RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 TCP10L2B9ZVM9 353 aa27.01■■□□□ 1.91
SLIT3-204ENST00000518140 TOP1P11387 765 aaKnown RBP27.01■■□□□ 1.91
SLIT3-204ENST00000518140 ZNF445P59923 1031 aa27.01■■□□□ 1.91
SLIT3-204ENST00000518140 DIS3L2Q8IYB7 885 aaKnown RBP27.01■■□□□ 1.91
SLIT3-204ENST00000518140 AGBL3Q8NEM8 1001 aa27.01■■□□□ 1.91
SLIT3-204ENST00000518140 HDAC9Q9UKV0 1011 aa27.01■■□□□ 1.91
SLIT3-204ENST00000518140 PLIN4Q96Q06 1357 aa27■■□□□ 1.91
SLIT3-204ENST00000518140 GNL2Q13823 731 aaKnown RBP27■■□□□ 1.91
SLIT3-204ENST00000518140 CIAPIN1Q6FI81 312 aa27■■□□□ 1.91
SLIT3-204ENST00000518140 CPVLQ9H3G5 476 aa27■■□□□ 1.91
SLIT3-204ENST00000518140 ZNF70Q9UC06 446 aaPredicted RBP27■■□□□ 1.91
SLIT3-204ENST00000518140 PALM3A6NDB9 673 aaPredicted RBP26.99■■□□□ 1.91
SLIT3-204ENST00000518140 NR5A1Q13285 461 aa26.99■■□□□ 1.91
SLIT3-204ENST00000518140 USP17L2Q6R6M4 530 aa26.99■■□□□ 1.91
SLIT3-204ENST00000518140 SIPA1L1O43166 1804 aa26.99■■□□□ 1.91
SLIT3-204ENST00000518140 MPHOSPH10O00566 681 aaKnown RBP26.99■■□□□ 1.91
SLIT3-204ENST00000518140 CYTH3O43739 400 aa26.99■■□□□ 1.91
SLIT3-204ENST00000518140 ENTPD3O75355 529 aa26.99■■□□□ 1.91
SLIT3-204ENST00000518140 GOLGA6L4A6NEF3 574 aa26.98■■□□□ 1.91
SLIT3-204ENST00000518140 LRRC47Q8N1G4 583 aaKnown RBP26.98■■□□□ 1.91
SLIT3-204ENST00000518140 LINC00301Q8NCQ3 95 aa26.98■■□□□ 1.91
SLIT3-204ENST00000518140 CLIP2Q9UDT6 1046 aa26.98■■□□□ 1.91
SLIT3-204ENST00000518140 MYH6P13533 1939 aa26.97■■□□□ 1.91
SLIT3-204ENST00000518140 SRCAPQ6ZRS2 3230 aa26.97■■□□□ 1.91
SLIT3-204ENST00000518140 USP17L5A8MUK1 530 aa26.97■■□□□ 1.91
SLIT3-204ENST00000518140 NOSTRINQ8IVI9 506 aa26.97■■□□□ 1.91
SLIT3-204ENST00000518140 PHF20Q9BVI0 1012 aa26.97■■□□□ 1.91
SLIT3-204ENST00000518140 SAFBQ15424 915 aaKnown RBP eCLIP26.96■■□□□ 1.91
SLIT3-204ENST00000518140 FOXP4Q8IVH2 680 aaPredicted RBP26.96■■□□□ 1.91
SLIT3-204ENST00000518140 POLR3EQ9NVU0 708 aa26.96■■□□□ 1.91
SLIT3-204ENST00000518140 KLRF2D3W0D1 207 aa26.96■■□□□ 1.91
SLIT3-204ENST00000518140 SCG2P13521 617 aa26.96■■□□□ 1.91
SLIT3-204ENST00000518140 NASPP49321 788 aaPredicted RBP26.96■■□□□ 1.91
SLIT3-204ENST00000518140 PFKFB3Q16875 520 aaPredicted RBP26.96■■□□□ 1.91
SLIT3-204ENST00000518140 ANO1Q5XXA6 986 aa26.96■■□□□ 1.91
SLIT3-204ENST00000518140 SYAP1Q96A49 352 aaPredicted RBP26.96■■□□□ 1.91
SLIT3-204ENST00000518140 SPDYE2Q495Y8 402 aa26.95■■□□□ 1.9
SLIT3-204ENST00000518140 CERKLQ49MI3 558 aaPredicted RBP26.95■■□□□ 1.9
SLIT3-204ENST00000518140 CCDC183Q5T5S1 534 aa26.95■■□□□ 1.9
SLIT3-204ENST00000518140 ATRNL1Q5VV63 1379 aa26.95■■□□□ 1.9
SLIT3-204ENST00000518140 TATDN1Q6P1N9 297 aa26.95■■□□□ 1.9
SLIT3-204ENST00000518140 FOXP1Q9H334 677 aaPredicted RBP26.95■■□□□ 1.9
SLIT3-204ENST00000518140 ADAMTS3O15072 1205 aa26.94■■□□□ 1.9
SLIT3-204ENST00000518140 TTLL1O95922 423 aa26.94■■□□□ 1.9
SLIT3-204ENST00000518140 ME1P48163 572 aa26.94■■□□□ 1.9
SLIT3-204ENST00000518140 GNAQP50148 359 aa26.94■■□□□ 1.9
SLIT3-204ENST00000518140 NPY5RQ15761 445 aa26.94■■□□□ 1.9
SLIT3-204ENST00000518140 NBPF9Q3BBW0 867 aa26.94■■□□□ 1.9
SLIT3-204ENST00000518140 METTL16Q86W50 562 aaKnown RBP26.94■■□□□ 1.9
SLIT3-204ENST00000518140 CSRNP1Q96S65 589 aa26.94■■□□□ 1.9
SLIT3-204ENST00000518140 PCDHA7Q9UN72 937 aa26.94■■□□□ 1.9
SLIT3-204ENST00000518140 CNTNAP1P78357 1384 aa26.94■■□□□ 1.9
SLIT3-204ENST00000518140 PARP1P09874 1014 aaKnown RBP26.94■■□□□ 1.9
SLIT3-204ENST00000518140 TOB1P50616 345 aaPredicted RBP26.94■■□□□ 1.9
SLIT3-204ENST00000518140 JAG1P78504 1218 aa26.94■■□□□ 1.9
SLIT3-204ENST00000518140 RRP1BQ14684 758 aaKnown RBP26.94■■□□□ 1.9
SLIT3-204ENST00000518140 STK38Q15208 465 aa26.94■■□□□ 1.9
SLIT3-204ENST00000518140 SF3A1Q15459 793 aaKnown RBP26.94■■□□□ 1.9
SLIT3-204ENST00000518140 CDAN1Q8IWY9 1227 aa26.94■■□□□ 1.9
SLIT3-204ENST00000518140 BICD2Q8TD16 824 aa26.94■■□□□ 1.9
SLIT3-204ENST00000518140 ZBED3Q96IU2 234 aaPredicted RBP26.94■■□□□ 1.9
SLIT3-204ENST00000518140 CCDC17Q96LX7 622 aa26.94■■□□□ 1.9
SLIT3-204ENST00000518140 VEZTQ9HBM0 779 aa26.94■■□□□ 1.9
SLIT3-204ENST00000518140 TMOD2Q9NZR1 351 aa26.94■■□□□ 1.9
SLIT3-204ENST00000518140 LTBP3Q9NS15 1303 aa26.93■■□□□ 1.9
SLIT3-204ENST00000518140 EGFRP00533 1210 aa26.93■■□□□ 1.9
SLIT3-204ENST00000518140 ATP2B2Q01814 1243 aa26.93■■□□□ 1.9
SLIT3-204ENST00000518140 EARS2Q5JPH6 523 aaKnown RBP26.93■■□□□ 1.9
SLIT3-204ENST00000518140 MTMR14Q8NCE2 650 aa26.93■■□□□ 1.9
SLIT3-204ENST00000518140 GPKOWQ92917 476 aaPredicted RBP eCLIP26.93■■□□□ 1.9
SLIT3-204ENST00000518140 DACT1Q9NYF0 836 aa26.93■■□□□ 1.9
SLIT3-204ENST00000518140 MYH8P13535 1937 aa26.93■■□□□ 1.9
SLIT3-204ENST00000518140 FAM205CA6NFA0 338 aa26.93■■□□□ 1.9
SLIT3-204ENST00000518140 NR1I2O75469 434 aa26.93■■□□□ 1.9
SLIT3-204ENST00000518140 PDHBP11177 359 aa26.93■■□□□ 1.9
SLIT3-204ENST00000518140 XBP1P17861 261 aa26.93■■□□□ 1.9
SLIT3-204ENST00000518140 TNIP1Q15025 636 aa26.93■■□□□ 1.9
SLIT3-204ENST00000518140 TRIM34Q9BYJ4 488 aa26.93■■□□□ 1.9
SLIT3-204ENST00000518140 SCAF8Q9UPN6 1271 aaKnown RBP26.93■■□□□ 1.9
SLIT3-204ENST00000518140 FRMPD2Q68DX3 1309 aaPredicted RBP26.92■■□□□ 1.9
SLIT3-204ENST00000518140 WNT10BO00744 389 aa26.92■■□□□ 1.9
SLIT3-204ENST00000518140 GDF11O95390 407 aa26.92■■□□□ 1.9
SLIT3-204ENST00000518140 YEATS4O95619 227 aa26.92■■□□□ 1.9
SLIT3-204ENST00000518140 NOM1Q5C9Z4 860 aaKnown RBP26.92■■□□□ 1.9
SLIT3-204ENST00000518140 UBA5Q9GZZ9 404 aa26.92■■□□□ 1.9
SLIT3-204ENST00000518140 GOLPH3LQ9H4A5 285 aa26.92■■□□□ 1.9
SLIT3-204ENST00000518140 SPON1Q9HCB6 807 aa26.92■■□□□ 1.9
SLIT3-204ENST00000518140 MYOZ2Q9NPC6 264 aa26.92■■□□□ 1.9
SLIT3-204ENST00000518140 SPTLC2O15270 562 aa26.91■■□□□ 1.9
SLIT3-204ENST00000518140 LRSAM1Q6UWE0 723 aa26.91■■□□□ 1.9
SLIT3-204ENST00000518140 PTPAQ15257 358 aa26.91■■□□□ 1.9
SLIT3-204ENST00000518140 RBM26Q5T8P6 1007 aaKnown RBP26.91■■□□□ 1.9
SLIT3-204ENST00000518140 TYW1BQ6NUM6 668 aa26.91■■□□□ 1.9
SLIT3-204ENST00000518140 SIAH1Q8IUQ4 282 aa26.91■■□□□ 1.9
SLIT3-204ENST00000518140 CCAR1Q8IX12 1150 aaKnown RBP26.91■■□□□ 1.9
SLIT3-204ENST00000518140 FAM151AQ8WW52 585 aa26.91■■□□□ 1.9
SLIT3-204ENST00000518140 CABP5Q9NP86 173 aa26.91■■□□□ 1.9
SLIT3-204ENST00000518140 MARCKSP29966 332 aaPredicted RBP26.9■■□□□ 1.9
SLIT3-204ENST00000518140 SEPT2Q15019 361 aa26.9■■□□□ 1.9
SLIT3-204ENST00000518140 SLC39A14Q15043 492 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms