RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	COG2	Q14746	738 aa		28.8	■■■□□ 2.2
CNOT7-204	ENST00000518885	NKX2-3	Q8TAU0	364 aa		28.8	■■■□□ 2.2
CNOT7-204	ENST00000518885	RBBP6	Q7Z6E9	1792 aa	Known RBP	28.8	■■■□□ 2.2
CNOT7-204	ENST00000518885	EEF2	P13639	858 aa	Known RBP	28.79	■■■□□ 2.2
CNOT7-204	ENST00000518885	RASA1	P20936	1047 aa		28.79	■■■□□ 2.2
CNOT7-204	ENST00000518885	MCMDC2	Q4G0Z9	681 aa		28.79	■■■□□ 2.2
CNOT7-204	ENST00000518885	PLEKHM2	Q8IWE5	1019 aa		28.79	■■■□□ 2.2
CNOT7-204	ENST00000518885	TXNRD2	Q9NNW7	524 aa		28.79	■■■□□ 2.2
CNOT7-204	ENST00000518885	WDR46	O15213	610 aa	Known RBP	28.78	■■■□□ 2.2
CNOT7-204	ENST00000518885	PPP4R3B	Q5MIZ7	849 aa		28.78	■■■□□ 2.2
CNOT7-204	ENST00000518885	STK11IP	Q8N1F8	1099 aa		28.78	■■■□□ 2.2
CNOT7-204	ENST00000518885	MB21D1	Q8N884	522 aa		28.78	■■■□□ 2.2
CNOT7-204	ENST00000518885	POTEF	A5A3E0	1075 aa		28.77	■■■□□ 2.2
CNOT7-204	ENST00000518885	SMIM22	K7EJ46	135 aa		28.77	■■■□□ 2.2
CNOT7-204	ENST00000518885	HIP1	O00291	1037 aa		28.77	■■■□□ 2.2
CNOT7-204	ENST00000518885	CAPN2	P17655	700 aa		28.77	■■■□□ 2.2
CNOT7-204	ENST00000518885	PPARA	Q07869	468 aa		28.77	■■■□□ 2.2
CNOT7-204	ENST00000518885	NUDT12	Q9BQG2	462 aa		28.77	■■■□□ 2.2
CNOT7-204	ENST00000518885	MYC	P01106	439 aa	Predicted RBP	28.76	■■■□□ 2.19
CNOT7-204	ENST00000518885	TRMT44	Q8IYL2	757 aa	Known RBP	28.76	■■■□□ 2.19
CNOT7-204	ENST00000518885	NYAP2	Q9P242	653 aa		28.76	■■■□□ 2.19
CNOT7-204	ENST00000518885	SPDYE16	A6NNV3	312 aa	Predicted RBP	28.75	■■■□□ 2.19
CNOT7-204	ENST00000518885	IRX6	P78412	446 aa	Predicted RBP	28.75	■■■□□ 2.19
CNOT7-204	ENST00000518885	CCDC129	Q6ZRS4	1044 aa		28.75	■■■□□ 2.19
CNOT7-204	ENST00000518885	PLEKHH3	Q7Z736	793 aa		28.75	■■■□□ 2.19
CNOT7-204	ENST00000518885	CLEC10A	Q8IUN9	316 aa		28.75	■■■□□ 2.19
CNOT7-204	ENST00000518885	SIAH1	Q8IUQ4	282 aa		28.75	■■■□□ 2.19
CNOT7-204	ENST00000518885	SYNPO2	Q9UMS6	1093 aa		28.75	■■■□□ 2.19
CNOT7-204	ENST00000518885	RAD21	O60216	631 aa		28.74	■■■□□ 2.19
CNOT7-204	ENST00000518885	FLOT1	O75955	427 aa		28.74	■■■□□ 2.19
CNOT7-204	ENST00000518885	TSPY3	P0CV98	308 aa		28.74	■■■□□ 2.19
CNOT7-204	ENST00000518885	TSPY8	P0CW00	308 aa		28.74	■■■□□ 2.19
CNOT7-204	ENST00000518885	CCL5	P13501	91 aa		28.74	■■■□□ 2.19
CNOT7-204	ENST00000518885	SPICE1	Q8N0Z3	855 aa		28.74	■■■□□ 2.19
CNOT7-204	ENST00000518885	RNF208	Q9H0X6	261 aa		28.74	■■■□□ 2.19
CNOT7-204	ENST00000518885	IVNS1ABP	Q9Y6Y0	642 aa		28.74	■■■□□ 2.19
CNOT7-204	ENST00000518885	ELN	P15502	786 aa		28.73	■■■□□ 2.19
CNOT7-204	ENST00000518885	ALX1	Q15699	326 aa		28.73	■■■□□ 2.19
CNOT7-204	ENST00000518885	DIAPH3	Q9NSV4	1193 aa		28.73	■■■□□ 2.19
CNOT7-204	ENST00000518885	GJD2	Q9UKL4	321 aa		28.73	■■■□□ 2.19
CNOT7-204	ENST00000518885	PRDM1	O75626	825 aa		28.72	■■■□□ 2.19
CNOT7-204	ENST00000518885	HMGCR	P04035	888 aa		28.72	■■■□□ 2.19
CNOT7-204	ENST00000518885	INHA	P05111	366 aa		28.72	■■■□□ 2.19
CNOT7-204	ENST00000518885	XRCC5	P13010	732 aa	Known RBP	28.72	■■■□□ 2.19
CNOT7-204	ENST00000518885	EN2	P19622	333 aa	Predicted RBP	28.72	■■■□□ 2.19
CNOT7-204	ENST00000518885	RGS2	P41220	211 aa		28.72	■■■□□ 2.19
CNOT7-204	ENST00000518885		Q3C1V9	767 aa		28.72	■■■□□ 2.19
CNOT7-204	ENST00000518885	GPR142	Q7Z601	462 aa		28.72	■■■□□ 2.19
CNOT7-204	ENST00000518885	FAM227B	Q96M60	508 aa		28.72	■■■□□ 2.19
CNOT7-204	ENST00000518885		A0A0D9SFI3	127 aa		28.71	■■■□□ 2.19
CNOT7-204	ENST00000518885	GJB1	P08034	283 aa		28.71	■■■□□ 2.19
CNOT7-204	ENST00000518885	SDS	P20132	328 aa		28.71	■■■□□ 2.19
CNOT7-204	ENST00000518885	DSG3	P32926	999 aa		28.71	■■■□□ 2.19
CNOT7-204	ENST00000518885	NMI	Q13287	307 aa	Predicted RBP	28.71	■■■□□ 2.19
CNOT7-204	ENST00000518885	WDR78	Q5VTH9	848 aa		28.71	■■■□□ 2.19
CNOT7-204	ENST00000518885	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	28.71	■■■□□ 2.19
CNOT7-204	ENST00000518885	PORCN	Q9H237	461 aa		28.71	■■■□□ 2.19
CNOT7-204	ENST00000518885	ZMYM6	O95789	1325 aa		28.7	■■■□□ 2.19
CNOT7-204	ENST00000518885	CCDC171	Q6TFL3	1326 aa		28.7	■■■□□ 2.19
CNOT7-204	ENST00000518885	CNMD	O75829	334 aa		28.7	■■■□□ 2.18
CNOT7-204	ENST00000518885	TTLL1	O95922	423 aa		28.7	■■■□□ 2.18
CNOT7-204	ENST00000518885	MTFR1	Q15390	333 aa		28.7	■■■□□ 2.18
CNOT7-204	ENST00000518885	NEDD1	Q8NHV4	660 aa		28.7	■■■□□ 2.18
CNOT7-204	ENST00000518885	ANAPC4	Q9UJX5	808 aa		28.7	■■■□□ 2.18
CNOT7-204	ENST00000518885	PLIN4	Q96Q06	1357 aa		28.7	■■■□□ 2.18
CNOT7-204	ENST00000518885	MTMR4	Q9NYA4	1195 aa		28.69	■■■□□ 2.18
CNOT7-204	ENST00000518885	BTBD7	Q9P203	1132 aa		28.69	■■■□□ 2.18
CNOT7-204	ENST00000518885	CLIP2	Q9UDT6	1046 aa		28.69	■■■□□ 2.18
CNOT7-204	ENST00000518885	IGKV6D-41	A0A0C4DH26	115 aa		28.68	■■■□□ 2.18
CNOT7-204	ENST00000518885	SLC15A5	A6NIM6	579 aa		28.68	■■■□□ 2.18
CNOT7-204	ENST00000518885	TNRC18	O15417	2968 aa	Predicted RBP	28.68	■■■□□ 2.18
CNOT7-204	ENST00000518885	PEX10	O60683	326 aa		28.68	■■■□□ 2.18
CNOT7-204	ENST00000518885	GJA8	P48165	433 aa		28.68	■■■□□ 2.18
CNOT7-204	ENST00000518885	TFAP4	Q01664	338 aa		28.68	■■■□□ 2.18
CNOT7-204	ENST00000518885	KIAA1755	Q5JYT7	1200 aa		28.68	■■■□□ 2.18
CNOT7-204	ENST00000518885	SHCBP1	Q8NEM2	672 aa		28.68	■■■□□ 2.18
CNOT7-204	ENST00000518885	GREB1L	Q9C091	1923 aa	Predicted RBP	28.68	■■■□□ 2.18
CNOT7-204	ENST00000518885	TSPY2	A6NKD2	308 aa		28.67	■■■□□ 2.18
CNOT7-204	ENST00000518885	HSPD1	P10809	573 aa	Known RBP	28.67	■■■□□ 2.18
CNOT7-204	ENST00000518885	ZKSCAN1	P17029	563 aa	Predicted RBP	28.67	■■■□□ 2.18
CNOT7-204	ENST00000518885	CYP2B6	P20813	491 aa		28.67	■■■□□ 2.18
CNOT7-204	ENST00000518885	VPS53	Q5VIR6	699 aa		28.67	■■■□□ 2.18
CNOT7-204	ENST00000518885	MKL1	Q969V6	931 aa		28.67	■■■□□ 2.18
CNOT7-204	ENST00000518885	CEP95	Q96GE4	821 aa		28.67	■■■□□ 2.18
CNOT7-204	ENST00000518885	APBA2	Q99767	749 aa		28.67	■■■□□ 2.18
CNOT7-204	ENST00000518885	SPATC1L	Q9H0A9	340 aa		28.67	■■■□□ 2.18
CNOT7-204	ENST00000518885		F5H6K3	240 aa		28.66	■■■□□ 2.18
CNOT7-204	ENST00000518885	STRN	O43815	780 aa		28.66	■■■□□ 2.18
CNOT7-204	ENST00000518885	PC	P11498	1178 aa	Known RBP	28.66	■■■□□ 2.18
CNOT7-204	ENST00000518885	KLRC3	Q07444	240 aa		28.66	■■■□□ 2.18
CNOT7-204	ENST00000518885	MAP2K5	Q13163	448 aa		28.66	■■■□□ 2.18
CNOT7-204	ENST00000518885	PLS1	Q14651	629 aa		28.66	■■■□□ 2.18
CNOT7-204	ENST00000518885	MORN1	Q5T089	497 aa		28.66	■■■□□ 2.18
CNOT7-204	ENST00000518885	POTEE	Q6S8J3	1075 aa		28.66	■■■□□ 2.18
CNOT7-204	ENST00000518885	SAMD1	Q6SPF0	538 aa	Predicted RBP	28.66	■■■□□ 2.18
CNOT7-204	ENST00000518885	UNC93B1	Q9H1C4	597 aa		28.66	■■■□□ 2.18
CNOT7-204	ENST00000518885	MROH8	Q9H579	483 aa		28.66	■■■□□ 2.18
CNOT7-204	ENST00000518885	FOXP2	O15409	715 aa		28.65	■■■□□ 2.18
CNOT7-204	ENST00000518885	FGA	P02671	866 aa		28.65	■■■□□ 2.18
CNOT7-204	ENST00000518885	PTPRE	P23469	700 aa		28.65	■■■□□ 2.18

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms