RNA–Protein interactions for RNA: ENST00000518560.1

TTC1-202, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 5

Gene TTC1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-202ENST00000518560 MAPKAPK5Q8IW41 473 aa11.8□□□□□ -0.52
TTC1-202ENST00000518560 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.8□□□□□ -0.52
TTC1-202ENST00000518560 TRIM75PA6NK02 468 aa11.79□□□□□ -0.52
TTC1-202ENST00000518560 MAP3K10Q02779 954 aa11.79□□□□□ -0.52
TTC1-202ENST00000518560 C20orf194Q5TEA3 1177 aa11.79□□□□□ -0.52
TTC1-202ENST00000518560 C17orf99Q6UX52 265 aa11.79□□□□□ -0.52
TTC1-202ENST00000518560 AACSQ86V21 672 aa11.79□□□□□ -0.52
TTC1-202ENST00000518560 SIRT2Q8IXJ6 389 aa11.79□□□□□ -0.52
TTC1-202ENST00000518560 TGFBRAP1Q8WUH2 860 aa11.79□□□□□ -0.52
TTC1-202ENST00000518560 ZCCHC17Q9NP64 241 aaKnown RBP11.79□□□□□ -0.52
TTC1-202ENST00000518560 PICK1Q9NRD5 415 aa11.79□□□□□ -0.52
TTC1-202ENST00000518560 AFG3L2Q9Y4W6 797 aa11.79□□□□□ -0.52
TTC1-202ENST00000518560 MYH7P12883 1935 aa11.79□□□□□ -0.52
TTC1-202ENST00000518560 KIAA0100Q14667 2235 aaKnown RBP11.79□□□□□ -0.52
TTC1-202ENST00000518560 DOCK3Q8IZD9 2030 aa11.78□□□□□ -0.52
TTC1-202ENST00000518560 A0A0G2JLL6 359 aaPredicted RBP11.78□□□□□ -0.52
TTC1-202ENST00000518560 TTC24A2A3L6 582 aaPredicted RBP11.78□□□□□ -0.52
TTC1-202ENST00000518560 WIPF1O43516 503 aa11.78□□□□□ -0.52
TTC1-202ENST00000518560 IDH1O75874 414 aaKnown RBP11.78□□□□□ -0.52
TTC1-202ENST00000518560 OATP04181 439 aa11.78□□□□□ -0.52
TTC1-202ENST00000518560 CYP7A1P22680 504 aa11.78□□□□□ -0.52
TTC1-202ENST00000518560 JAG1P78504 1218 aa11.78□□□□□ -0.52
TTC1-202ENST00000518560 PRRT2Q7Z6L0 340 aaPredicted RBP11.78□□□□□ -0.52
TTC1-202ENST00000518560 MIGA1Q8NAN2 632 aa11.78□□□□□ -0.52
TTC1-202ENST00000518560 SH3TC2Q8TF17 1288 aa11.78□□□□□ -0.52
TTC1-202ENST00000518560 NOL10Q9BSC4 688 aaKnown RBP11.78□□□□□ -0.52
TTC1-202ENST00000518560 DNAJC18Q9H819 358 aa11.78□□□□□ -0.52
TTC1-202ENST00000518560 SAP30BPQ9UHR5 308 aaKnown RBP11.78□□□□□ -0.52
TTC1-202ENST00000518560 RCAN3Q9UKA8 241 aa11.78□□□□□ -0.52
TTC1-202ENST00000518560 FCF1Q9Y324 198 aaKnown RBP11.78□□□□□ -0.52
TTC1-202ENST00000518560 FLT1P17948 1338 aa11.78□□□□□ -0.52
TTC1-202ENST00000518560 CXCL11O14625 94 aa11.77□□□□□ -0.53
TTC1-202ENST00000518560 CTNND1O60716 968 aaKnown RBP11.77□□□□□ -0.53
TTC1-202ENST00000518560 SMCPP49901 116 aaPredicted RBP11.77□□□□□ -0.53
TTC1-202ENST00000518560 NFX1Q12986 1120 aaKnown RBP11.77□□□□□ -0.53
TTC1-202ENST00000518560 TREML2Q5T2D2 321 aa11.77□□□□□ -0.53
TTC1-202ENST00000518560 RHPN1Q8TCX5 695 aa11.77□□□□□ -0.53
TTC1-202ENST00000518560 ARMC5Q96C12 935 aa11.77□□□□□ -0.53
TTC1-202ENST00000518560 ZNF512BQ96KM6 892 aaPredicted RBP11.77□□□□□ -0.53
TTC1-202ENST00000518560 TRIM47Q96LD4 638 aa11.77□□□□□ -0.53
TTC1-202ENST00000518560 PALD1Q9ULE6 856 aa11.77□□□□□ -0.53
TTC1-202ENST00000518560 CENPFP49454 3210 aa11.77□□□□□ -0.53
TTC1-202ENST00000518560 MYH8P13535 1937 aa11.76□□□□□ -0.53
TTC1-202ENST00000518560 BAZ2AQ9UIF9 1905 aaKnown RBP11.76□□□□□ -0.53
TTC1-202ENST00000518560 GDF11O95390 407 aa11.76□□□□□ -0.53
TTC1-202ENST00000518560 BCRP11274 1271 aa11.76□□□□□ -0.53
TTC1-202ENST00000518560 EN2P19622 333 aaPredicted RBP11.76□□□□□ -0.53
TTC1-202ENST00000518560 PSMC4P43686 418 aa11.76□□□□□ -0.53
TTC1-202ENST00000518560 KIF22Q14807 665 aa11.76□□□□□ -0.53
TTC1-202ENST00000518560 SLC9C1Q4G0N8 1177 aa11.76□□□□□ -0.53
TTC1-202ENST00000518560 MAGEB6Q8N7X4 407 aa11.76□□□□□ -0.53
TTC1-202ENST00000518560 EDC3Q96F86 508 aaKnown RBP11.76□□□□□ -0.53
TTC1-202ENST00000518560 ZNF333Q96JL9 665 aa11.76□□□□□ -0.53
TTC1-202ENST00000518560 PARK7Q99497 189 aaKnown RBP11.76□□□□□ -0.53
TTC1-202ENST00000518560 ZBTB40Q9NUA8 1239 aa11.76□□□□□ -0.53
TTC1-202ENST00000518560 PLXNB2O15031 1838 aa11.75□□□□□ -0.53
TTC1-202ENST00000518560 ZBTB24O43167 697 aaPredicted RBP11.75□□□□□ -0.53
TTC1-202ENST00000518560 BAG3O95817 575 aa11.75□□□□□ -0.53
TTC1-202ENST00000518560 CAP2P40123 477 aa11.75□□□□□ -0.53
TTC1-202ENST00000518560 HMGCS2P54868 508 aa11.75□□□□□ -0.53
TTC1-202ENST00000518560 SPP2Q13103 211 aa11.75□□□□□ -0.53
TTC1-202ENST00000518560 ERC1Q8IUD2 1116 aa11.75□□□□□ -0.53
TTC1-202ENST00000518560 DDX19BQ9UMR2 479 aa11.75□□□□□ -0.53
TTC1-202ENST00000518560 GABRQQ9UN88 632 aa11.75□□□□□ -0.53
TTC1-202ENST00000518560 PEX10O60683 326 aa11.74□□□□□ -0.53
TTC1-202ENST00000518560 FMNL1O95466 1100 aaPredicted RBP11.74□□□□□ -0.53
TTC1-202ENST00000518560 MAP4K4O95819 1239 aaPredicted RBP11.74□□□□□ -0.53
TTC1-202ENST00000518560 SLFNL1Q499Z3 407 aa11.74□□□□□ -0.53
TTC1-202ENST00000518560 DNAJC2Q99543 621 aaKnown RBP11.74□□□□□ -0.53
TTC1-202ENST00000518560 AGTPBP1Q9UPW5 1226 aa11.74□□□□□ -0.53
TTC1-202ENST00000518560 MS4A1P11836 297 aa11.73□□□□□ -0.53
TTC1-202ENST00000518560 PRKCZQ05513 592 aa11.73□□□□□ -0.53
TTC1-202ENST00000518560 MTFR1Q15390 333 aa11.73□□□□□ -0.53
TTC1-202ENST00000518560 FASTKD5Q7L8L6 764 aaKnown RBP11.73□□□□□ -0.53
TTC1-202ENST00000518560 MYPNQ86TC9 1320 aa11.73□□□□□ -0.53
TTC1-202ENST00000518560 ZNF280CQ8ND82 737 aa11.73□□□□□ -0.53
TTC1-202ENST00000518560 PI4KBQ9UBF8 816 aa11.73□□□□□ -0.53
TTC1-202ENST00000518560 SRRDQ9UH36 339 aa11.73□□□□□ -0.53
TTC1-202ENST00000518560 HERC5Q9UII4 1024 aaKnown RBP11.73□□□□□ -0.53
TTC1-202ENST00000518560 USP17L5A8MUK1 530 aa11.72□□□□□ -0.53
TTC1-202ENST00000518560 GOLIM4O00461 696 aa11.72□□□□□ -0.53
TTC1-202ENST00000518560 SMARCA5O60264 1052 aaPredicted RBP11.72□□□□□ -0.53
TTC1-202ENST00000518560 CHGBP05060 677 aa11.72□□□□□ -0.53
TTC1-202ENST00000518560 USP5P45974 858 aa11.72□□□□□ -0.53
TTC1-202ENST00000518560 MTMR2Q13614 643 aa11.72□□□□□ -0.53
TTC1-202ENST00000518560 ARHGEF6Q15052 776 aa11.72□□□□□ -0.53
TTC1-202ENST00000518560 HSP90AB4PQ58FF6 505 aa11.72□□□□□ -0.53
TTC1-202ENST00000518560 RPAP2Q8IXW5 612 aaPredicted RBP11.72□□□□□ -0.53
TTC1-202ENST00000518560 CLASRPQ8N2M8 674 aaKnown RBP11.72□□□□□ -0.53
TTC1-202ENST00000518560 CRACR2BQ8N4Y2 399 aaPredicted RBP11.72□□□□□ -0.53
TTC1-202ENST00000518560 ANKRD13CQ8N6S4 541 aa11.72□□□□□ -0.53
TTC1-202ENST00000518560 PXYLP1Q8TE99 480 aa11.72□□□□□ -0.53
TTC1-202ENST00000518560 SMCR8Q8TEV9 937 aaPredicted RBP11.72□□□□□ -0.53
TTC1-202ENST00000518560 KIF1BPQ96EK5 621 aa11.72□□□□□ -0.53
TTC1-202ENST00000518560 DHX36Q9H2U1 1008 aaKnown RBP11.72□□□□□ -0.53
TTC1-202ENST00000518560 BRCA2P51587 3418 aa11.71□□□□□ -0.53
TTC1-202ENST00000518560 HMMRO75330 724 aa11.71□□□□□ -0.53
TTC1-202ENST00000518560 IFIT2P09913 472 aaKnown RBP11.71□□□□□ -0.53
TTC1-202ENST00000518560 PDE6AP16499 860 aa11.71□□□□□ -0.53
TTC1-202ENST00000518560 FCGRTP55899 365 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms