RNA–Protein interactions for RNA: ENST00000518956.1

AP003355.1-201, humanhuman

BASIC

Gene AP003355.1, Length 587 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003355.1-201ENST00000518956 HOXA10P31260 410 aaPredicted RBP7.9□□□□□ -1.14
AP003355.1-201ENST00000518956 GRIK1P39086 918 aa7.9□□□□□ -1.14
AP003355.1-201ENST00000518956 PMS1P54277 932 aaKnown RBP7.9□□□□□ -1.14
AP003355.1-201ENST00000518956 NBPF12Q5TAG4 269 aaPredicted RBP7.9□□□□□ -1.14
AP003355.1-201ENST00000518956 HIRIP3Q9BW71 556 aaPredicted RBP7.9□□□□□ -1.14
AP003355.1-201ENST00000518956 MKRN2Q9H000 416 aaKnown RBP7.9□□□□□ -1.14
AP003355.1-201ENST00000518956 ZC3H7BQ9UGR2 993 aaKnown RBP7.9□□□□□ -1.14
AP003355.1-201ENST00000518956 ZNF214Q9UL59 606 aaPredicted RBP7.9□□□□□ -1.14
AP003355.1-201ENST00000518956 FAM155AB1AL88 458 aaPredicted RBP7.89□□□□□ -1.15
AP003355.1-201ENST00000518956 LRRN2O75325 713 aa7.89□□□□□ -1.15
AP003355.1-201ENST00000518956 BBS9Q3SYG4 887 aa7.89□□□□□ -1.15
AP003355.1-201ENST00000518956 TDRD10Q5VZ19 366 aaKnown RBP7.89□□□□□ -1.15
AP003355.1-201ENST00000518956 LARP1BQ659C4 914 aaKnown RBP7.89□□□□□ -1.15
AP003355.1-201ENST00000518956 NETO1Q8TDF5 533 aa7.89□□□□□ -1.15
AP003355.1-201ENST00000518956 UBXN4Q92575 508 aa7.89□□□□□ -1.15
AP003355.1-201ENST00000518956 USP35Q9P2H5 1018 aa7.89□□□□□ -1.15
AP003355.1-201ENST00000518956 KCNH3Q9ULD8 1083 aa7.89□□□□□ -1.15
AP003355.1-201ENST00000518956 PCDHB10Q9UN67 800 aa7.89□□□□□ -1.15
AP003355.1-201ENST00000518956 CAPN6Q9Y6Q1 641 aa7.89□□□□□ -1.15
AP003355.1-201ENST00000518956 C9IYK1 514 aa7.88□□□□□ -1.15
AP003355.1-201ENST00000518956 KLF4O43474 513 aa7.88□□□□□ -1.15
AP003355.1-201ENST00000518956 COBLO75128 1261 aa7.88□□□□□ -1.15
AP003355.1-201ENST00000518956 TNK2Q07912 1038 aa7.88□□□□□ -1.15
AP003355.1-201ENST00000518956 RBL2Q08999 1139 aa7.88□□□□□ -1.15
AP003355.1-201ENST00000518956 GNPTABQ3T906 1256 aa7.88□□□□□ -1.15
AP003355.1-201ENST00000518956 INTS5Q6P9B9 1019 aaKnown RBP7.88□□□□□ -1.15
AP003355.1-201ENST00000518956 PPFIBP1Q86W92 1011 aa7.88□□□□□ -1.15
AP003355.1-201ENST00000518956 CCDC144CPQ8IYA2 1237 aa7.88□□□□□ -1.15
AP003355.1-201ENST00000518956 PLD6Q8N2A8 252 aaKnown RBP7.88□□□□□ -1.15
AP003355.1-201ENST00000518956 DTWD2Q8NBA8 298 aa7.88□□□□□ -1.15
AP003355.1-201ENST00000518956 SMARCC1Q92922 1105 aaPredicted RBP7.88□□□□□ -1.15
AP003355.1-201ENST00000518956 Q96M66 194 aa7.88□□□□□ -1.15
AP003355.1-201ENST00000518956 DNAJC2Q99543 621 aaKnown RBP7.88□□□□□ -1.15
AP003355.1-201ENST00000518956 TRIM55Q9BYV6 548 aa7.88□□□□□ -1.15
AP003355.1-201ENST00000518956 FAM86C1Q9NVL1 165 aa7.88□□□□□ -1.15
AP003355.1-201ENST00000518956 TP53P04637 393 aaPredicted RBP7.87□□□□□ -1.15
AP003355.1-201ENST00000518956 SLC7A5Q01650 507 aa7.87□□□□□ -1.15
AP003355.1-201ENST00000518956 FXNQ16595 210 aa7.87□□□□□ -1.15
AP003355.1-201ENST00000518956 IFI16Q16666 785 aaKnown RBP7.87□□□□□ -1.15
AP003355.1-201ENST00000518956 NKPD1Q17RQ9 610 aa7.87□□□□□ -1.15
AP003355.1-201ENST00000518956 VHLLQ6RSH7 139 aa7.87□□□□□ -1.15
AP003355.1-201ENST00000518956 SPACA3Q8IXA5 215 aa7.87□□□□□ -1.15
AP003355.1-201ENST00000518956 PIWIL2Q8TC59 973 aaKnown RBP7.87□□□□□ -1.15
AP003355.1-201ENST00000518956 PLAGL2Q9UPG8 496 aa7.87□□□□□ -1.15
AP003355.1-201ENST00000518956 RAB33AQ14088 237 aa7.86□□□□□ -1.15
AP003355.1-201ENST00000518956 NBPF9Q3BBW0 867 aa7.86□□□□□ -1.15
AP003355.1-201ENST00000518956 CDKAL1Q5VV42 579 aa7.86□□□□□ -1.15
AP003355.1-201ENST00000518956 NBPF6Q5VWK0 638 aa7.86□□□□□ -1.15
AP003355.1-201ENST00000518956 NBPF4Q96M43 638 aa7.86□□□□□ -1.15
AP003355.1-201ENST00000518956 TMEM265A0A087WTH1 108 aa7.85□□□□□ -1.15
AP003355.1-201ENST00000518956 DDAH1O94760 285 aa7.85□□□□□ -1.15
AP003355.1-201ENST00000518956 CLCN7P51798 805 aa7.85□□□□□ -1.15
AP003355.1-201ENST00000518956 AUHQ13825 339 aaKnown RBP7.85□□□□□ -1.15
AP003355.1-201ENST00000518956 MSMPQ1L6U9 139 aa7.85□□□□□ -1.15
AP003355.1-201ENST00000518956 AXDND1Q5T1B0 1012 aaPredicted RBP7.85□□□□□ -1.15
AP003355.1-201ENST00000518956 SOGA3Q5TF21 947 aa7.85□□□□□ -1.15
AP003355.1-201ENST00000518956 DCAF15Q66K64 600 aa7.85□□□□□ -1.15
AP003355.1-201ENST00000518956 KIAA1211LQ6NV74 962 aa7.85□□□□□ -1.15
AP003355.1-201ENST00000518956 C6orf15Q6UXA7 325 aaPredicted RBP7.85□□□□□ -1.15
AP003355.1-201ENST00000518956 FAM178BQ8IXR5 827 aa7.85□□□□□ -1.15
AP003355.1-201ENST00000518956 CELF2-AS1Q8N7Q2 184 aa7.85□□□□□ -1.15
AP003355.1-201ENST00000518956 PMFBP1Q8TBY8 1022 aa7.85□□□□□ -1.15
AP003355.1-201ENST00000518956 KLHL6Q8WZ60 621 aa7.85□□□□□ -1.15
AP003355.1-201ENST00000518956 ST7Q9NRC1 585 aa7.85□□□□□ -1.15
AP003355.1-201ENST00000518956 FBXL21Q9UKT6 434 aa7.85□□□□□ -1.15
AP003355.1-201ENST00000518956 ST14Q9Y5Y6 855 aa7.85□□□□□ -1.15
AP003355.1-201ENST00000518956 U2SURPO15042 1029 aaKnown RBP7.84□□□□□ -1.15
AP003355.1-201ENST00000518956 SSTR4P31391 388 aa7.84□□□□□ -1.15
AP003355.1-201ENST00000518956 NCAPHQ15003 741 aa7.84□□□□□ -1.15
AP003355.1-201ENST00000518956 C7orf61Q8IZ16 206 aa7.84□□□□□ -1.15
AP003355.1-201ENST00000518956 MICAL1Q8TDZ2 1067 aa7.84□□□□□ -1.15
AP003355.1-201ENST00000518956 HSPA12BQ96MM6 686 aa7.84□□□□□ -1.15
AP003355.1-201ENST00000518956 ASCC2Q9H1I8 757 aaPredicted RBP7.84□□□□□ -1.15
AP003355.1-201ENST00000518956 PCDHB12Q9Y5F1 795 aa7.84□□□□□ -1.15
AP003355.1-201ENST00000518956 SNX11Q9Y5W9 270 aa7.84□□□□□ -1.15
AP003355.1-201ENST00000518956 B2RBV5 119 aa7.83□□□□□ -1.16
AP003355.1-201ENST00000518956 H3BS24 57 aa7.83□□□□□ -1.16
AP003355.1-201ENST00000518956 MED26O95402 600 aa7.83□□□□□ -1.16
AP003355.1-201ENST00000518956 CD97P48960 835 aa7.83□□□□□ -1.16
AP003355.1-201ENST00000518956 SNW1Q13573 536 aaKnown RBP7.83□□□□□ -1.16
AP003355.1-201ENST00000518956 DDR2Q16832 855 aa7.83□□□□□ -1.16
AP003355.1-201ENST00000518956 HRASLS5Q96KN8 279 aa7.83□□□□□ -1.16
AP003355.1-201ENST00000518956 GPR62Q9BZJ7 368 aa7.83□□□□□ -1.16
AP003355.1-201ENST00000518956 PRDM14Q9GZV8 571 aa7.83□□□□□ -1.16
AP003355.1-201ENST00000518956 BSDC1Q9NW68 430 aaPredicted RBP7.83□□□□□ -1.16
AP003355.1-201ENST00000518956 GJB6O95452 261 aa7.82□□□□□ -1.16
AP003355.1-201ENST00000518956 CLEC16AQ2KHT3 1053 aa7.82□□□□□ -1.16
AP003355.1-201ENST00000518956 ANKRD39Q53RE8 183 aa7.82□□□□□ -1.16
AP003355.1-201ENST00000518956 ZMYM1Q5SVZ6 1142 aa7.82□□□□□ -1.16
AP003355.1-201ENST00000518956 HEATR6Q6AI08 1181 aaKnown RBP7.82□□□□□ -1.16
AP003355.1-201ENST00000518956 TMC3Q7Z5M5 1100 aa7.82□□□□□ -1.16
AP003355.1-201ENST00000518956 HAUS7Q99871 368 aa7.82□□□□□ -1.16
AP003355.1-201ENST00000518956 DUSP15Q9H1R2 295 aaPredicted RBP7.82□□□□□ -1.16
AP003355.1-201ENST00000518956 TRIT1Q9H3H1 467 aaKnown RBP7.82□□□□□ -1.16
AP003355.1-201ENST00000518956 GPATCH2Q9NW75 528 aa7.82□□□□□ -1.16
AP003355.1-201ENST00000518956 SIRPGQ9P1W8 387 aa7.82□□□□□ -1.16
AP003355.1-201ENST00000518956 SHISA3A0PJX4 238 aa7.81□□□□□ -1.16
AP003355.1-201ENST00000518956 SHOXO15266 292 aa7.81□□□□□ -1.16
AP003355.1-201ENST00000518956 CBFA2T2O43439 604 aa7.81□□□□□ -1.16
AP003355.1-201ENST00000518956 SRFP11831 508 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms