RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 KRT23Q9C075 422 aa14.61□□□□□ -0.07
CLK4-208ENST00000520957 ASCC2Q9H1I8 757 aaPredicted RBP14.61□□□□□ -0.07
CLK4-208ENST00000520957 VCPKMTQ9H867 229 aa14.61□□□□□ -0.07
CLK4-208ENST00000520957 GPHNQ9NQX3 736 aaPredicted RBP14.61□□□□□ -0.07
CLK4-208ENST00000520957 TCP11L1Q9NUJ3 509 aa14.61□□□□□ -0.07
CLK4-208ENST00000520957 MTMR7Q9Y216 660 aa14.61□□□□□ -0.07
CLK4-208ENST00000520957 PLIN4Q96Q06 1357 aa14.6□□□□□ -0.07
CLK4-208ENST00000520957 ECM2O94769 699 aaPredicted RBP14.6□□□□□ -0.07
CLK4-208ENST00000520957 ALDH1A1P00352 501 aa14.6□□□□□ -0.07
CLK4-208ENST00000520957 HSPA8P11142 646 aaKnown RBP14.6□□□□□ -0.07
CLK4-208ENST00000520957 HSPA4P34932 840 aa14.6□□□□□ -0.07
CLK4-208ENST00000520957 USP14P54578 494 aa14.6□□□□□ -0.07
CLK4-208ENST00000520957 ANTXR2P58335 489 aa14.6□□□□□ -0.07
CLK4-208ENST00000520957 ZSCAN10Q96SZ4 725 aaPredicted RBP14.6□□□□□ -0.07
CLK4-208ENST00000520957 TMEM47Q9BQJ4 181 aa14.6□□□□□ -0.07
CLK4-208ENST00000520957 RPAP3Q9H6T3 665 aaPredicted RBP14.6□□□□□ -0.07
CLK4-208ENST00000520957 CNNM2Q9H8M5 875 aa14.6□□□□□ -0.07
CLK4-208ENST00000520957 SENP2Q9HC62 589 aa14.6□□□□□ -0.07
CLK4-208ENST00000520957 LAMB1P07942 1786 aa14.59□□□□□ -0.07
CLK4-208ENST00000520957 NDUFB10O96000 172 aa14.59□□□□□ -0.07
CLK4-208ENST00000520957 HOXA7P31268 230 aaPredicted RBP14.59□□□□□ -0.07
CLK4-208ENST00000520957 TRDNQ13061 729 aa14.59□□□□□ -0.07
CLK4-208ENST00000520957 MB21D2Q8IYB1 491 aaPredicted RBP14.59□□□□□ -0.07
CLK4-208ENST00000520957 ENAHQ8N8S7 591 aaPredicted RBP14.59□□□□□ -0.07
CLK4-208ENST00000520957 NCOA7Q8NI08 942 aa14.59□□□□□ -0.07
CLK4-208ENST00000520957 SAGE1Q9NXZ1 904 aa14.59□□□□□ -0.07
CLK4-208ENST00000520957 CPA4Q9UI42 421 aa14.59□□□□□ -0.07
CLK4-208ENST00000520957 ATAD5Q96QE3 1844 aa14.59□□□□□ -0.07
CLK4-208ENST00000520957 TLR2O60603 784 aa14.58□□□□□ -0.07
CLK4-208ENST00000520957 CPA1P15085 419 aa14.58□□□□□ -0.07
CLK4-208ENST00000520957 MCCP23508 829 aa14.58□□□□□ -0.07
CLK4-208ENST00000520957 CAP1Q01518 475 aa14.58□□□□□ -0.07
CLK4-208ENST00000520957 FAM83BQ5T0W9 1011 aa14.58□□□□□ -0.07
CLK4-208ENST00000520957 CATSPERGQ6ZRH7 1159 aa14.58□□□□□ -0.07
CLK4-208ENST00000520957 KCNB2Q92953 911 aa14.58□□□□□ -0.07
CLK4-208ENST00000520957 ZFYVE28Q9HCC9 887 aa14.58□□□□□ -0.07
CLK4-208ENST00000520957 FBXO28Q9NVF7 368 aa14.58□□□□□ -0.07
CLK4-208ENST00000520957 SNX14Q9Y5W7 946 aa14.58□□□□□ -0.07
CLK4-208ENST00000520957 GPR25O00155 361 aa14.58□□□□□ -0.08
CLK4-208ENST00000520957 SLFN13Q68D06 897 aa14.58□□□□□ -0.08
CLK4-208ENST00000520957 SAMD1Q6SPF0 538 aaPredicted RBP14.58□□□□□ -0.08
CLK4-208ENST00000520957 RALYLQ86SE5 291 aaKnown RBP14.58□□□□□ -0.08
CLK4-208ENST00000520957 TCEANC2Q96MN5 208 aa14.58□□□□□ -0.08
CLK4-208ENST00000520957 CFHR5Q9BXR6 569 aa14.58□□□□□ -0.08
CLK4-208ENST00000520957 LRRC2Q9BYS8 371 aa14.58□□□□□ -0.08
CLK4-208ENST00000520957 SH2D4AQ9H788 454 aa14.58□□□□□ -0.08
CLK4-208ENST00000520957 SLC45A1Q9Y2W3 748 aa14.58□□□□□ -0.08
CLK4-208ENST00000520957 TNKSO95271 1327 aa14.58□□□□□ -0.08
CLK4-208ENST00000520957 USP17L15C9J2P7 530 aa14.57□□□□□ -0.08
CLK4-208ENST00000520957 USP17L13C9JLJ4 530 aa14.57□□□□□ -0.08
CLK4-208ENST00000520957 USP17L11C9JVI0 530 aa14.57□□□□□ -0.08
CLK4-208ENST00000520957 USP17L18D6R9N7 530 aa14.57□□□□□ -0.08
CLK4-208ENST00000520957 USP17L22D6RA61 530 aa14.57□□□□□ -0.08
CLK4-208ENST00000520957 USP17L17D6RBQ6 530 aa14.57□□□□□ -0.08
CLK4-208ENST00000520957 USP17L19D6RCP7 530 aa14.57□□□□□ -0.08
CLK4-208ENST00000520957 USP17L20D6RJB6 530 aa14.57□□□□□ -0.08
CLK4-208ENST00000520957 CTCFP49711 727 aaPredicted RBP14.57□□□□□ -0.08
CLK4-208ENST00000520957 USP17L24Q0WX57 530 aa14.57□□□□□ -0.08
CLK4-208ENST00000520957 SEC23AQ15436 765 aa14.57□□□□□ -0.08
CLK4-208ENST00000520957 TSGA10IPQ3SY00 556 aa14.57□□□□□ -0.08
CLK4-208ENST00000520957 RNF20Q5VTR2 975 aa14.57□□□□□ -0.08
CLK4-208ENST00000520957 C17orf99Q6UX52 265 aa14.57□□□□□ -0.08
CLK4-208ENST00000520957 IQCA1Q86XH1 822 aa14.57□□□□□ -0.08
CLK4-208ENST00000520957 POTEDQ86YR6 584 aa14.57□□□□□ -0.08
CLK4-208ENST00000520957 IGDCC4Q8TDY8 1250 aa14.57□□□□□ -0.08
CLK4-208ENST00000520957 ZNF296Q8WUU4 475 aaPredicted RBP14.57□□□□□ -0.08
CLK4-208ENST00000520957 LPAR1Q92633 364 aa14.57□□□□□ -0.08
CLK4-208ENST00000520957 TTC14Q96N46 770 aa14.57□□□□□ -0.08
CLK4-208ENST00000520957 TANGO6Q9C0B7 1094 aa14.57□□□□□ -0.08
CLK4-208ENST00000520957 GOPCQ9HD26 462 aa14.57□□□□□ -0.08
CLK4-208ENST00000520957 TXNRD2Q9NNW7 524 aa14.57□□□□□ -0.08
CLK4-208ENST00000520957 ZCCHC17Q9NP64 241 aaKnown RBP14.57□□□□□ -0.08
CLK4-208ENST00000520957 TOP1P11387 765 aaKnown RBP14.56□□□□□ -0.08
CLK4-208ENST00000520957 ZKSCAN1P17029 563 aaPredicted RBP14.56□□□□□ -0.08
CLK4-208ENST00000520957 OSBPP22059 807 aa14.56□□□□□ -0.08
CLK4-208ENST00000520957 HERVK_113P62684 666 aa14.56□□□□□ -0.08
CLK4-208ENST00000520957 IRX3P78415 501 aaPredicted RBP14.56□□□□□ -0.08
CLK4-208ENST00000520957 DGKHQ86XP1 1220 aa14.56□□□□□ -0.08
CLK4-208ENST00000520957 GMCL1P1Q8NEA9 526 aa14.56□□□□□ -0.08
CLK4-208ENST00000520957 SMCR8Q8TEV9 937 aaPredicted RBP14.56□□□□□ -0.08
CLK4-208ENST00000520957 NEK1Q96PY6 1258 aa14.56□□□□□ -0.08
CLK4-208ENST00000520957 PARK7Q99497 189 aaKnown RBP14.56□□□□□ -0.08
CLK4-208ENST00000520957 UBAC1Q9BSL1 405 aa14.56□□□□□ -0.08
CLK4-208ENST00000520957 ADGRA2Q96PE1 1338 aa14.56□□□□□ -0.08
CLK4-208ENST00000520957 GREB1LQ9C091 1923 aaPredicted RBP14.56□□□□□ -0.08
CLK4-208ENST00000520957 IFIT3O14879 490 aaKnown RBP14.55□□□□□ -0.08
CLK4-208ENST00000520957 PRC1O43663 620 aa14.55□□□□□ -0.08
CLK4-208ENST00000520957 Q3C1V9 767 aa14.55□□□□□ -0.08
CLK4-208ENST00000520957 KCTD1Q719H9 257 aa14.55□□□□□ -0.08
CLK4-208ENST00000520957 ANKRD13CQ8N6S4 541 aa14.55□□□□□ -0.08
CLK4-208ENST00000520957 ANKS1AQ92625 1134 aa14.55□□□□□ -0.08
CLK4-208ENST00000520957 RBPJLQ9UBG7 517 aa14.55□□□□□ -0.08
CLK4-208ENST00000520957 SPDYE16A6NNV3 312 aaPredicted RBP14.55□□□□□ -0.08
CLK4-208ENST00000520957 WDR46O15213 610 aaKnown RBP14.55□□□□□ -0.08
CLK4-208ENST00000520957 FLOT1O75955 427 aa14.55□□□□□ -0.08
CLK4-208ENST00000520957 BCRP11274 1271 aa14.55□□□□□ -0.08
CLK4-208ENST00000520957 CTGFP29279 349 aa14.55□□□□□ -0.08
CLK4-208ENST00000520957 EXOSC10Q01780 885 aaKnown RBP14.55□□□□□ -0.08
CLK4-208ENST00000520957 PABPC4Q13310 644 aaKnown RBP eCLIP14.55□□□□□ -0.08
CLK4-208ENST00000520957 COG2Q14746 738 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms