RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 MOV10L1Q9BXT6 1211 aaKnown RBP23.04■■□□□ 1.28
CTNNA1-213ENST00000519113 SPATC1LQ9H0A9 340 aa23.04■■□□□ 1.28
CTNNA1-213ENST00000519113 SEPT4O43236 478 aa23.03■■□□□ 1.28
CTNNA1-213ENST00000519113 GUCY1A2P33402 732 aa23.03■■□□□ 1.28
CTNNA1-213ENST00000519113 SEPT2Q15019 361 aa23.03■■□□□ 1.28
CTNNA1-213ENST00000519113 SHHQ15465 462 aa23.03■■□□□ 1.28
CTNNA1-213ENST00000519113 ZKSCAN2Q63HK3 967 aa23.03■■□□□ 1.28
CTNNA1-213ENST00000519113 EAF2Q96CJ1 260 aaPredicted RBP23.03■■□□□ 1.28
CTNNA1-213ENST00000519113 PRDM5Q9NQX1 630 aaPredicted RBP23.03■■□□□ 1.28
CTNNA1-213ENST00000519113 MB21D1Q8N884 522 aa23.02■■□□□ 1.28
CTNNA1-213ENST00000519113 CDX2Q99626 313 aaPredicted RBP23.02■■□□□ 1.28
CTNNA1-213ENST00000519113 TANGO6Q9C0B7 1094 aa23.02■■□□□ 1.28
CTNNA1-213ENST00000519113 SEMA6BQ9H3T3 888 aa23.02■■□□□ 1.28
CTNNA1-213ENST00000519113 FRMPD3Q5JV73 1810 aa23.02■■□□□ 1.28
CTNNA1-213ENST00000519113 MPHOSPH10O00566 681 aaKnown RBP23.01■■□□□ 1.27
CTNNA1-213ENST00000519113 ERCC3P19447 782 aa23.01■■□□□ 1.27
CTNNA1-213ENST00000519113 GABPAQ06546 454 aa23.01■■□□□ 1.27
CTNNA1-213ENST00000519113 RIOK1Q9BRS2 568 aaKnown RBP23.01■■□□□ 1.27
CTNNA1-213ENST00000519113 MROH8Q9H579 483 aa23.01■■□□□ 1.27
CTNNA1-213ENST00000519113 ANTXR1Q9H6X2 564 aa23.01■■□□□ 1.27
CTNNA1-213ENST00000519113 MYH1P12882 1939 aa23.01■■□□□ 1.27
CTNNA1-213ENST00000519113 MAGEB6P1A0A0J9YX57 407 aa23■■□□□ 1.27
CTNNA1-213ENST00000519113 MYCNP04198 464 aaPredicted RBP23■■□□□ 1.27
CTNNA1-213ENST00000519113 SNX17Q15036 470 aa23■■□□□ 1.27
CTNNA1-213ENST00000519113 TRIM60Q495X7 471 aa23■■□□□ 1.27
CTNNA1-213ENST00000519113 ANO1Q5XXA6 986 aa23■■□□□ 1.27
CTNNA1-213ENST00000519113 ABRAQ8N0Z2 381 aa23■■□□□ 1.27
CTNNA1-213ENST00000519113 BADQ92934 168 aa23■■□□□ 1.27
CTNNA1-213ENST00000519113 CRNKL1Q9BZJ0 848 aaKnown RBP23■■□□□ 1.27
CTNNA1-213ENST00000519113 C1orf115Q9H7X2 142 aa23■■□□□ 1.27
CTNNA1-213ENST00000519113 PRUNE2Q8WUY3 3088 aa23■■□□□ 1.27
CTNNA1-213ENST00000519113 MYO5AQ9Y4I1 1855 aaKnown RBP22.99■■□□□ 1.27
CTNNA1-213ENST00000519113 A0A1W2PRG0 241 aa22.99■■□□□ 1.27
CTNNA1-213ENST00000519113 COBLO75128 1261 aa22.99■■□□□ 1.27
CTNNA1-213ENST00000519113 NEFLP07196 543 aa22.99■■□□□ 1.27
CTNNA1-213ENST00000519113 ADCYAP1R1P41586 468 aa22.99■■□□□ 1.27
CTNNA1-213ENST00000519113 SMAD3P84022 425 aaKnown RBP22.99■■□□□ 1.27
CTNNA1-213ENST00000519113 C9orf50Q5SZB4 431 aa22.99■■□□□ 1.27
CTNNA1-213ENST00000519113 MAFAQ8NHW3 353 aaPredicted RBP22.99■■□□□ 1.27
CTNNA1-213ENST00000519113 MCM9Q9NXL9 1143 aa22.99■■□□□ 1.27
CTNNA1-213ENST00000519113 PLS1Q14651 629 aa22.98■■□□□ 1.27
CTNNA1-213ENST00000519113 LRRC41Q15345 812 aa22.98■■□□□ 1.27
CTNNA1-213ENST00000519113 TTF1Q15361 905 aaPredicted RBP22.98■■□□□ 1.27
CTNNA1-213ENST00000519113 C1orf53Q5VUE5 145 aa22.98■■□□□ 1.27
CTNNA1-213ENST00000519113 PDLIM7Q9NR12 457 aa22.98■■□□□ 1.27
CTNNA1-213ENST00000519113 DSG3P32926 999 aa22.97■■□□□ 1.27
CTNNA1-213ENST00000519113 TMEM179Q6ZVK1 233 aa22.97■■□□□ 1.27
CTNNA1-213ENST00000519113 NCAPG2Q86XI2 1143 aa22.97■■□□□ 1.27
CTNNA1-213ENST00000519113 FTSJ3Q8IY81 847 aaKnown RBP22.97■■□□□ 1.27
CTNNA1-213ENST00000519113 PRAMEF19Q5SWL8 479 aa22.96■■□□□ 1.27
CTNNA1-213ENST00000519113 AACSQ86V21 672 aa22.96■■□□□ 1.27
CTNNA1-213ENST00000519113 ERC1Q8IUD2 1116 aa22.96■■□□□ 1.27
CTNNA1-213ENST00000519113 FERMT2Q96AC1 680 aa22.96■■□□□ 1.27
CTNNA1-213ENST00000519113 SH2D4AQ9H788 454 aa22.96■■□□□ 1.27
CTNNA1-213ENST00000519113 NRBP1Q9UHY1 535 aa22.96■■□□□ 1.27
CTNNA1-213ENST00000519113 SUPT16HQ9Y5B9 1047 aaKnown RBP22.96■■□□□ 1.27
CTNNA1-213ENST00000519113 TACC3Q9Y6A5 838 aa22.96■■□□□ 1.27
CTNNA1-213ENST00000519113 ZNF236Q9UL36 1845 aa22.96■■□□□ 1.27
CTNNA1-213ENST00000519113 TRIM43BA6NCK2 446 aa22.95■■□□□ 1.26
CTNNA1-213ENST00000519113 FLOT1O75955 427 aa22.95■■□□□ 1.26
CTNNA1-213ENST00000519113 FCER1AP12319 257 aa22.95■■□□□ 1.26
CTNNA1-213ENST00000519113 SLC9C2Q5TAH2 1124 aa22.95■■□□□ 1.26
CTNNA1-213ENST00000519113 TRIM43Q96BQ3 446 aaPredicted RBP22.95■■□□□ 1.26
CTNNA1-213ENST00000519113 MAML3Q96JK9 1138 aa22.95■■□□□ 1.26
CTNNA1-213ENST00000519113 SWAP70Q9UH65 585 aa22.95■■□□□ 1.26
CTNNA1-213ENST00000519113 SLC25A27O95847 323 aa22.94■■□□□ 1.26
CTNNA1-213ENST00000519113 PDE6AP16499 860 aa22.94■■□□□ 1.26
CTNNA1-213ENST00000519113 TLE2Q04725 743 aa22.94■■□□□ 1.26
CTNNA1-213ENST00000519113 FAM47AQ5JRC9 791 aa22.94■■□□□ 1.26
CTNNA1-213ENST00000519113 SH3RF1Q7Z6J0 888 aa22.94■■□□□ 1.26
CTNNA1-213ENST00000519113 ITPRIPQ8IWB1 547 aa22.94■■□□□ 1.26
CTNNA1-213ENST00000519113 ARHGEF10LQ9HCE6 1279 aa22.94■■□□□ 1.26
CTNNA1-213ENST00000519113 RLFQ13129 1914 aa22.94■■□□□ 1.26
CTNNA1-213ENST00000519113 LTBP2Q14767 1821 aa22.94■■□□□ 1.26
CTNNA1-213ENST00000519113 RARBP10826 455 aa22.93■■□□□ 1.26
CTNNA1-213ENST00000519113 KIAA1755Q5JYT7 1200 aa22.93■■□□□ 1.26
CTNNA1-213ENST00000519113 MYLIPQ8WY64 445 aa22.93■■□□□ 1.26
CTNNA1-213ENST00000519113 ATG4CQ96DT6 458 aa22.93■■□□□ 1.26
CTNNA1-213ENST00000519113 TTYH1Q9H313 450 aaPredicted RBP22.93■■□□□ 1.26
CTNNA1-213ENST00000519113 DCP1AQ9NPI6 582 aaPredicted RBP22.93■■□□□ 1.26
CTNNA1-213ENST00000519113 XPNPEP3Q9NQH7 507 aa22.93■■□□□ 1.26
CTNNA1-213ENST00000519113 PHF24Q9UPV7 400 aa22.93■■□□□ 1.26
CTNNA1-213ENST00000519113 TMEM265A0A087WTH1 108 aa22.92■■□□□ 1.26
CTNNA1-213ENST00000519113 RNF180Q86T96 592 aa22.92■■□□□ 1.26
CTNNA1-213ENST00000519113 VCPKMTQ9H867 229 aa22.92■■□□□ 1.26
CTNNA1-213ENST00000519113 TMX2Q9Y320 296 aa22.92■■□□□ 1.26
CTNNA1-213ENST00000519113 CDH23Q9H251 3354 aa22.92■■□□□ 1.26
CTNNA1-213ENST00000519113 CLTBP09497 229 aa22.91■■□□□ 1.26
CTNNA1-213ENST00000519113 FOSL2P15408 326 aa22.91■■□□□ 1.26
CTNNA1-213ENST00000519113 EVX2Q03828 476 aa22.91■■□□□ 1.26
CTNNA1-213ENST00000519113 ICA1Q05084 483 aa22.91■■□□□ 1.26
CTNNA1-213ENST00000519113 HSP90AB4PQ58FF6 505 aa22.91■■□□□ 1.26
CTNNA1-213ENST00000519113 SPICE1Q8N0Z3 855 aa22.91■■□□□ 1.26
CTNNA1-213ENST00000519113 SDR42E1Q8WUS8 393 aa22.91■■□□□ 1.26
CTNNA1-213ENST00000519113 RNPC3Q96LT9 517 aaKnown RBP22.91■■□□□ 1.26
CTNNA1-213ENST00000519113 EXOC6BQ9Y2D4 811 aa22.91■■□□□ 1.26
CTNNA1-213ENST00000519113 SPTBN5Q9NRC6 3674 aaKnown RBP22.91■■□□□ 1.26
CTNNA1-213ENST00000519113 ZNF532Q9HCE3 1301 aa22.9■■□□□ 1.26
CTNNA1-213ENST00000519113 WDR46O15213 610 aaKnown RBP22.9■■□□□ 1.26
CTNNA1-213ENST00000519113 TMEM132BQ14DG7 1078 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms