RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 TTC16Q8NEE8 873 aa8.49□□□□□ -1.05
CCDC6-203ENST00000518638 ELP3Q9H9T3 547 aa8.49□□□□□ -1.05
CCDC6-203ENST00000518638 ABI2Q9NYB9 513 aaPredicted RBP8.49□□□□□ -1.05
CCDC6-203ENST00000518638 BIN2Q9UBW5 565 aaPredicted RBP8.49□□□□□ -1.05
CCDC6-203ENST00000518638 COL5A3P25940 1745 aaPredicted RBP8.49□□□□□ -1.05
CCDC6-203ENST00000518638 A6NHS1 94 aa8.48□□□□□ -1.05
CCDC6-203ENST00000518638 PSAPP07602 524 aa8.48□□□□□ -1.05
CCDC6-203ENST00000518638 LMNB1P20700 586 aa8.48□□□□□ -1.05
CCDC6-203ENST00000518638 NRLP54845 237 aa8.48□□□□□ -1.05
CCDC6-203ENST00000518638 SLC12A5Q9H2X9 1139 aa8.48□□□□□ -1.05
CCDC6-203ENST00000518638 CNTNAP4Q9C0A0 1308 aa8.48□□□□□ -1.05
CCDC6-203ENST00000518638 DHX15O43143 795 aaKnown RBP8.47□□□□□ -1.05
CCDC6-203ENST00000518638 GYS1P13807 737 aa8.47□□□□□ -1.05
CCDC6-203ENST00000518638 KCNA3P22001 575 aa8.47□□□□□ -1.05
CCDC6-203ENST00000518638 DTX1Q86Y01 620 aa8.47□□□□□ -1.05
CCDC6-203ENST00000518638 MAP4K3Q8IVH8 894 aa8.47□□□□□ -1.05
CCDC6-203ENST00000518638 USHBP1Q8N6Y0 703 aa8.47□□□□□ -1.05
CCDC6-203ENST00000518638 OR13H1Q8NG92 308 aa8.47□□□□□ -1.05
CCDC6-203ENST00000518638 CITED4Q96RK1 184 aa8.47□□□□□ -1.05
CCDC6-203ENST00000518638 TMEM63CQ9P1W3 806 aa8.47□□□□□ -1.05
CCDC6-203ENST00000518638 KDRP35968 1356 aa8.47□□□□□ -1.05
CCDC6-203ENST00000518638 NCAPD2Q15021 1401 aa8.46□□□□□ -1.05
CCDC6-203ENST00000518638 RPS6KA4O75676 772 aa8.46□□□□□ -1.06
CCDC6-203ENST00000518638 WNT11O96014 354 aa8.46□□□□□ -1.06
CCDC6-203ENST00000518638 EIF2AK2P19525 551 aaKnown RBP8.46□□□□□ -1.06
CCDC6-203ENST00000518638 ITPK1Q13572 414 aa8.46□□□□□ -1.06
CCDC6-203ENST00000518638 TTC39BQ5VTQ0 682 aaPredicted RBP8.46□□□□□ -1.06
CCDC6-203ENST00000518638 SMIM5Q71RC9 77 aa8.46□□□□□ -1.06
CCDC6-203ENST00000518638 AGGF1Q8N302 714 aaeCLIP8.46□□□□□ -1.06
CCDC6-203ENST00000518638 FAM129BQ96TA1 746 aa8.46□□□□□ -1.06
CCDC6-203ENST00000518638 CNTNAP1P78357 1384 aa8.46□□□□□ -1.06
CCDC6-203ENST00000518638 DLEC1Q9Y238 1755 aa8.45□□□□□ -1.06
CCDC6-203ENST00000518638 FOXN1O15353 648 aa8.45□□□□□ -1.06
CCDC6-203ENST00000518638 NFIAQ12857 509 aa8.45□□□□□ -1.06
CCDC6-203ENST00000518638 RRS1Q15050 365 aaKnown RBP8.45□□□□□ -1.06
CCDC6-203ENST00000518638 IFNL2Q8IZJ0 200 aa8.45□□□□□ -1.06
CCDC6-203ENST00000518638 RBCK1Q9BYM8 510 aa8.45□□□□□ -1.06
CCDC6-203ENST00000518638 ADGRE2Q9UHX3 823 aa8.45□□□□□ -1.06
CCDC6-203ENST00000518638 DCTN4Q9UJW0 460 aa8.45□□□□□ -1.06
CCDC6-203ENST00000518638 ASAP1Q9ULH1 1129 aa8.45□□□□□ -1.06
CCDC6-203ENST00000518638 PCNTO95613 3336 aa8.45□□□□□ -1.06
CCDC6-203ENST00000518638 KIF20BQ96Q89 1820 aa8.45□□□□□ -1.06
CCDC6-203ENST00000518638 HSP90AB1P08238 724 aaKnown RBP8.44□□□□□ -1.06
CCDC6-203ENST00000518638 SNX29Q8TEQ0 813 aa8.44□□□□□ -1.06
CCDC6-203ENST00000518638 ABHD8Q96I13 439 aa8.44□□□□□ -1.06
CCDC6-203ENST00000518638 CARD11Q9BXL7 1154 aa8.44□□□□□ -1.06
CCDC6-203ENST00000518638 KRTAP4-2Q9BYR5 136 aa8.44□□□□□ -1.06
CCDC6-203ENST00000518638 TONSLQ96HA7 1378 aa8.44□□□□□ -1.06
CCDC6-203ENST00000518638 ANKRD26Q9UPS8 1709 aa8.43□□□□□ -1.06
CCDC6-203ENST00000518638 CCDC88AQ3V6T2 1871 aa8.43□□□□□ -1.06
CCDC6-203ENST00000518638 DICER1Q9UPY3 1922 aaKnown RBP8.43□□□□□ -1.06
CCDC6-203ENST00000518638 TNFRSF21O75509 655 aa8.43□□□□□ -1.06
CCDC6-203ENST00000518638 KIF4AO95239 1232 aa8.43□□□□□ -1.06
CCDC6-203ENST00000518638 MAP2K1Q02750 393 aaPredicted RBP8.43□□□□□ -1.06
CCDC6-203ENST00000518638 HFE2Q6ZVN8 426 aa8.43□□□□□ -1.06
CCDC6-203ENST00000518638 SND1Q7KZF4 910 aaKnown RBP eCLIP8.43□□□□□ -1.06
CCDC6-203ENST00000518638 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.43□□□□□ -1.06
CCDC6-203ENST00000518638 PLD4Q96BZ4 506 aa8.43□□□□□ -1.06
CCDC6-203ENST00000518638 NSUN5Q96P11 429 aaKnown RBP8.43□□□□□ -1.06
CCDC6-203ENST00000518638 UBL7Q96S82 380 aaPredicted RBP8.43□□□□□ -1.06
CCDC6-203ENST00000518638 CHRDQ9H2X0 955 aa8.43□□□□□ -1.06
CCDC6-203ENST00000518638 ATG3Q9NT62 314 aa8.43□□□□□ -1.06
CCDC6-203ENST00000518638 CNTN3Q9P232 1028 aa8.43□□□□□ -1.06
CCDC6-203ENST00000518638 USP42Q9H9J4 1324 aaKnown RBP8.43□□□□□ -1.06
CCDC6-203ENST00000518638 VIRMAQ69YN4 1812 aaKnown RBP8.43□□□□□ -1.06
CCDC6-203ENST00000518638 IQCA1LA6NCM1 817 aa8.42□□□□□ -1.06
CCDC6-203ENST00000518638 ERVV-2B6SEH9 535 aa8.42□□□□□ -1.06
CCDC6-203ENST00000518638 IGHA2P01877 340 aa8.42□□□□□ -1.06
CCDC6-203ENST00000518638 CYP2E1P05181 493 aaPredicted RBP8.42□□□□□ -1.06
CCDC6-203ENST00000518638 PHKG2P15735 406 aa8.42□□□□□ -1.06
CCDC6-203ENST00000518638 RGS19P49795 217 aa8.42□□□□□ -1.06
CCDC6-203ENST00000518638 HYAL2Q12891 473 aa8.42□□□□□ -1.06
CCDC6-203ENST00000518638 SETDB1Q15047 1291 aa8.42□□□□□ -1.06
CCDC6-203ENST00000518638 HSP90AB2PQ58FF8 381 aa8.42□□□□□ -1.06
CCDC6-203ENST00000518638 IL22RA1Q8N6P7 574 aa8.42□□□□□ -1.06
CCDC6-203ENST00000518638 TTLL6Q8N841 843 aa8.42□□□□□ -1.06
CCDC6-203ENST00000518638 C1orf127Q8N9H9 656 aa8.42□□□□□ -1.06
CCDC6-203ENST00000518638 DBNDD2Q9BQY9 259 aa8.42□□□□□ -1.06
CCDC6-203ENST00000518638 CEP41Q9BYV8 373 aa8.42□□□□□ -1.06
CCDC6-203ENST00000518638 SCN4AP35499 1836 aa8.41□□□□□ -1.06
CCDC6-203ENST00000518638 MAPK1P28482 360 aa8.41□□□□□ -1.06
CCDC6-203ENST00000518638 LBX1P52954 281 aa8.41□□□□□ -1.06
CCDC6-203ENST00000518638 UVSSAQ2YD98 709 aa8.41□□□□□ -1.06
CCDC6-203ENST00000518638 RNF43Q68DV7 783 aa8.41□□□□□ -1.06
CCDC6-203ENST00000518638 GDF6Q6KF10 455 aaPredicted RBP8.41□□□□□ -1.06
CCDC6-203ENST00000518638 PMEPA1Q969W9 287 aa8.41□□□□□ -1.06
CCDC6-203ENST00000518638 DMRTB1Q96MA1 342 aa8.41□□□□□ -1.06
CCDC6-203ENST00000518638 FOXD3Q9UJU5 478 aaPredicted RBP8.41□□□□□ -1.06
CCDC6-203ENST00000518638 MYH14Q7Z406 1995 aaKnown RBP8.41□□□□□ -1.06
CCDC6-203ENST00000518638 NRXN2Q9P2S2 1712 aa8.4□□□□□ -1.06
CCDC6-203ENST00000518638 POLRMTO00411 1230 aaKnown RBP8.4□□□□□ -1.06
CCDC6-203ENST00000518638 FYB1O15117 783 aa8.4□□□□□ -1.06
CCDC6-203ENST00000518638 GPR182O15218 404 aa8.4□□□□□ -1.06
CCDC6-203ENST00000518638 PHACTR2O75167 634 aa8.4□□□□□ -1.06
CCDC6-203ENST00000518638 FBLN1P23142 703 aa8.4□□□□□ -1.06
CCDC6-203ENST00000518638 CHRNA5P30532 468 aa8.4□□□□□ -1.06
CCDC6-203ENST00000518638 OGFOD2Q6N063 350 aa8.4□□□□□ -1.06
CCDC6-203ENST00000518638 LDHDQ86WU2 507 aa8.4□□□□□ -1.06
CCDC6-203ENST00000518638 ARMC10Q8N2F6 343 aa8.4□□□□□ -1.06
CCDC6-203ENST00000518638 UTP4Q969X6 686 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms