RNA–Protein interactions for RNA: ENST00000521122.1

PVT1-210, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 221 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-210ENST00000521122 KRT24Q2M2I5 525 aa11.17□□□□□ -0.62
PVT1-210ENST00000521122 SUGT1Q9Y2Z0 365 aa11.17□□□□□ -0.62
PVT1-210ENST00000521122 IVNS1ABPQ9Y6Y0 642 aa11.17□□□□□ -0.62
PVT1-210ENST00000521122 SLURP2P0DP57 97 aa11.16□□□□□ -0.62
PVT1-210ENST00000521122 CHAF1AQ13111 956 aaPredicted RBP11.16□□□□□ -0.62
PVT1-210ENST00000521122 PRAMEF19Q5SWL8 479 aa11.16□□□□□ -0.62
PVT1-210ENST00000521122 WDR78Q5VTH9 848 aa11.16□□□□□ -0.62
PVT1-210ENST00000521122 SPRED2Q7Z698 418 aa11.16□□□□□ -0.62
PVT1-210ENST00000521122 METTL22Q9BUU2 404 aaPredicted RBP11.16□□□□□ -0.62
PVT1-210ENST00000521122 SPEGQ15772 3267 aa11.15□□□□□ -0.62
PVT1-210ENST00000521122 MOXD2PA6NHM9 499 aa11.15□□□□□ -0.62
PVT1-210ENST00000521122 SOBPA7XYQ1 873 aa11.15□□□□□ -0.62
PVT1-210ENST00000521122 NEFMP07197 916 aa11.15□□□□□ -0.62
PVT1-210ENST00000521122 CSF1RP07333 972 aa11.15□□□□□ -0.62
PVT1-210ENST00000521122 HOXB7P09629 217 aa11.15□□□□□ -0.62
PVT1-210ENST00000521122 SIGLEC14Q08ET2 396 aa11.15□□□□□ -0.62
PVT1-210ENST00000521122 SH3BP5LQ7L8J4 393 aa11.15□□□□□ -0.62
PVT1-210ENST00000521122 FAM126BQ8IXS8 530 aa11.15□□□□□ -0.62
PVT1-210ENST00000521122 KIAA2013Q8IYS2 634 aa11.15□□□□□ -0.62
PVT1-210ENST00000521122 RPUSD2Q8IZ73 545 aaKnown RBP11.15□□□□□ -0.62
PVT1-210ENST00000521122 PLA2G12BQ9BX93 195 aa11.15□□□□□ -0.62
PVT1-210ENST00000521122 RABGAP1Q9Y3P9 1069 aa11.15□□□□□ -0.62
PVT1-210ENST00000521122 ELP1O95163 1332 aa11.14□□□□□ -0.63
PVT1-210ENST00000521122 ANKRD18BA2A2Z9 1011 aa11.14□□□□□ -0.63
PVT1-210ENST00000521122 TLR3O15455 904 aaKnown RBP11.14□□□□□ -0.63
PVT1-210ENST00000521122 ADAMTS4O75173 837 aa11.14□□□□□ -0.63
PVT1-210ENST00000521122 CNMDO75829 334 aa11.14□□□□□ -0.63
PVT1-210ENST00000521122 DPP9Q86TI2 863 aa11.14□□□□□ -0.63
PVT1-210ENST00000521122 VWCEQ96DN2 955 aa11.14□□□□□ -0.63
PVT1-210ENST00000521122 ASIC4Q96FT7 647 aa11.14□□□□□ -0.63
PVT1-210ENST00000521122 CHAMP1Q96JM3 812 aa11.14□□□□□ -0.63
PVT1-210ENST00000521122 SLC9A7Q96T83 725 aa11.14□□□□□ -0.63
PVT1-210ENST00000521122 OSBPL5Q9H0X9 879 aaPredicted RBP11.14□□□□□ -0.63
PVT1-210ENST00000521122 TMOD4Q9NZQ9 345 aa11.14□□□□□ -0.63
PVT1-210ENST00000521122 OTOGLQ3ZCN5 2332 aa11.14□□□□□ -0.63
PVT1-210ENST00000521122 ROBO3Q96MS0 1386 aa11.14□□□□□ -0.63
PVT1-210ENST00000521122 ZNF236Q9UL36 1845 aa11.14□□□□□ -0.63
PVT1-210ENST00000521122 UMODL1Q5DID0 1318 aa11.13□□□□□ -0.63
PVT1-210ENST00000521122 USP17L5A8MUK1 530 aa11.13□□□□□ -0.63
PVT1-210ENST00000521122 KIF28PB7ZC32 967 aa11.13□□□□□ -0.63
PVT1-210ENST00000521122 PLIN1O60240 522 aa11.13□□□□□ -0.63
PVT1-210ENST00000521122 ENTPD3O75355 529 aa11.13□□□□□ -0.63
PVT1-210ENST00000521122 BACE1P56817 501 aa11.13□□□□□ -0.63
PVT1-210ENST00000521122 MTMR2Q13614 643 aa11.13□□□□□ -0.63
PVT1-210ENST00000521122 UBE4AQ14139 1066 aa11.13□□□□□ -0.63
PVT1-210ENST00000521122 SMAD2Q15796 467 aaKnown RBP11.13□□□□□ -0.63
PVT1-210ENST00000521122 ZSCAN29Q8IWY8 852 aaPredicted RBP11.13□□□□□ -0.63
PVT1-210ENST00000521122 PHOSPHO2Q8TCD6 241 aa11.13□□□□□ -0.63
PVT1-210ENST00000521122 HIPK3Q9H422 1215 aa11.13□□□□□ -0.63
PVT1-210ENST00000521122 PHAXQ9H814 394 aaKnown RBP11.13□□□□□ -0.63
PVT1-210ENST00000521122 AS3MTQ9HBK9 375 aa11.13□□□□□ -0.63
PVT1-210ENST00000521122 NRBP1Q9UHY1 535 aa11.13□□□□□ -0.63
PVT1-210ENST00000521122 IQSEC3Q9UPP2 1182 aaPredicted RBP11.13□□□□□ -0.63
PVT1-210ENST00000521122 HELZ2Q9BYK8 2649 aaKnown RBP11.12□□□□□ -0.63
PVT1-210ENST00000521122 DDTLA6NHG4 134 aaPredicted RBP11.12□□□□□ -0.63
PVT1-210ENST00000521122 ARVCFO00192 962 aa11.12□□□□□ -0.63
PVT1-210ENST00000521122 PER1O15534 1290 aaPredicted RBP11.12□□□□□ -0.63
PVT1-210ENST00000521122 CD4P01730 458 aa11.12□□□□□ -0.63
PVT1-210ENST00000521122 IGKV5-2P06315 115 aa11.12□□□□□ -0.63
PVT1-210ENST00000521122 RGS3P49796 1198 aa11.12□□□□□ -0.63
PVT1-210ENST00000521122 CCL23P55773 120 aa11.12□□□□□ -0.63
PVT1-210ENST00000521122 TTLL4Q14679 1199 aa11.12□□□□□ -0.63
PVT1-210ENST00000521122 PABPC5Q96DU9 382 aaKnown RBP11.12□□□□□ -0.63
PVT1-210ENST00000521122 GLT1D1Q96MS3 346 aa11.12□□□□□ -0.63
PVT1-210ENST00000521122 SUGCTQ9HAC7 445 aa11.12□□□□□ -0.63
PVT1-210ENST00000521122 USP40Q9NVE5 1235 aa11.12□□□□□ -0.63
PVT1-210ENST00000521122 ATAD5Q96QE3 1844 aa11.12□□□□□ -0.63
PVT1-210ENST00000521122 A0A0U1RQG5 324 aaPredicted RBP11.11□□□□□ -0.63
PVT1-210ENST00000521122 H7C1W4 665 aa11.11□□□□□ -0.63
PVT1-210ENST00000521122 TBC1D12O60347 775 aa11.11□□□□□ -0.63
PVT1-210ENST00000521122 ADORA2AP29274 412 aa11.11□□□□□ -0.63
PVT1-210ENST00000521122 COL19A1Q14993 1142 aa11.11□□□□□ -0.63
PVT1-210ENST00000521122 KCNA10Q16322 511 aa11.11□□□□□ -0.63
PVT1-210ENST00000521122 NCBP3Q53F19 620 aaKnown RBP11.11□□□□□ -0.63
PVT1-210ENST00000521122 CCSAPQ6IQ19 270 aaPredicted RBP11.11□□□□□ -0.63
PVT1-210ENST00000521122 UBE3BQ7Z3V4 1068 aa11.11□□□□□ -0.63
PVT1-210ENST00000521122 HERC6Q8IVU3 1022 aa11.11□□□□□ -0.63
PVT1-210ENST00000521122 KLHDC9Q8NEP7 349 aa11.11□□□□□ -0.63
PVT1-210ENST00000521122 WDR18Q9BV38 432 aa11.11□□□□□ -0.63
PVT1-210ENST00000521122 IDI2Q9BXS1 227 aa11.11□□□□□ -0.63
PVT1-210ENST00000521122 CEP295Q9C0D2 2601 aa11.1□□□□□ -0.63
PVT1-210ENST00000521122 FRAT2O75474 233 aaPredicted RBP11.1□□□□□ -0.63
PVT1-210ENST00000521122 PFKMP08237 780 aa11.1□□□□□ -0.63
PVT1-210ENST00000521122 FBXO33Q7Z6M2 555 aa11.1□□□□□ -0.63
PVT1-210ENST00000521122 VPS37DQ86XT2 251 aa11.1□□□□□ -0.63
PVT1-210ENST00000521122 WNT8AQ9H1J5 351 aa11.1□□□□□ -0.63
PVT1-210ENST00000521122 FRYQ5TBA9 3013 aa11.1□□□□□ -0.63
PVT1-210ENST00000521122 RFX7Q2KHR2 1363 aa11.09□□□□□ -0.63
PVT1-210ENST00000521122 C19orf81C9J6K1 198 aa11.09□□□□□ -0.63
PVT1-210ENST00000521122 STRNO43815 780 aa11.09□□□□□ -0.63
PVT1-210ENST00000521122 CAP2P40123 477 aa11.09□□□□□ -0.63
PVT1-210ENST00000521122 RSPO4Q2I0M5 234 aaPredicted RBP11.09□□□□□ -0.63
PVT1-210ENST00000521122 KIAA0319Q5VV43 1072 aa11.09□□□□□ -0.63
PVT1-210ENST00000521122 PLEKHF1Q96S99 279 aa11.09□□□□□ -0.63
PVT1-210ENST00000521122 NOC4LQ9BVI4 516 aaKnown RBP11.09□□□□□ -0.63
PVT1-210ENST00000521122 SLC5A4Q9NY91 659 aa11.09□□□□□ -0.63
PVT1-210ENST00000521122 SYNRGQ9UMZ2 1314 aa11.09□□□□□ -0.63
PVT1-210ENST00000521122 SMG1Q96Q15 3661 aaKnown RBP11.08□□□□□ -0.63
PVT1-210ENST00000521122 A0A1B0GUL7 405 aa11.08□□□□□ -0.64
PVT1-210ENST00000521122 STXBP3O00186 592 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms