RNA–Protein interactions for RNA: ENST00000520126.1

CLK4-204, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 1,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-204ENST00000520126 ESR2Q92731 530 aa20.32■□□□□ 0.84
CLK4-204ENST00000520126 MTMR4Q9NYA4 1195 aa20.32■□□□□ 0.84
CLK4-204ENST00000520126 NYAP2Q9P242 653 aa20.32■□□□□ 0.84
CLK4-204ENST00000520126 SLC45A1Q9Y2W3 748 aa20.32■□□□□ 0.84
CLK4-204ENST00000520126 RBM8AQ9Y5S9 174 aaKnown RBP20.32■□□□□ 0.84
CLK4-204ENST00000520126 NEDD4P46934 1319 aa20.32■□□□□ 0.84
CLK4-204ENST00000520126 CASP8AP2Q9UKL3 1982 aa20.31■□□□□ 0.84
CLK4-204ENST00000520126 B4E1Z4 1266 aa20.31■□□□□ 0.84
CLK4-204ENST00000520126 USP17L15C9J2P7 530 aa20.31■□□□□ 0.84
CLK4-204ENST00000520126 USP17L13C9JLJ4 530 aa20.31■□□□□ 0.84
CLK4-204ENST00000520126 USP17L11C9JVI0 530 aa20.31■□□□□ 0.84
CLK4-204ENST00000520126 USP17L18D6R9N7 530 aa20.31■□□□□ 0.84
CLK4-204ENST00000520126 USP17L22D6RA61 530 aa20.31■□□□□ 0.84
CLK4-204ENST00000520126 USP17L17D6RBQ6 530 aa20.31■□□□□ 0.84
CLK4-204ENST00000520126 USP17L19D6RCP7 530 aa20.31■□□□□ 0.84
CLK4-204ENST00000520126 USP17L20D6RJB6 530 aa20.31■□□□□ 0.84
CLK4-204ENST00000520126 USP17L24Q0WX57 530 aa20.31■□□□□ 0.84
CLK4-204ENST00000520126 ANKRD13CQ8N6S4 541 aa20.31■□□□□ 0.84
CLK4-204ENST00000520126 P2RX7Q99572 595 aaKnown RBP20.31■□□□□ 0.84
CLK4-204ENST00000520126 ZKSCAN3Q9BRR0 538 aa20.31■□□□□ 0.84
CLK4-204ENST00000520126 VCPKMTQ9H867 229 aa20.31■□□□□ 0.84
CLK4-204ENST00000520126 PTPRFP10586 1907 aa20.31■□□□□ 0.84
CLK4-204ENST00000520126 KDM4AO75164 1064 aa20.3■□□□□ 0.84
CLK4-204ENST00000520126 CAPN15O75808 1086 aa20.3■□□□□ 0.84
CLK4-204ENST00000520126 TRDNQ13061 729 aa20.3■□□□□ 0.84
CLK4-204ENST00000520126 KIF22Q14807 665 aa20.3■□□□□ 0.84
CLK4-204ENST00000520126 KIAA1755Q5JYT7 1200 aa20.3■□□□□ 0.84
CLK4-204ENST00000520126 MAP4K1Q92918 833 aa20.3■□□□□ 0.84
CLK4-204ENST00000520126 C12orf42Q96LP6 360 aa20.3■□□□□ 0.84
CLK4-204ENST00000520126 LSG1Q9H089 658 aaKnown RBP20.3■□□□□ 0.84
CLK4-204ENST00000520126 IGKV6D-41A0A0C4DH26 115 aa20.29■□□□□ 0.84
CLK4-204ENST00000520126 CYP21A2P08686 494 aa20.29■□□□□ 0.84
CLK4-204ENST00000520126 PCP11498 1178 aaKnown RBP20.29■□□□□ 0.84
CLK4-204ENST00000520126 C17orf99Q6UX52 265 aa20.29■□□□□ 0.84
CLK4-204ENST00000520126 ERO1AQ96HE7 468 aa20.29■□□□□ 0.84
CLK4-204ENST00000520126 PAGR1Q9BTK6 254 aa20.29■□□□□ 0.84
CLK4-204ENST00000520126 KRT23Q9C075 422 aa20.29■□□□□ 0.84
CLK4-204ENST00000520126 FGRP09769 529 aa20.28■□□□□ 0.84
CLK4-204ENST00000520126 HOXA7P31268 230 aaPredicted RBP20.28■□□□□ 0.84
CLK4-204ENST00000520126 PPP4R3BQ5MIZ7 849 aa20.28■□□□□ 0.84
CLK4-204ENST00000520126 CATSPERGQ6ZRH7 1159 aa20.28■□□□□ 0.84
CLK4-204ENST00000520126 LPAR1Q92633 364 aa20.28■□□□□ 0.84
CLK4-204ENST00000520126 NUP88Q99567 741 aaPredicted RBP20.28■□□□□ 0.84
CLK4-204ENST00000520126 IL17RBQ9NRM6 502 aa20.28■□□□□ 0.84
CLK4-204ENST00000520126 F5H6K3 240 aa20.27■□□□□ 0.84
CLK4-204ENST00000520126 PEX10O60683 326 aa20.27■□□□□ 0.84
CLK4-204ENST00000520126 FLOT1O75955 427 aa20.27■□□□□ 0.84
CLK4-204ENST00000520126 FMNL1O95466 1100 aaPredicted RBP20.27■□□□□ 0.84
CLK4-204ENST00000520126 HERVK_113P62684 666 aa20.27■□□□□ 0.84
CLK4-204ENST00000520126 KLRC3Q07444 240 aa20.27■□□□□ 0.84
CLK4-204ENST00000520126 FAM83BQ5T0W9 1011 aa20.27■□□□□ 0.84
CLK4-204ENST00000520126 RALYLQ86SE5 291 aaKnown RBP20.27■□□□□ 0.84
CLK4-204ENST00000520126 IQCA1Q86XH1 822 aa20.27■□□□□ 0.84
CLK4-204ENST00000520126 CNNM2Q9H8M5 875 aa20.27■□□□□ 0.84
CLK4-204ENST00000520126 TRIM17Q9Y577 477 aa20.27■□□□□ 0.84
CLK4-204ENST00000520126 LOC285556D6RIA3 1793 aa20.27■□□□□ 0.84
CLK4-204ENST00000520126 WDR46O15213 610 aaKnown RBP20.27■□□□□ 0.83
CLK4-204ENST00000520126 NDUFB10O96000 172 aa20.27■□□□□ 0.83
CLK4-204ENST00000520126 GCLCP48506 637 aaPredicted RBP20.27■□□□□ 0.83
CLK4-204ENST00000520126 NOM1Q5C9Z4 860 aaKnown RBP20.27■□□□□ 0.83
CLK4-204ENST00000520126 SLFN13Q68D06 897 aa20.27■□□□□ 0.83
CLK4-204ENST00000520126 CCAR1Q8IX12 1150 aaKnown RBP20.27■□□□□ 0.83
CLK4-204ENST00000520126 NKX2-3Q8TAU0 364 aa20.27■□□□□ 0.83
CLK4-204ENST00000520126 PLIN4Q96Q06 1357 aa20.26■□□□□ 0.83
CLK4-204ENST00000520126 E7EWF7 191 aa20.26■□□□□ 0.83
CLK4-204ENST00000520126 IKQ13123 557 aaPredicted RBP20.26■□□□□ 0.83
CLK4-204ENST00000520126 ARHGEF6Q15052 776 aa20.26■□□□□ 0.83
CLK4-204ENST00000520126 CTU1Q7Z7A3 348 aaKnown RBP20.26■□□□□ 0.83
CLK4-204ENST00000520126 TNS4Q8IZW8 715 aa20.26■□□□□ 0.83
CLK4-204ENST00000520126 MKL1Q969V6 931 aa20.26■□□□□ 0.83
CLK4-204ENST00000520126 UBAC1Q9BSL1 405 aa20.26■□□□□ 0.83
CLK4-204ENST00000520126 ARHGAP39Q9C0H5 1083 aa20.26■□□□□ 0.83
CLK4-204ENST00000520126 EFCC1Q9HA90 598 aa20.26■□□□□ 0.83
CLK4-204ENST00000520126 CWC22Q9HCG8 908 aaKnown RBP20.26■□□□□ 0.83
CLK4-204ENST00000520126 ZSWIM5Q9P217 1185 aa20.26■□□□□ 0.83
CLK4-204ENST00000520126 TAF6LQ9Y6J9 622 aa20.26■□□□□ 0.83
CLK4-204ENST00000520126 ADGRA2Q96PE1 1338 aa20.25■□□□□ 0.83
CLK4-204ENST00000520126 SLC27A2O14975 620 aa20.25■□□□□ 0.83
CLK4-204ENST00000520126 PSMC4P43686 418 aa20.25■□□□□ 0.83
CLK4-204ENST00000520126 LACTBP83111 547 aaPredicted RBP20.25■□□□□ 0.83
CLK4-204ENST00000520126 COG2Q14746 738 aa20.25■□□□□ 0.83
CLK4-204ENST00000520126 CREB3L3Q68CJ9 461 aa20.25■□□□□ 0.83
CLK4-204ENST00000520126 BCRP11274 1271 aa20.24■□□□□ 0.83
CLK4-204ENST00000520126 MCCP23508 829 aa20.24■□□□□ 0.83
CLK4-204ENST00000520126 PLS1Q14651 629 aa20.24■□□□□ 0.83
CLK4-204ENST00000520126 CCDC96Q2M329 555 aa20.24■□□□□ 0.83
CLK4-204ENST00000520126 RNF20Q5VTR2 975 aa20.24■□□□□ 0.83
CLK4-204ENST00000520126 CHST3Q7LGC8 479 aa20.24■□□□□ 0.83
CLK4-204ENST00000520126 NCOA7Q8NI08 942 aa20.24■□□□□ 0.83
CLK4-204ENST00000520126 TMEM47Q9BQJ4 181 aa20.24■□□□□ 0.83
CLK4-204ENST00000520126 FBXO28Q9NVF7 368 aa20.24■□□□□ 0.83
CLK4-204ENST00000520126 HOXC10Q9NYD6 342 aa20.24■□□□□ 0.83
CLK4-204ENST00000520126 CTDP1Q9Y5B0 961 aaPredicted RBP20.24■□□□□ 0.83
CLK4-204ENST00000520126 LAMA4Q16363 1823 aa20.23■□□□□ 0.83
CLK4-204ENST00000520126 REC8O95072 547 aa20.23■□□□□ 0.83
CLK4-204ENST00000520126 TOP1P11387 765 aaKnown RBP20.23■□□□□ 0.83
CLK4-204ENST00000520126 SLC1A4P43007 532 aa20.23■□□□□ 0.83
CLK4-204ENST00000520126 WDR78Q5VTH9 848 aa20.23■□□□□ 0.83
CLK4-204ENST00000520126 GPRC5AQ8NFJ5 357 aa20.23■□□□□ 0.83
CLK4-204ENST00000520126 ZSCAN10Q96SZ4 725 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms