RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 ZYXQ15942 572 aaKnown RBP10.31□□□□□ -0.76
CTNNA1-215ENST00000519309 CERS3Q8IU89 383 aa10.31□□□□□ -0.76
CTNNA1-215ENST00000519309 ABRAQ8N0Z2 381 aa10.31□□□□□ -0.76
CTNNA1-215ENST00000519309 ADAMTS19Q8TE59 1207 aa10.31□□□□□ -0.76
CTNNA1-215ENST00000519309 FAM122AQ96E09 287 aa10.31□□□□□ -0.76
CTNNA1-215ENST00000519309 MEIS3Q99687 375 aa10.31□□□□□ -0.76
CTNNA1-215ENST00000519309 MOV10L1Q9BXT6 1211 aaKnown RBP10.31□□□□□ -0.76
CTNNA1-215ENST00000519309 ZNF576Q9H609 170 aa10.31□□□□□ -0.76
CTNNA1-215ENST00000519309 TRANK1O15050 2925 aa10.31□□□□□ -0.76
CTNNA1-215ENST00000519309 SYNGAP1Q96PV0 1343 aa10.31□□□□□ -0.76
CTNNA1-215ENST00000519309 E9PSI1 815 aa10.3□□□□□ -0.76
CTNNA1-215ENST00000519309 SRGAP3O43295 1099 aa10.3□□□□□ -0.76
CTNNA1-215ENST00000519309 RASIP1Q5U651 963 aa10.3□□□□□ -0.76
CTNNA1-215ENST00000519309 ANO1Q5XXA6 986 aa10.3□□□□□ -0.76
CTNNA1-215ENST00000519309 ANKRD33Q7Z3H0 272 aa10.3□□□□□ -0.76
CTNNA1-215ENST00000519309 DPP9Q86TI2 863 aa10.3□□□□□ -0.76
CTNNA1-215ENST00000519309 TIFAQ96CG3 184 aa10.3□□□□□ -0.76
CTNNA1-215ENST00000519309 NEUROD6Q96NK8 337 aa10.3□□□□□ -0.76
CTNNA1-215ENST00000519309 TOX2Q96NM4 488 aa10.3□□□□□ -0.76
CTNNA1-215ENST00000519309 ASB2Q96Q27 587 aa10.3□□□□□ -0.76
CTNNA1-215ENST00000519309 SPATC1LQ9H0A9 340 aa10.3□□□□□ -0.76
CTNNA1-215ENST00000519309 RPAP3Q9H6T3 665 aaPredicted RBP10.3□□□□□ -0.76
CTNNA1-215ENST00000519309 SMC4Q9NTJ3 1288 aa10.3□□□□□ -0.76
CTNNA1-215ENST00000519309 SERPINB13Q9UIV8 391 aa10.3□□□□□ -0.76
CTNNA1-215ENST00000519309 ARIH1Q9Y4X5 557 aaPredicted RBP10.3□□□□□ -0.76
CTNNA1-215ENST00000519309 REV3LO60673 3130 aa10.3□□□□□ -0.76
CTNNA1-215ENST00000519309 A0A1W2PQ45 241 aaPredicted RBP10.29□□□□□ -0.76
CTNNA1-215ENST00000519309 A0A1W2PQY0 241 aa10.29□□□□□ -0.76
CTNNA1-215ENST00000519309 COBLO75128 1261 aa10.29□□□□□ -0.76
CTNNA1-215ENST00000519309 RAG1P15918 1043 aa10.29□□□□□ -0.76
CTNNA1-215ENST00000519309 ERCC3P19447 782 aa10.29□□□□□ -0.76
CTNNA1-215ENST00000519309 GORABQ5T7V8 394 aa10.29□□□□□ -0.76
CTNNA1-215ENST00000519309 FAM9BQ8IZU0 186 aa10.29□□□□□ -0.76
CTNNA1-215ENST00000519309 MB21D1Q8N884 522 aa10.29□□□□□ -0.76
CTNNA1-215ENST00000519309 ACER1Q8TDN7 264 aa10.29□□□□□ -0.76
CTNNA1-215ENST00000519309 FERMT2Q96AC1 680 aa10.29□□□□□ -0.76
CTNNA1-215ENST00000519309 MAML3Q96JK9 1138 aa10.29□□□□□ -0.76
CTNNA1-215ENST00000519309 UHRF1Q96T88 793 aaPredicted RBP10.29□□□□□ -0.76
CTNNA1-215ENST00000519309 GAS2L1Q99501 681 aaPredicted RBP10.29□□□□□ -0.76
CTNNA1-215ENST00000519309 XPNPEP3Q9NQH7 507 aa10.29□□□□□ -0.76
CTNNA1-215ENST00000519309 SLC5A4Q9NY91 659 aa10.29□□□□□ -0.76
CTNNA1-215ENST00000519309 SAP30BPQ9UHR5 308 aaKnown RBP10.29□□□□□ -0.76
CTNNA1-215ENST00000519309 TBX21Q9UL17 535 aa10.29□□□□□ -0.76
CTNNA1-215ENST00000519309 ADAMTS4O75173 837 aa10.28□□□□□ -0.76
CTNNA1-215ENST00000519309 CYP2E1P05181 493 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-215ENST00000519309 GNAI3P08754 354 aa10.28□□□□□ -0.76
CTNNA1-215ENST00000519309 RARBP10826 455 aa10.28□□□□□ -0.76
CTNNA1-215ENST00000519309 GUCY1A2P33402 732 aa10.28□□□□□ -0.76
CTNNA1-215ENST00000519309 MRPS5P82675 430 aaKnown RBP10.28□□□□□ -0.76
CTNNA1-215ENST00000519309 MAPK8IP2Q13387 824 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-215ENST00000519309 RAB3GAP1Q15042 981 aa10.28□□□□□ -0.76
CTNNA1-215ENST00000519309 ABCB5Q2M3G0 1257 aa10.28□□□□□ -0.76
CTNNA1-215ENST00000519309 RNF180Q86T96 592 aa10.28□□□□□ -0.76
CTNNA1-215ENST00000519309 ZNF512BQ96KM6 892 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-215ENST00000519309 PBX4Q9BYU1 374 aa10.28□□□□□ -0.76
CTNNA1-215ENST00000519309 API5Q9BZZ5 524 aaKnown RBP10.28□□□□□ -0.76
CTNNA1-215ENST00000519309 MROH8Q9H579 483 aa10.28□□□□□ -0.76
CTNNA1-215ENST00000519309 GPR108Q9NPR9 543 aa10.28□□□□□ -0.76
CTNNA1-215ENST00000519309 LRRC37A2A6NM11 1700 aa10.27□□□□□ -0.76
CTNNA1-215ENST00000519309 MUC6Q6W4X9 2439 aa10.27□□□□□ -0.76
CTNNA1-215ENST00000519309 GREB1LQ9C091 1923 aaPredicted RBP10.27□□□□□ -0.76
CTNNA1-215ENST00000519309 XIRP2A4UGR9 3374 aa10.27□□□□□ -0.77
CTNNA1-215ENST00000519309 TCF20Q9UGU0 1960 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-215ENST00000519309 PQBP1O60828 265 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-215ENST00000519309 CT47B1P0C2W7 299 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-215ENST00000519309 SHMT1P34896 483 aa10.27□□□□□ -0.77
CTNNA1-215ENST00000519309 FAAP100Q0VG06 881 aa10.27□□□□□ -0.77
CTNNA1-215ENST00000519309 MAP3K12Q12852 859 aa10.27□□□□□ -0.77
CTNNA1-215ENST00000519309 COG2Q14746 738 aa10.27□□□□□ -0.77
CTNNA1-215ENST00000519309 CERKLQ49MI3 558 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-215ENST00000519309 TMED8Q6PL24 325 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-215ENST00000519309 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.27□□□□□ -0.771e-11■■□□□ 13.1
CTNNA1-215ENST00000519309 TSEN34Q9BSV6 310 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-215ENST00000519309 HOXC10Q9NYD6 342 aa10.27□□□□□ -0.77
CTNNA1-215ENST00000519309 MCM3APO60318 1980 aa10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 TIMP1P01033 207 aa10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 MYCNP04198 464 aaPredicted RBP10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 AKR1A1P14550 325 aa10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 DYNLL1P63167 89 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 GABPAQ06546 454 aa10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 SLFN5Q08AF3 891 aa10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 PPIGQ13427 754 aaKnown RBP eCLIP10.26□□□□□ -0.772e-8■□□□□ 10.5
CTNNA1-215ENST00000519309 ADGRE1Q14246 886 aa10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 TTC39AQ5SRH9 613 aa10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 PRAMEF19Q5SWL8 479 aa10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 MFSD5Q6N075 450 aa10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 PSRC1Q6PGN9 363 aaPredicted RBP10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 CCDC174Q6PII3 467 aa10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 TTC6Q86TZ1 520 aa10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 SLC44A5Q8NCS7 719 aa10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 C1QTNF1Q9BXJ1 281 aa10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 PRDM12Q9H4Q4 367 aa10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 CABP5Q9NP86 173 aa10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 PIH1D3Q9NQM4 214 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 SNRKQ9NRH2 765 aa10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 TMEM39AQ9NV64 488 aa10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 DIS3Q9Y2L1 958 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 MROH7Q68CQ1 1323 aa10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 SYNRGQ9UMZ2 1314 aa10.26□□□□□ -0.77
CTNNA1-215ENST00000519309 A0A1W2PRG0 241 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms