RNA–Protein interactions for RNA: ENST00000520119.1

IGHV1-17-201, Transcript of immunoglobulin heavy variable 1-17 (pseudogene), humanhuman

BASIC

Gene IGHV1-17, Length 334 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV1-17-201ENST00000520119 USP17L13C9JLJ4 530 aa13.35□□□□□ -0.27
IGHV1-17-201ENST00000520119 USP17L11C9JVI0 530 aa13.35□□□□□ -0.27
IGHV1-17-201ENST00000520119 USP17L18D6R9N7 530 aa13.35□□□□□ -0.27
IGHV1-17-201ENST00000520119 USP17L22D6RA61 530 aa13.35□□□□□ -0.27
IGHV1-17-201ENST00000520119 USP17L17D6RBQ6 530 aa13.35□□□□□ -0.27
IGHV1-17-201ENST00000520119 USP17L19D6RCP7 530 aa13.35□□□□□ -0.27
IGHV1-17-201ENST00000520119 USP17L20D6RJB6 530 aa13.35□□□□□ -0.27
IGHV1-17-201ENST00000520119 GOLIM4O00461 696 aa13.35□□□□□ -0.27
IGHV1-17-201ENST00000520119 XRCC5P13010 732 aaKnown RBP13.35□□□□□ -0.27
IGHV1-17-201ENST00000520119 SHMT1P34896 483 aa13.35□□□□□ -0.27
IGHV1-17-201ENST00000520119 ERVK-9P63128 1117 aa13.35□□□□□ -0.27
IGHV1-17-201ENST00000520119 ERVK-24P63145 666 aa13.35□□□□□ -0.27
IGHV1-17-201ENST00000520119 FOXK1P85037 733 aa13.35□□□□□ -0.27
IGHV1-17-201ENST00000520119 USP17L24Q0WX57 530 aa13.35□□□□□ -0.27
IGHV1-17-201ENST00000520119 PDE3AQ14432 1141 aa13.35□□□□□ -0.27
IGHV1-17-201ENST00000520119 TRMT44Q8IYL2 757 aaKnown RBP13.35□□□□□ -0.27
IGHV1-17-201ENST00000520119 KIAA1683Q9H0B3 1180 aa13.35□□□□□ -0.27
IGHV1-17-201ENST00000520119 HMX1Q9NP08 348 aaPredicted RBP13.35□□□□□ -0.27
IGHV1-17-201ENST00000520119 RCAN3Q9UKA8 241 aa13.35□□□□□ -0.27
IGHV1-17-201ENST00000520119 ZNF532Q9HCE3 1301 aa13.35□□□□□ -0.27
IGHV1-17-201ENST00000520119 TCRBV5S4A2TA0A5A2 114 aa13.34□□□□□ -0.27
IGHV1-17-201ENST00000520119 CYP2B6P20813 491 aa13.34□□□□□ -0.27
IGHV1-17-201ENST00000520119 FXR1P51114 621 aaKnown RBP eCLIP13.34□□□□□ -0.27
IGHV1-17-201ENST00000520119 GABPAQ06546 454 aa13.34□□□□□ -0.27
IGHV1-17-201ENST00000520119 CAMK2BQ13554 666 aa13.34□□□□□ -0.27
IGHV1-17-201ENST00000520119 ZYXQ15942 572 aaKnown RBP13.34□□□□□ -0.27
IGHV1-17-201ENST00000520119 Q3C1V9 767 aa13.34□□□□□ -0.27
IGHV1-17-201ENST00000520119 ANKLE1Q8NAG6 615 aa13.34□□□□□ -0.27
IGHV1-17-201ENST00000520119 PAGR1Q9BTK6 254 aa13.34□□□□□ -0.27
IGHV1-17-201ENST00000520119 MCM9Q9NXL9 1143 aa13.34□□□□□ -0.27
IGHV1-17-201ENST00000520119 RABGAP1Q9Y3P9 1069 aa13.34□□□□□ -0.27
IGHV1-17-201ENST00000520119 PLXNB2O15031 1838 aa13.34□□□□□ -0.27
IGHV1-17-201ENST00000520119 PEX10O60683 326 aa13.33□□□□□ -0.28
IGHV1-17-201ENST00000520119 ATP5JP18859 108 aa13.33□□□□□ -0.28
IGHV1-17-201ENST00000520119 CCNA1P78396 465 aa13.33□□□□□ -0.28
IGHV1-17-201ENST00000520119 CATSPERGQ6ZRH7 1159 aa13.33□□□□□ -0.28
IGHV1-17-201ENST00000520119 GPR142Q7Z601 462 aa13.33□□□□□ -0.28
IGHV1-17-201ENST00000520119 NECAB2Q7Z6G3 386 aa13.33□□□□□ -0.28
IGHV1-17-201ENST00000520119 PLEKHH3Q7Z736 793 aa13.33□□□□□ -0.28
IGHV1-17-201ENST00000520119 TRIB2Q92519 343 aa13.33□□□□□ -0.28
IGHV1-17-201ENST00000520119 PAWRQ96IZ0 340 aaKnown RBP13.33□□□□□ -0.28
IGHV1-17-201ENST00000520119 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.33□□□□□ -0.28
IGHV1-17-201ENST00000520119 BCL11AQ9H165 835 aa13.33□□□□□ -0.28
IGHV1-17-201ENST00000520119 PORCNQ9H237 461 aa13.33□□□□□ -0.28
IGHV1-17-201ENST00000520119 DCP1AQ9NPI6 582 aaPredicted RBP13.33□□□□□ -0.28
IGHV1-17-201ENST00000520119 PAG1Q9NWQ8 432 aa13.33□□□□□ -0.28
IGHV1-17-201ENST00000520119 NAV1Q8NEY1 1877 aa13.33□□□□□ -0.28
IGHV1-17-201ENST00000520119 DDX60LQ5H9U9 1706 aaKnown RBP13.33□□□□□ -0.28
IGHV1-17-201ENST00000520119 EVI5O60447 810 aa13.32□□□□□ -0.28
IGHV1-17-201ENST00000520119 GLRX3O76003 335 aaKnown RBP13.32□□□□□ -0.28
IGHV1-17-201ENST00000520119 VCAM1P19320 739 aa13.32□□□□□ -0.28
IGHV1-17-201ENST00000520119 RGS2P41220 211 aa13.32□□□□□ -0.28
IGHV1-17-201ENST00000520119 TRIM32Q13049 653 aa13.32□□□□□ -0.28
IGHV1-17-201ENST00000520119 MAP3K21Q5TCX8 1036 aa13.32□□□□□ -0.28
IGHV1-17-201ENST00000520119 POTEEQ6S8J3 1075 aa13.32□□□□□ -0.28
IGHV1-17-201ENST00000520119 LBX2Q6XYB7 198 aa13.32□□□□□ -0.28
IGHV1-17-201ENST00000520119 LCORLQ8N3X6 602 aa13.32□□□□□ -0.28
IGHV1-17-201ENST00000520119 ACER1Q8TDN7 264 aa13.32□□□□□ -0.28
IGHV1-17-201ENST00000520119 SDR42E1Q8WUS8 393 aa13.32□□□□□ -0.28
IGHV1-17-201ENST00000520119 USP6NLQ92738 828 aa13.32□□□□□ -0.28
IGHV1-17-201ENST00000520119 BOLA2Q9H3K6 86 aa13.32□□□□□ -0.28
IGHV1-17-201ENST00000520119 CWC22Q9HCG8 908 aaKnown RBP13.32□□□□□ -0.28
IGHV1-17-201ENST00000520119 SZT2Q5T011 3432 aa13.31□□□□□ -0.28
IGHV1-17-201ENST00000520119 MPHOSPH10O00566 681 aaKnown RBP13.31□□□□□ -0.28
IGHV1-17-201ENST00000520119 ZKSCAN1P17029 563 aaPredicted RBP13.31□□□□□ -0.28
IGHV1-17-201ENST00000520119 GUCY1A2P33402 732 aa13.31□□□□□ -0.28
IGHV1-17-201ENST00000520119 ADD2P35612 726 aa13.31□□□□□ -0.28
IGHV1-17-201ENST00000520119 SEPT2Q15019 361 aa13.31□□□□□ -0.28
IGHV1-17-201ENST00000520119 MORN1Q5T089 497 aa13.31□□□□□ -0.28
IGHV1-17-201ENST00000520119 PLPP6Q8IY26 295 aa13.31□□□□□ -0.28
IGHV1-17-201ENST00000520119 EDC3Q96F86 508 aaKnown RBP13.31□□□□□ -0.28
IGHV1-17-201ENST00000520119 HAUS7Q99871 368 aa13.31□□□□□ -0.28
IGHV1-17-201ENST00000520119 LRRCC1Q9C099 1032 aa13.31□□□□□ -0.28
IGHV1-17-201ENST00000520119 ARMT1Q9H993 441 aa13.31□□□□□ -0.28
IGHV1-17-201ENST00000520119 ATP8A2Q9NTI2 1148 aa13.31□□□□□ -0.28
IGHV1-17-201ENST00000520119 SWAP70Q9UH65 585 aa13.31□□□□□ -0.28
IGHV1-17-201ENST00000520119 CNMDO75829 334 aa13.3□□□□□ -0.28
IGHV1-17-201ENST00000520119 MBD4O95243 580 aa13.3□□□□□ -0.28
IGHV1-17-201ENST00000520119 UBE3CQ15386 1083 aa13.3□□□□□ -0.28
IGHV1-17-201ENST00000520119 TMEM179Q6ZVK1 233 aa13.3□□□□□ -0.28
IGHV1-17-201ENST00000520119 DIS3LQ8TF46 1054 aaKnown RBP13.3□□□□□ -0.28
IGHV1-17-201ENST00000520119 APBA2Q99767 749 aa13.3□□□□□ -0.28
IGHV1-17-201ENST00000520119 NBPF3Q9H094 633 aa13.3□□□□□ -0.28
IGHV1-17-201ENST00000520119 RPAP3Q9H6T3 665 aaPredicted RBP13.3□□□□□ -0.28
IGHV1-17-201ENST00000520119 RBM27Q9P2N5 1060 aaKnown RBP13.3□□□□□ -0.28
IGHV1-17-201ENST00000520119 OGDHLQ9ULD0 1010 aa13.3□□□□□ -0.28
IGHV1-17-201ENST00000520119 SLC15A5A6NIM6 579 aa13.29□□□□□ -0.28
IGHV1-17-201ENST00000520119 SPDYE16A6NNV3 312 aaPredicted RBP13.29□□□□□ -0.28
IGHV1-17-201ENST00000520119 CACNB2Q08289 660 aaPredicted RBP13.29□□□□□ -0.28
IGHV1-17-201ENST00000520119 MAP2K5Q13163 448 aa13.29□□□□□ -0.28
IGHV1-17-201ENST00000520119 ZSCAN25Q6NSZ9 544 aa13.29□□□□□ -0.28
IGHV1-17-201ENST00000520119 AMOTL1Q8IY63 956 aa13.29□□□□□ -0.28
IGHV1-17-201ENST00000520119 DDRGK1Q96HY6 314 aa13.29□□□□□ -0.28
IGHV1-17-201ENST00000520119 PRO3102Q9H379 93 aa13.29□□□□□ -0.28
IGHV1-17-201ENST00000520119 HOXC10Q9NYD6 342 aa13.29□□□□□ -0.28
IGHV1-17-201ENST00000520119 IVNS1ABPQ9Y6Y0 642 aa13.29□□□□□ -0.28
IGHV1-17-201ENST00000520119 A0A1W2PRG0 241 aa13.28□□□□□ -0.28
IGHV1-17-201ENST00000520119 PRKAB2O43741 272 aa13.28□□□□□ -0.28
IGHV1-17-201ENST00000520119 CYP2D6P10635 497 aa13.28□□□□□ -0.28
IGHV1-17-201ENST00000520119 PTPREP23469 700 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms