RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 GPATCH3Q96I76 525 aa13.09□□□□□ -0.31
PVT1-208ENST00000519481 SPDYE16A6NNV3 312 aaPredicted RBP13.08□□□□□ -0.32
PVT1-208ENST00000519481 CYP2D6P10635 497 aa13.08□□□□□ -0.32
PVT1-208ENST00000519481 ICA1Q05084 483 aa13.08□□□□□ -0.32
PVT1-208ENST00000519481 CCL14Q16627 93 aa13.08□□□□□ -0.32
PVT1-208ENST00000519481 MB21D1Q8N884 522 aa13.08□□□□□ -0.32
PVT1-208ENST00000519481 SLC44A5Q8NCS7 719 aa13.08□□□□□ -0.32
PVT1-208ENST00000519481 BTBD7Q9P203 1132 aa13.08□□□□□ -0.32
PVT1-208ENST00000519481 PLXNB2O15031 1838 aa13.08□□□□□ -0.32
PVT1-208ENST00000519481 A0A1W2PRG0 241 aa13.07□□□□□ -0.32
PVT1-208ENST00000519481 USP17L12C9JPN9 530 aa13.07□□□□□ -0.32
PVT1-208ENST00000519481 USP17L21D6R901 530 aa13.07□□□□□ -0.32
PVT1-208ENST00000519481 PRKAB2O43741 272 aa13.07□□□□□ -0.32
PVT1-208ENST00000519481 STRNO43815 780 aa13.07□□□□□ -0.32
PVT1-208ENST00000519481 MSCO60682 206 aa13.07□□□□□ -0.32
PVT1-208ENST00000519481 GRB14Q14449 540 aa13.07□□□□□ -0.32
PVT1-208ENST00000519481 C12orf60Q5U649 245 aa13.07□□□□□ -0.32
PVT1-208ENST00000519481 POTEEQ6S8J3 1075 aa13.07□□□□□ -0.32
PVT1-208ENST00000519481 DPP9Q86TI2 863 aa13.07□□□□□ -0.32
PVT1-208ENST00000519481 DYNLL2Q96FJ2 89 aa13.07□□□□□ -0.32
PVT1-208ENST00000519481 ECHDC1Q9NTX5 307 aa13.07□□□□□ -0.32
PVT1-208ENST00000519481 SLC5A4Q9NY91 659 aa13.07□□□□□ -0.32
PVT1-208ENST00000519481 STAP2Q9UGK3 403 aa13.07□□□□□ -0.32
PVT1-208ENST00000519481 SLC4A4Q9Y6R1 1079 aa13.07□□□□□ -0.32
PVT1-208ENST00000519481 DDX60LQ5H9U9 1706 aaKnown RBP13.06□□□□□ -0.32
PVT1-208ENST00000519481 SMARCA5O60264 1052 aaPredicted RBP13.06□□□□□ -0.32
PVT1-208ENST00000519481 FLOT1O75955 427 aa13.06□□□□□ -0.32
PVT1-208ENST00000519481 HOXC6P09630 235 aa13.06□□□□□ -0.32
PVT1-208ENST00000519481 AKR1B1P15121 316 aa13.06□□□□□ -0.32
PVT1-208ENST00000519481 CNGA1P29973 690 aa13.06□□□□□ -0.32
PVT1-208ENST00000519481 CCND3P30281 292 aaPredicted RBP13.06□□□□□ -0.32
PVT1-208ENST00000519481 CDK8P49336 464 aa13.06□□□□□ -0.32
PVT1-208ENST00000519481 SHCBP1Q8NEM2 672 aa13.06□□□□□ -0.32
PVT1-208ENST00000519481 SPATC1LQ9H0A9 340 aa13.06□□□□□ -0.32
PVT1-208ENST00000519481 PRO3102Q9H379 93 aa13.06□□□□□ -0.32
PVT1-208ENST00000519481 VCPKMTQ9H867 229 aa13.06□□□□□ -0.32
PVT1-208ENST00000519481 ZMYND8Q9ULU4 1186 aaPredicted RBP13.06□□□□□ -0.32
PVT1-208ENST00000519481 TMX2Q9Y320 296 aa13.06□□□□□ -0.32
PVT1-208ENST00000519481 WDR46O15213 610 aaKnown RBP13.05□□□□□ -0.32
PVT1-208ENST00000519481 MNX1P50219 401 aaPredicted RBP13.05□□□□□ -0.32
PVT1-208ENST00000519481 EVX2Q03828 476 aa13.05□□□□□ -0.32
PVT1-208ENST00000519481 PLS1Q14651 629 aa13.05□□□□□ -0.32
PVT1-208ENST00000519481 LRRFIP1Q32MZ4 808 aaKnown RBP13.05□□□□□ -0.32
PVT1-208ENST00000519481 SLFNL1Q499Z3 407 aa13.05□□□□□ -0.32
PVT1-208ENST00000519481 C20orf194Q5TEA3 1177 aa13.05□□□□□ -0.32
PVT1-208ENST00000519481 SAMD1Q6SPF0 538 aaPredicted RBP13.05□□□□□ -0.32
PVT1-208ENST00000519481 C16orf86Q6ZW13 317 aa13.05□□□□□ -0.32
PVT1-208ENST00000519481 MOV10L1Q9BXT6 1211 aaKnown RBP13.05□□□□□ -0.32
PVT1-208ENST00000519481 MROH8Q9H579 483 aa13.05□□□□□ -0.32
PVT1-208ENST00000519481 KANSL2Q9H9L4 492 aa13.05□□□□□ -0.32
PVT1-208ENST00000519481 ARPP21Q9UBL0 812 aaPredicted RBP13.05□□□□□ -0.32
PVT1-208ENST00000519481 CYP2D7A0A087X1C5 515 aa13.04□□□□□ -0.32
PVT1-208ENST00000519481 ADORA2AP29274 412 aa13.04□□□□□ -0.32
PVT1-208ENST00000519481 DSG3P32926 999 aa13.04□□□□□ -0.32
PVT1-208ENST00000519481 BMP8BP34820 402 aa13.04□□□□□ -0.32
PVT1-208ENST00000519481 LHX8Q68G74 356 aa13.04□□□□□ -0.32
PVT1-208ENST00000519481 NCAPG2Q86XI2 1143 aa13.04□□□□□ -0.32
PVT1-208ENST00000519481 SPICE1Q8N0Z3 855 aa13.04□□□□□ -0.32
PVT1-208ENST00000519481 NPLOC4Q8TAT6 608 aa13.04□□□□□ -0.32
PVT1-208ENST00000519481 GOPCQ9HD26 462 aa13.04□□□□□ -0.32
PVT1-208ENST00000519481 DDX20Q9UHI6 824 aaKnown RBP13.04□□□□□ -0.32
PVT1-208ENST00000519481 RAD21O60216 631 aa13.03□□□□□ -0.32
PVT1-208ENST00000519481 SLC25A27O95847 323 aa13.03□□□□□ -0.32
PVT1-208ENST00000519481 ZFYP08048 801 aaPredicted RBP13.03□□□□□ -0.32
PVT1-208ENST00000519481 COL6A1P12109 1028 aa13.03□□□□□ -0.32
PVT1-208ENST00000519481 ERCC3P19447 782 aa13.03□□□□□ -0.32
PVT1-208ENST00000519481 CYP2C19P33261 490 aa13.03□□□□□ -0.32
PVT1-208ENST00000519481 CACNB1Q02641 598 aaPredicted RBP13.03□□□□□ -0.32
PVT1-208ENST00000519481 OLFML2BQ68BL8 750 aa13.03□□□□□ -0.32
PVT1-208ENST00000519481 CTR9Q6PD62 1173 aa13.03□□□□□ -0.32
PVT1-208ENST00000519481 KBTBD3Q8NAB2 608 aa13.03□□□□□ -0.32
PVT1-208ENST00000519481 ATG4CQ96DT6 458 aa13.03□□□□□ -0.32
PVT1-208ENST00000519481 GDF15Q99988 308 aa13.03□□□□□ -0.32
PVT1-208ENST00000519481 PUS7LQ9H0K6 701 aaKnown RBP13.03□□□□□ -0.32
PVT1-208ENST00000519481 MKNK2Q9HBH9 465 aa13.03□□□□□ -0.32
PVT1-208ENST00000519481 FOXD4L1Q9NU39 408 aa13.03□□□□□ -0.32
PVT1-208ENST00000519481 FLRT1Q9NZU1 646 aa13.03□□□□□ -0.32
PVT1-208ENST00000519481 PFASO15067 1338 aa13.03□□□□□ -0.32
PVT1-208ENST00000519481 MYH8P13535 1937 aa13.03□□□□□ -0.32
PVT1-208ENST00000519481 FCER1AP12319 257 aa13.02□□□□□ -0.33
PVT1-208ENST00000519481 EEF2P13639 858 aaKnown RBP13.02□□□□□ -0.33
PVT1-208ENST00000519481 SYN1P17600 705 aa13.02□□□□□ -0.33
PVT1-208ENST00000519481 SBK1Q52WX2 424 aa13.02□□□□□ -0.33
PVT1-208ENST00000519481 GIMAP6Q6P9H5 292 aa13.02□□□□□ -0.33
PVT1-208ENST00000519481 CLEC10AQ8IUN9 316 aa13.02□□□□□ -0.33
PVT1-208ENST00000519481 SIAH1Q8IUQ4 282 aa13.02□□□□□ -0.33
PVT1-208ENST00000519481 ABRAQ8N0Z2 381 aa13.02□□□□□ -0.33
PVT1-208ENST00000519481 ARRDC4Q8NCT1 418 aa13.02□□□□□ -0.33
PVT1-208ENST00000519481 APPBP2Q92624 585 aa13.02□□□□□ -0.33
PVT1-208ENST00000519481 STRBPQ96SI9 672 aaKnown RBP13.02□□□□□ -0.33
PVT1-208ENST00000519481 SENP6Q9GZR1 1112 aaPredicted RBP13.02□□□□□ -0.33
PVT1-208ENST00000519481 DCTPP1Q9H773 170 aa13.02□□□□□ -0.33
PVT1-208ENST00000519481 ZNF287Q9HBT7 754 aa13.02□□□□□ -0.33
PVT1-208ENST00000519481 BAZ2AQ9UIF9 1905 aaKnown RBP13.01□□□□□ -0.33
PVT1-208ENST00000519481 MINDY4BA8MYZ0 360 aa13.01□□□□□ -0.33
PVT1-208ENST00000519481 ERC2O15083 957 aa13.01□□□□□ -0.33
PVT1-208ENST00000519481 CHGBP05060 677 aa13.01□□□□□ -0.33
PVT1-208ENST00000519481 GNAT2P19087 354 aa13.01□□□□□ -0.33
PVT1-208ENST00000519481 COPB2P35606 906 aa13.01□□□□□ -0.33
PVT1-208ENST00000519481 KIAA1755Q5JYT7 1200 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms