RNA–Protein interactions for RNA: ENST00000520608.2

ZNF260-201, Transcript of zinc finger protein 260, humanhuman

TSL 3

Gene ZNF260, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-201ENST00000520608 BCL11AQ9H165 835 aa10.35□□□□□ -0.75
ZNF260-201ENST00000520608 ANTXR1Q9H6X2 564 aa10.35□□□□□ -0.75
ZNF260-201ENST00000520608 SOX1O00570 391 aaPredicted RBP10.34□□□□□ -0.75
ZNF260-201ENST00000520608 XRCC5P13010 732 aaKnown RBP10.34□□□□□ -0.75
ZNF260-201ENST00000520608 USP14P54578 494 aa10.34□□□□□ -0.75
ZNF260-201ENST00000520608 CCNA1P78396 465 aa10.34□□□□□ -0.75
ZNF260-201ENST00000520608 CACNB2Q08289 660 aaPredicted RBP10.34□□□□□ -0.75
ZNF260-201ENST00000520608 CCL14Q16627 93 aa10.34□□□□□ -0.75
ZNF260-201ENST00000520608 ABCB5Q2M3G0 1257 aa10.34□□□□□ -0.75
ZNF260-201ENST00000520608 MAP3K21Q5TCX8 1036 aa10.34□□□□□ -0.75
ZNF260-201ENST00000520608 TATDN1Q6P1N9 297 aa10.34□□□□□ -0.75
ZNF260-201ENST00000520608 CEP85Q6P2H3 762 aa10.34□□□□□ -0.75
ZNF260-201ENST00000520608 TMEM92Q6UXU6 159 aa10.34□□□□□ -0.75
ZNF260-201ENST00000520608 TTC6Q86TZ1 520 aa10.34□□□□□ -0.75
ZNF260-201ENST00000520608 ERC1Q8IUD2 1116 aa10.34□□□□□ -0.75
ZNF260-201ENST00000520608 LRCH3Q96II8 777 aa10.34□□□□□ -0.75
ZNF260-201ENST00000520608 EHD4Q9H223 541 aa10.34□□□□□ -0.75
ZNF260-201ENST00000520608 CABP5Q9NP86 173 aa10.34□□□□□ -0.75
ZNF260-201ENST00000520608 OGDHLQ9ULD0 1010 aa10.34□□□□□ -0.75
ZNF260-201ENST00000520608 MYH1P12882 1939 aa10.34□□□□□ -0.75
ZNF260-201ENST00000520608 MAGEB6P1A0A0J9YX57 407 aa10.33□□□□□ -0.76
ZNF260-201ENST00000520608 USP17L15C9J2P7 530 aa10.33□□□□□ -0.76
ZNF260-201ENST00000520608 USP17L13C9JLJ4 530 aa10.33□□□□□ -0.76
ZNF260-201ENST00000520608 USP17L11C9JVI0 530 aa10.33□□□□□ -0.76
ZNF260-201ENST00000520608 USP17L18D6R9N7 530 aa10.33□□□□□ -0.76
ZNF260-201ENST00000520608 USP17L22D6RA61 530 aa10.33□□□□□ -0.76
ZNF260-201ENST00000520608 USP17L17D6RBQ6 530 aa10.33□□□□□ -0.76
ZNF260-201ENST00000520608 USP17L19D6RCP7 530 aa10.33□□□□□ -0.76
ZNF260-201ENST00000520608 USP17L20D6RJB6 530 aa10.33□□□□□ -0.76
ZNF260-201ENST00000520608 APBB1O00213 710 aa10.33□□□□□ -0.76
ZNF260-201ENST00000520608 GLRX3O76003 335 aaKnown RBP10.33□□□□□ -0.76
ZNF260-201ENST00000520608 POLR3DP05423 398 aaPredicted RBP10.33□□□□□ -0.76
ZNF260-201ENST00000520608 VCAM1P19320 739 aa10.33□□□□□ -0.76
ZNF260-201ENST00000520608 CCND3P30281 292 aaPredicted RBP10.33□□□□□ -0.76
ZNF260-201ENST00000520608 USP17L24Q0WX57 530 aa10.33□□□□□ -0.76
ZNF260-201ENST00000520608 MORN1Q5T089 497 aa10.33□□□□□ -0.76
ZNF260-201ENST00000520608 FBXO22Q8NEZ5 403 aa10.33□□□□□ -0.76
ZNF260-201ENST00000520608 C12orf42Q96LP6 360 aa10.33□□□□□ -0.76
ZNF260-201ENST00000520608 IL1RAPL2Q9NP60 686 aa10.33□□□□□ -0.76
ZNF260-201ENST00000520608 RABGAP1Q9Y3P9 1069 aa10.33□□□□□ -0.76
ZNF260-201ENST00000520608 PFASO15067 1338 aa10.33□□□□□ -0.76
ZNF260-201ENST00000520608 MPHOSPH10O00566 681 aaKnown RBP10.32□□□□□ -0.76
ZNF260-201ENST00000520608 CNMDO75829 334 aa10.32□□□□□ -0.76
ZNF260-201ENST00000520608 MAGEA10P43363 369 aaPredicted RBP10.32□□□□□ -0.76
ZNF260-201ENST00000520608 PLCD1P51178 756 aa10.32□□□□□ -0.76
ZNF260-201ENST00000520608 MAP2K5Q13163 448 aa10.32□□□□□ -0.76
ZNF260-201ENST00000520608 TTF1Q15361 905 aaPredicted RBP10.32□□□□□ -0.76
ZNF260-201ENST00000520608 SLC9C2Q5TAH2 1124 aa10.32□□□□□ -0.76
ZNF260-201ENST00000520608 GPR153Q6NV75 609 aa10.32□□□□□ -0.76
ZNF260-201ENST00000520608 POTEEQ6S8J3 1075 aa10.32□□□□□ -0.76
ZNF260-201ENST00000520608 CATSPERGQ6ZRH7 1159 aa10.32□□□□□ -0.76
ZNF260-201ENST00000520608 ACER1Q8TDN7 264 aa10.32□□□□□ -0.76
ZNF260-201ENST00000520608 PANK1Q8TE04 598 aa10.32□□□□□ -0.76
ZNF260-201ENST00000520608 USP6NLQ92738 828 aa10.32□□□□□ -0.76
ZNF260-201ENST00000520608 DNAJC2Q99543 621 aaKnown RBP10.32□□□□□ -0.76
ZNF260-201ENST00000520608 GDF15Q99988 308 aa10.32□□□□□ -0.76
ZNF260-201ENST00000520608 KIAA1683Q9H0B3 1180 aa10.32□□□□□ -0.76
ZNF260-201ENST00000520608 RPAP3Q9H6T3 665 aaPredicted RBP10.32□□□□□ -0.76
ZNF260-201ENST00000520608 IVNS1ABPQ9Y6Y0 642 aa10.32□□□□□ -0.76
ZNF260-201ENST00000520608 NAV1Q8NEY1 1877 aa10.32□□□□□ -0.76
ZNF260-201ENST00000520608 LAMA3Q16787 3333 aa10.31□□□□□ -0.76
ZNF260-201ENST00000520608 PDE6AP16499 860 aa10.31□□□□□ -0.76
ZNF260-201ENST00000520608 CNGA1P29973 690 aa10.31□□□□□ -0.76
ZNF260-201ENST00000520608 BMP8BP34820 402 aa10.31□□□□□ -0.76
ZNF260-201ENST00000520608 SHMT1P34896 483 aa10.31□□□□□ -0.76
ZNF260-201ENST00000520608 HSP90AB4PQ58FF6 505 aa10.31□□□□□ -0.76
ZNF260-201ENST00000520608 MFSD14CQ5VZR4 134 aa10.31□□□□□ -0.76
ZNF260-201ENST00000520608 TMED8Q6PL24 325 aaPredicted RBP10.31□□□□□ -0.76
ZNF260-201ENST00000520608 RHPN1Q8TCX5 695 aa10.31□□□□□ -0.76
ZNF260-201ENST00000520608 EDC3Q96F86 508 aaKnown RBP10.31□□□□□ -0.76
ZNF260-201ENST00000520608 RIOK1Q9BRS2 568 aaKnown RBP10.31□□□□□ -0.76
ZNF260-201ENST00000520608 CRNKL1Q9BZJ0 848 aaKnown RBP10.31□□□□□ -0.76
ZNF260-201ENST00000520608 TANGO6Q9C0B7 1094 aa10.31□□□□□ -0.76
ZNF260-201ENST00000520608 UBE2OQ9C0C9 1292 aaKnown RBP10.31□□□□□ -0.76
ZNF260-201ENST00000520608 MCM9Q9NXL9 1143 aa10.31□□□□□ -0.76
ZNF260-201ENST00000520608 SLC15A5A6NIM6 579 aa10.3□□□□□ -0.76
ZNF260-201ENST00000520608 SPDYE16A6NNV3 312 aaPredicted RBP10.3□□□□□ -0.76
ZNF260-201ENST00000520608 GOLIM4O00461 696 aa10.3□□□□□ -0.76
ZNF260-201ENST00000520608 IFIT2P09913 472 aaKnown RBP10.3□□□□□ -0.76
ZNF260-201ENST00000520608 ATP2B2Q01814 1243 aa10.3□□□□□ -0.76
ZNF260-201ENST00000520608 SEPT2Q15019 361 aa10.3□□□□□ -0.76
ZNF260-201ENST00000520608 LRRC26Q2I0M4 334 aa10.3□□□□□ -0.76
ZNF260-201ENST00000520608 TDHQ8IZJ6 230 aa10.3□□□□□ -0.76
ZNF260-201ENST00000520608 CLASRPQ8N2M8 674 aaKnown RBP10.3□□□□□ -0.76
ZNF260-201ENST00000520608 SLC17A8Q8NDX2 589 aa10.3□□□□□ -0.76
ZNF260-201ENST00000520608 SDR42E1Q8WUS8 393 aa10.3□□□□□ -0.76
ZNF260-201ENST00000520608 FLRT1Q9NZU1 646 aa10.3□□□□□ -0.76
ZNF260-201ENST00000520608 BTBD7Q9P203 1132 aa10.3□□□□□ -0.76
ZNF260-201ENST00000520608 ZNF532Q9HCE3 1301 aa10.3□□□□□ -0.76
ZNF260-201ENST00000520608 COL6A1P12109 1028 aa10.29□□□□□ -0.76
ZNF260-201ENST00000520608 PTPREP23469 700 aa10.29□□□□□ -0.76
ZNF260-201ENST00000520608 CYP2C19P33261 490 aa10.29□□□□□ -0.76
ZNF260-201ENST00000520608 GUCY1A2P33402 732 aa10.29□□□□□ -0.76
ZNF260-201ENST00000520608 GRB14Q14449 540 aa10.29□□□□□ -0.76
ZNF260-201ENST00000520608 LBX2Q6XYB7 198 aa10.29□□□□□ -0.76
ZNF260-201ENST00000520608 LCORLQ8N3X6 602 aa10.29□□□□□ -0.76
ZNF260-201ENST00000520608 DEFB123Q8N688 67 aa10.29□□□□□ -0.76
ZNF260-201ENST00000520608 SENP6Q9GZR1 1112 aaPredicted RBP10.29□□□□□ -0.76
ZNF260-201ENST00000520608 A0A1W2PRG0 241 aa10.28□□□□□ -0.76
ZNF260-201ENST00000520608 HMMRO75330 724 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms