RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 SPDYE16A6NNV3 312 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC9-206ENST00000519482 USP17L12C9JPN9 530 aa14.95□□□□□ -0.02
TRAPPC9-206ENST00000519482 USP17L21D6R901 530 aa14.95□□□□□ -0.02
TRAPPC9-206ENST00000519482 ZKSCAN1P17029 563 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC9-206ENST00000519482 COG2Q14746 738 aa14.95□□□□□ -0.02
TRAPPC9-206ENST00000519482 NECAB2Q7Z6G3 386 aa14.95□□□□□ -0.02
TRAPPC9-206ENST00000519482 SLC44A5Q8NCS7 719 aa14.95□□□□□ -0.02
TRAPPC9-206ENST00000519482 APBA2Q99767 749 aa14.95□□□□□ -0.02
TRAPPC9-206ENST00000519482 PUS7LQ9H0K6 701 aaKnown RBP14.95□□□□□ -0.02
TRAPPC9-206ENST00000519482 SH2D4AQ9H788 454 aa14.95□□□□□ -0.02
TRAPPC9-206ENST00000519482 ARHGEF10LQ9HCE6 1279 aa14.95□□□□□ -0.02
TRAPPC9-206ENST00000519482 HOXC10Q9NYD6 342 aa14.95□□□□□ -0.02
TRAPPC9-206ENST00000519482 ZNF236Q9UL36 1845 aa14.94□□□□□ -0.02
TRAPPC9-206ENST00000519482 TRIOBPQ9H2D6 2365 aa14.94□□□□□ -0.02
TRAPPC9-206ENST00000519482 SLC15A5A6NIM6 579 aa14.94□□□□□ -0.02
TRAPPC9-206ENST00000519482 CHGBP05060 677 aa14.94□□□□□ -0.02
TRAPPC9-206ENST00000519482 PRKAR2AP13861 404 aaKnown RBP14.94□□□□□ -0.02
TRAPPC9-206ENST00000519482 AKR1B1P15121 316 aa14.94□□□□□ -0.02
TRAPPC9-206ENST00000519482 CDK8P49336 464 aa14.94□□□□□ -0.02
TRAPPC9-206ENST00000519482 MAP2K5Q13163 448 aa14.94□□□□□ -0.02
TRAPPC9-206ENST00000519482 C16orf86Q6ZW13 317 aa14.94□□□□□ -0.02
TRAPPC9-206ENST00000519482 KBTBD3Q8NAB2 608 aa14.94□□□□□ -0.02
TRAPPC9-206ENST00000519482 LPAR1Q92633 364 aa14.94□□□□□ -0.02
TRAPPC9-206ENST00000519482 PAWRQ96IZ0 340 aaKnown RBP14.94□□□□□ -0.02
TRAPPC9-206ENST00000519482 BTBD7Q9P203 1132 aa14.94□□□□□ -0.02
TRAPPC9-206ENST00000519482 OGDHLQ9ULD0 1010 aa14.94□□□□□ -0.02
TRAPPC9-206ENST00000519482 TMX2Q9Y320 296 aa14.94□□□□□ -0.02
TRAPPC9-206ENST00000519482 GREB1LQ9C091 1923 aaPredicted RBP14.94□□□□□ -0.02
TRAPPC9-206ENST00000519482 EVI5O60447 810 aa14.93□□□□□ -0.02
TRAPPC9-206ENST00000519482 PTPREP23469 700 aa14.93□□□□□ -0.02
TRAPPC9-206ENST00000519482 ICA1Q05084 483 aa14.93□□□□□ -0.02
TRAPPC9-206ENST00000519482 CACNB2Q08289 660 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC9-206ENST00000519482 CTR9Q6PD62 1173 aa14.93□□□□□ -0.02
TRAPPC9-206ENST00000519482 STRBPQ96SI9 672 aaKnown RBP14.93□□□□□ -0.02
TRAPPC9-206ENST00000519482 TANGO6Q9C0B7 1094 aa14.93□□□□□ -0.02
TRAPPC9-206ENST00000519482 ARPP21Q9UBL0 812 aaPredicted RBP14.93□□□□□ -0.02
TRAPPC9-206ENST00000519482 RBM19Q9Y4C8 960 aaKnown RBP14.93□□□□□ -0.02
TRAPPC9-206ENST00000519482 IVNS1ABPQ9Y6Y0 642 aa14.93□□□□□ -0.02
TRAPPC9-206ENST00000519482 COL11A1P12107 1806 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC9-206ENST00000519482 ZNFX1Q9P2E3 1918 aaKnown RBP14.92□□□□□ -0.02
TRAPPC9-206ENST00000519482 CYP2D7A0A087X1C5 515 aa14.92□□□□□ -0.02
TRAPPC9-206ENST00000519482 ZFYP08048 801 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC9-206ENST00000519482 HOXC6P09630 235 aa14.92□□□□□ -0.02
TRAPPC9-206ENST00000519482 FXR1P51114 621 aaKnown RBP eCLIP14.92□□□□□ -0.02
TRAPPC9-206ENST00000519482 CCL14Q16627 93 aa14.92□□□□□ -0.02
TRAPPC9-206ENST00000519482 SBK1Q52WX2 424 aa14.92□□□□□ -0.02
TRAPPC9-206ENST00000519482 WDR78Q5VTH9 848 aa14.92□□□□□ -0.02
TRAPPC9-206ENST00000519482 GIMAP6Q6P9H5 292 aa14.92□□□□□ -0.02
TRAPPC9-206ENST00000519482 CHRDL2Q6WN34 429 aa14.92□□□□□ -0.02
TRAPPC9-206ENST00000519482 SIAH1Q8IUQ4 282 aa14.92□□□□□ -0.02
TRAPPC9-206ENST00000519482 MB21D1Q8N884 522 aa14.92□□□□□ -0.02
TRAPPC9-206ENST00000519482 NBPF3Q9H094 633 aa14.92□□□□□ -0.02
TRAPPC9-206ENST00000519482 VCPKMTQ9H867 229 aa14.92□□□□□ -0.02
TRAPPC9-206ENST00000519482 TTC41PQ6P2S7 1318 aa14.92□□□□□ -0.02
TRAPPC9-206ENST00000519482 RNF113AO15541 343 aaKnown RBP14.91□□□□□ -0.02
TRAPPC9-206ENST00000519482 STRNO43815 780 aa14.91□□□□□ -0.02
TRAPPC9-206ENST00000519482 DSG3P32926 999 aa14.91□□□□□ -0.02
TRAPPC9-206ENST00000519482 GRB14Q14449 540 aa14.91□□□□□ -0.02
TRAPPC9-206ENST00000519482 LRRFIP1Q32MZ4 808 aaKnown RBP14.91□□□□□ -0.02
TRAPPC9-206ENST00000519482 SHCBP1Q8NEM2 672 aa14.91□□□□□ -0.02
TRAPPC9-206ENST00000519482 DIS3LQ8TF46 1054 aaKnown RBP14.91□□□□□ -0.02
TRAPPC9-206ENST00000519482 APPBP2Q92624 585 aa14.91□□□□□ -0.02
TRAPPC9-206ENST00000519482 KANSL2Q9H9L4 492 aa14.91□□□□□ -0.02
TRAPPC9-206ENST00000519482 MYH4Q9Y623 1939 aa14.9□□□□□ -0.02
TRAPPC9-206ENST00000519482 GSG1L2A8MUP6 293 aa14.9□□□□□ -0.02
TRAPPC9-206ENST00000519482 SMIM22K7EJ46 135 aa14.9□□□□□ -0.02
TRAPPC9-206ENST00000519482 WDR46O15213 610 aaKnown RBP14.9□□□□□ -0.02
TRAPPC9-206ENST00000519482 GNAT2P19087 354 aa14.9□□□□□ -0.02
TRAPPC9-206ENST00000519482 MNX1P50219 401 aaPredicted RBP14.9□□□□□ -0.02
TRAPPC9-206ENST00000519482 KIAA1755Q5JYT7 1200 aa14.9□□□□□ -0.02
TRAPPC9-206ENST00000519482 MFSD14CQ5VZR4 134 aa14.9□□□□□ -0.02
TRAPPC9-206ENST00000519482 MOV10L1Q9BXT6 1211 aaKnown RBP14.9□□□□□ -0.02
TRAPPC9-206ENST00000519482 SPATC1LQ9H0A9 340 aa14.9□□□□□ -0.02
TRAPPC9-206ENST00000519482 C11orf49Q9H6J7 331 aa14.9□□□□□ -0.02
TRAPPC9-206ENST00000519482 PCDHB15Q9Y5E8 787 aa14.9□□□□□ -0.02
TRAPPC9-206ENST00000519482 ROBO3Q96MS0 1386 aa14.89□□□□□ -0.03
TRAPPC9-206ENST00000519482 ERC2O15083 957 aa14.89□□□□□ -0.03
TRAPPC9-206ENST00000519482 FLOT1O75955 427 aa14.89□□□□□ -0.03
TRAPPC9-206ENST00000519482 EEF2P13639 858 aaKnown RBP14.89□□□□□ -0.03
TRAPPC9-206ENST00000519482 CCND3P30281 292 aaPredicted RBP14.89□□□□□ -0.03
TRAPPC9-206ENST00000519482 ATP2B2Q01814 1243 aa14.89□□□□□ -0.03
TRAPPC9-206ENST00000519482 LHX8Q68G74 356 aa14.89□□□□□ -0.03
TRAPPC9-206ENST00000519482 CLEC10AQ8IUN9 316 aa14.89□□□□□ -0.03
TRAPPC9-206ENST00000519482 OSBP2Q969R2 916 aa14.89□□□□□ -0.03
TRAPPC9-206ENST00000519482 PRO3102Q9H379 93 aa14.89□□□□□ -0.03
TRAPPC9-206ENST00000519482 MROH8Q9H579 483 aa14.89□□□□□ -0.03
TRAPPC9-206ENST00000519482 RBM27Q9P2N5 1060 aaKnown RBP14.89□□□□□ -0.03
TRAPPC9-206ENST00000519482 TSHZ3Q63HK5 1081 aa14.88□□□□□ -0.03
TRAPPC9-206ENST00000519482 SPICE1Q8N0Z3 855 aa14.88□□□□□ -0.03
TRAPPC9-206ENST00000519482 NPLOC4Q8TAT6 608 aa14.88□□□□□ -0.03
TRAPPC9-206ENST00000519482 GOPCQ9HD26 462 aa14.88□□□□□ -0.03
TRAPPC9-206ENST00000519482 FLRT1Q9NZU1 646 aa14.88□□□□□ -0.03
TRAPPC9-206ENST00000519482 PLXNA1Q9UIW2 1896 aa14.87□□□□□ -0.03
TRAPPC9-206ENST00000519482 A0A1W2PPC1 479 aa14.87□□□□□ -0.03
TRAPPC9-206ENST00000519482 GPAA1O43292 621 aa14.87□□□□□ -0.03
TRAPPC9-206ENST00000519482 MSCO60682 206 aa14.87□□□□□ -0.03
TRAPPC9-206ENST00000519482 IGHA2P01877 340 aa14.87□□□□□ -0.03
TRAPPC9-206ENST00000519482 ERCC3P19447 782 aa14.87□□□□□ -0.03
TRAPPC9-206ENST00000519482 ADORA2AP29274 412 aa14.87□□□□□ -0.03
TRAPPC9-206ENST00000519482 OLFML2BQ68BL8 750 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms