RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 DPH2Q9BQC3 489 aaPredicted RBP5.69□□□□□ -1.5
CSMD3-209ENST00000519485 TTF2Q9UNY4 1162 aaKnown RBP5.69□□□□□ -1.5
CSMD3-209ENST00000519485 KCTD3Q9Y597 815 aa5.69□□□□□ -1.5
CSMD3-209ENST00000519485 PCDHA11Q9Y5I1 949 aa5.69□□□□□ -1.5
CSMD3-209ENST00000519485 RBAK-RBAKDNI3L0D1 243 aa5.68□□□□□ -1.5
CSMD3-209ENST00000519485 RPL6Q02878 288 aaKnown RBP5.68□□□□□ -1.5
CSMD3-209ENST00000519485 DUSP4Q13115 394 aa5.68□□□□□ -1.5
CSMD3-209ENST00000519485 SEPT6Q14141 434 aa5.68□□□□□ -1.5
CSMD3-209ENST00000519485 NFIXQ14938 502 aa5.68□□□□□ -1.5
CSMD3-209ENST00000519485 RNF141Q8WVD5 230 aa5.68□□□□□ -1.5
CSMD3-209ENST00000519485 LINC01599Q8WXQ3 324 aa5.68□□□□□ -1.5
CSMD3-209ENST00000519485 ACSF2Q96CM8 615 aaPredicted RBP5.68□□□□□ -1.5
CSMD3-209ENST00000519485 WWC3Q9ULE0 1092 aa5.68□□□□□ -1.5
CSMD3-209ENST00000519485 PCDHB5Q9Y5E4 795 aa5.68□□□□□ -1.5
CSMD3-209ENST00000519485 RBM47A0AV96 593 aaKnown RBP5.67□□□□□ -1.5
CSMD3-209ENST00000519485 TRIM13O60858 407 aa5.67□□□□□ -1.5
CSMD3-209ENST00000519485 TSNAXIP1Q2TAA8 658 aa5.67□□□□□ -1.5
CSMD3-209ENST00000519485 SYTL4Q96C24 671 aaPredicted RBP5.67□□□□□ -1.5
CSMD3-209ENST00000519485 MIR1-1HGQ9H1L0 117 aa5.67□□□□□ -1.5
CSMD3-209ENST00000519485 BRD1O95696 1058 aa5.66□□□□□ -1.5
CSMD3-209ENST00000519485 LMNB1P20700 586 aa5.66□□□□□ -1.5
CSMD3-209ENST00000519485 LTKP29376 864 aa5.66□□□□□ -1.5
CSMD3-209ENST00000519485 CCDC85BQ15834 202 aaPredicted RBP5.66□□□□□ -1.5
CSMD3-209ENST00000519485 TMEM201Q5SNT2 666 aa5.66□□□□□ -1.5
CSMD3-209ENST00000519485 TMEM132EQ6IEE7 984 aa5.66□□□□□ -1.5
CSMD3-209ENST00000519485 XYLT2Q9H1B5 865 aa5.66□□□□□ -1.5
CSMD3-209ENST00000519485 EBF1Q9UH73 591 aa5.66□□□□□ -1.5
CSMD3-209ENST00000519485 GNA15P30679 374 aa5.65□□□□□ -1.5
CSMD3-209ENST00000519485 LIG3P49916 1009 aa5.65□□□□□ -1.5
CSMD3-209ENST00000519485 TEKQ02763 1124 aa5.65□□□□□ -1.5
CSMD3-209ENST00000519485 CCDC84Q86UT8 332 aaPredicted RBP5.65□□□□□ -1.5
CSMD3-209ENST00000519485 SLFN12Q8IYM2 578 aa5.65□□□□□ -1.5
CSMD3-209ENST00000519485 DACT3Q96B18 629 aaPredicted RBP5.65□□□□□ -1.5
CSMD3-209ENST00000519485 SIGLEC10Q96LC7 697 aa5.65□□□□□ -1.5
CSMD3-209ENST00000519485 G6PC3Q9BUM1 346 aa5.65□□□□□ -1.5
CSMD3-209ENST00000519485 OR14I1A6ND48 311 aa5.64□□□□□ -1.51
CSMD3-209ENST00000519485 NOTOA8MTQ0 251 aa5.64□□□□□ -1.51
CSMD3-209ENST00000519485 PSPNO60542 156 aa5.64□□□□□ -1.51
CSMD3-209ENST00000519485 RLBP1P12271 317 aa5.64□□□□□ -1.51
CSMD3-209ENST00000519485 EIF4BP23588 611 aaKnown RBP5.64□□□□□ -1.51
CSMD3-209ENST00000519485 PDE6BP35913 854 aa5.64□□□□□ -1.51
CSMD3-209ENST00000519485 YARSP54577 528 aaKnown RBP5.64□□□□□ -1.51
CSMD3-209ENST00000519485 KRTAP10-2P60368 255 aa5.64□□□□□ -1.51
CSMD3-209ENST00000519485 SSPNQ14714 243 aa5.64□□□□□ -1.51
CSMD3-209ENST00000519485 NLRX1Q86UT6 975 aa5.64□□□□□ -1.51
CSMD3-209ENST00000519485 ASPNQ9BXN1 380 aa5.64□□□□□ -1.51
CSMD3-209ENST00000519485 CRTAC1Q9NQ79 661 aa5.64□□□□□ -1.51
CSMD3-209ENST00000519485 MBD1Q9UIS9 605 aaPredicted RBP5.64□□□□□ -1.51
CSMD3-209ENST00000519485 GPR160Q9UJ42 338 aa5.64□□□□□ -1.51
CSMD3-209ENST00000519485 TFE3P19532 575 aaPredicted RBP5.63□□□□□ -1.51
CSMD3-209ENST00000519485 ENOX1Q8TC92 643 aaKnown RBP5.63□□□□□ -1.51
CSMD3-209ENST00000519485 SGPP1Q9BX95 441 aa5.63□□□□□ -1.51
CSMD3-209ENST00000519485 PRR36Q9H6K5 1346 aa5.63□□□□□ -1.51
CSMD3-209ENST00000519485 SASH1O94885 1247 aa5.62□□□□□ -1.51
CSMD3-209ENST00000519485 P4HBP07237 508 aaKnown RBP5.62□□□□□ -1.51
CSMD3-209ENST00000519485 KIR2DL1P43626 348 aaPredicted RBP5.62□□□□□ -1.51
CSMD3-209ENST00000519485 KIR2DL2P43627 348 aaPredicted RBP5.62□□□□□ -1.51
CSMD3-209ENST00000519485 SKOR2Q2VWA4 1001 aaPredicted RBP5.62□□□□□ -1.51
CSMD3-209ENST00000519485 FAM13CQ8NE31 585 aa5.62□□□□□ -1.51
CSMD3-209ENST00000519485 IRAK3Q9Y616 596 aa5.62□□□□□ -1.51
CSMD3-209ENST00000519485 AK5Q9Y6K8 562 aa5.62□□□□□ -1.51
CSMD3-209ENST00000519485 SLC22A31A6NKX4 558 aa5.61□□□□□ -1.51
CSMD3-209ENST00000519485 IRS4O14654 1257 aaPredicted RBP5.61□□□□□ -1.51
CSMD3-209ENST00000519485 NRDCO43847 1150 aa5.61□□□□□ -1.51
CSMD3-209ENST00000519485 LDHBP07195 334 aaKnown RBP5.61□□□□□ -1.51
CSMD3-209ENST00000519485 PI3P19957 117 aa5.61□□□□□ -1.51
CSMD3-209ENST00000519485 YBX1P67809 324 aaKnown RBP5.61□□□□□ -1.51
CSMD3-209ENST00000519485 NFKB2Q00653 900 aa5.61□□□□□ -1.51
CSMD3-209ENST00000519485 DIEXFQ68CQ4 756 aaKnown RBP5.61□□□□□ -1.51
CSMD3-209ENST00000519485 RNF111Q6ZNA4 994 aa5.61□□□□□ -1.51
CSMD3-209ENST00000519485 VWCEQ96DN2 955 aa5.61□□□□□ -1.51
CSMD3-209ENST00000519485 KREMEN1Q96MU8 473 aa5.61□□□□□ -1.51
CSMD3-209ENST00000519485 NOC4LQ9BVI4 516 aaKnown RBP5.61□□□□□ -1.51
CSMD3-209ENST00000519485 ADAMTS20P59510 1910 aa5.6□□□□□ -1.51
CSMD3-209ENST00000519485 N4BP3O15049 544 aa5.6□□□□□ -1.51
CSMD3-209ENST00000519485 LRRN2O75325 713 aa5.6□□□□□ -1.51
CSMD3-209ENST00000519485 PRPF40AO75400 957 aaKnown RBP5.6□□□□□ -1.51
CSMD3-209ENST00000519485 SRSF3P84103 164 aaKnown RBP5.6□□□□□ -1.51
CSMD3-209ENST00000519485 ERICH6BQ5W0A0 696 aa5.6□□□□□ -1.51
CSMD3-209ENST00000519485 SYTL5Q8TDW5 730 aaPredicted RBP5.6□□□□□ -1.51
CSMD3-209ENST00000519485 BORCS6Q96GS4 357 aa5.6□□□□□ -1.51
CSMD3-209ENST00000519485 IVNS1ABPQ9Y6Y0 642 aa5.6□□□□□ -1.51
CSMD3-209ENST00000519485 SHISA3A0PJX4 238 aa5.59□□□□□ -1.51
CSMD3-209ENST00000519485 UPK3BL1B0FP48 263 aa5.59□□□□□ -1.51
CSMD3-209ENST00000519485 UPK3BL2E5RIL1 263 aa5.59□□□□□ -1.51
CSMD3-209ENST00000519485 CILPO75339 1184 aa5.59□□□□□ -1.51
CSMD3-209ENST00000519485 EFEMP2O95967 443 aa5.59□□□□□ -1.51
CSMD3-209ENST00000519485 PLCG1P19174 1290 aa5.59□□□□□ -1.51
CSMD3-209ENST00000519485 ST13P50502 369 aaKnown RBP5.59□□□□□ -1.51
CSMD3-209ENST00000519485 AFF3P51826 1226 aaKnown RBP5.59□□□□□ -1.51
CSMD3-209ENST00000519485 ADGRF1Q5T601 910 aa5.59□□□□□ -1.51
CSMD3-209ENST00000519485 OLFML2BQ68BL8 750 aa5.59□□□□□ -1.51
CSMD3-209ENST00000519485 SP8Q8IXZ3 490 aa5.59□□□□□ -1.51
CSMD3-209ENST00000519485 EPB41L4AQ9HCS5 686 aaPredicted RBP5.59□□□□□ -1.51
CSMD3-209ENST00000519485 CORINQ9Y5Q5 1042 aa5.59□□□□□ -1.51
CSMD3-209ENST00000519485 FAM221AA4D161 298 aa5.58□□□□□ -1.52
CSMD3-209ENST00000519485 OTOL1A6NHN0 477 aaPredicted RBP5.58□□□□□ -1.52
CSMD3-209ENST00000519485 ABLIM1O14639 778 aa5.58□□□□□ -1.52
CSMD3-209ENST00000519485 CELA3BP08861 270 aa5.58□□□□□ -1.52
CSMD3-209ENST00000519485 PNLIPP16233 465 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms