DSG3P32926 999 aa24.46■■□□□ 1.51
TRIM35-203ENST00000521253 FAM83BQ5T0W9 1011 aa24.46■■□□□ 1.51
TRIM35-203ENST00000521253 TBC1D10CQ8IV04 446 aa24.46■■□□□ 1.51
TRIM35-203ENST00000521253 LRRC47Q8N1G4 583 aaKnown RBP24.46■■□□□ 1.51
TRIM35-203ENST00000521253 IL17RBQ9NRM6 502 aa24.46■■□□□ 1.51
TRIM35-203ENST00000521253 BRCA2P51587 3418 aa24.45■■□□□ 1.5
TRIM35-203ENST00000521253 NMT2O60551 498 aa24.45■■□□□ 1.5
TRIM35-203ENST00000521253 MAPK4P31152 587 aa24.45■■□□□ 1.5
TRIM35-203ENST00000521253 GRK4P32298 578 aa24.45■■□□□ 1.5
TRIM35-203ENST00000521253 RRP12Q5JTH9 1297 aaKnown RBP24.45■■□□□ 1.5
TRIM35-203ENST00000521253 AKNAD1Q5T1N1 836 aa24.45■■□□□ 1.5
TRIM35-203ENST00000521253 STAG1Q8WVM7 1258 aa24.45■■□□□ 1.5
TRIM35-203ENST00000521253 RUFY2Q8WXA3 655 aa24.45■■□□□ 1.5
TRIM35-203ENST00000521253 NUP88Q99567 741 aaPredicted RBP24.45■■□□□ 1.5
TRIM35-203ENST00000521253 FBXO28Q9NVF7 368 aa24.45■■□□□ 1.5
TRIM35-203ENST00000521253 GJD2Q9UKL4 321 aa24.45■■□□□ 1.5
TRIM35-203ENST00000521253 SYNPO2Q9UMS6 1093 aa24.45■■□□□ 1.5
TRIM35-203ENST00000521253 ZNF213O14771 459 aa24.44■■□□□ 1.5
TRIM35-203ENST00000521253 CCNA1P78396 465 aa24.44■■□□□ 1.5
TRIM35-203ENST00000521253 IRF5Q13568 498 aa24.44■■□□□ 1.5
TRIM35-203ENST00000521253 SAMD1Q6SPF0 538 aaPredicted RBP24.44■■□□□ 1.5
TRIM35-203ENST00000521253 MFSD6Q6ZSS7 791 aa24.44■■□□□ 1.5
TRIM35-203ENST00000521253 CCAR1Q8IX12 1150 aaKnown RBP24.44■■□□□ 1.5
TRIM35-203ENST00000521253 ATG4CQ96DT6 458 aa24.44■■□□□ 1.5
TRIM35-203ENST00000521253 ADCY3O60266 1144 aa24.43■■□□□ 1.5
TRIM35-203ENST00000521253 MYCP01106 439 aaPredicted RBP24.43■■□□□ 1.5
TRIM35-203ENST00000521253 PCP11498 1178 aaKnown RBP24.43■■□□□ 1.5
TRIM35-203ENST00000521253 RGS19P49795 217 aa24.43■■□□□ 1.5
TRIM35-203ENST00000521253 SLAIN1Q8ND83 568 aa24.43■■□□□ 1.5
TRIM35-203ENST00000521253 GMCL1P1Q8NEA9 526 aa24.43■■□□□ 1.5
TRIM35-203ENST00000521253 STX8Q9UNK0 236 aa24.43■■□□□ 1.5
TRIM35-203ENST00000521253 RLFQ13129 1914 aa24.42■■□□□ 1.5
TRIM35-203ENST00000521253 CENPBP07199 599 aaPredicted RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms