RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 BRI3BPQ8WY22 251 aa11.63□□□□□ -0.55
CLN8-202ENST00000517514 MTA3Q9BTC8 594 aa11.63□□□□□ -0.55
CLN8-202ENST00000517514 ALDH8A1Q9H2A2 487 aaPredicted RBP11.63□□□□□ -0.55
CLN8-202ENST00000517514 BRPF3Q9ULD4 1205 aa11.63□□□□□ -0.55
CLN8-202ENST00000517514 STX8Q9UNK0 236 aa11.63□□□□□ -0.55
CLN8-202ENST00000517514 TESPA1A2RU30 521 aaPredicted RBP11.62□□□□□ -0.55
CLN8-202ENST00000517514 USP17L10C9JJH3 530 aa11.62□□□□□ -0.55
CLN8-202ENST00000517514 CD2BP2O95400 341 aaKnown RBP11.62□□□□□ -0.55
CLN8-202ENST00000517514 ZBTB48P10074 688 aaPredicted RBP11.62□□□□□ -0.55
CLN8-202ENST00000517514 TOP1P11387 765 aaKnown RBP11.62□□□□□ -0.55
CLN8-202ENST00000517514 LIFRP42702 1097 aa11.62□□□□□ -0.55
CLN8-202ENST00000517514 VEGFBP49765 207 aa11.62□□□□□ -0.55
CLN8-202ENST00000517514 HMGCS2P54868 508 aa11.62□□□□□ -0.55
CLN8-202ENST00000517514 EVCP57679 992 aa11.62□□□□□ -0.55
CLN8-202ENST00000517514 ATP2B2Q01814 1243 aa11.62□□□□□ -0.55
CLN8-202ENST00000517514 ZYXQ15942 572 aaKnown RBP11.62□□□□□ -0.55
CLN8-202ENST00000517514 SGMS1Q86VZ5 419 aa11.62□□□□□ -0.55
CLN8-202ENST00000517514 IQCA1Q86XH1 822 aa11.62□□□□□ -0.55
CLN8-202ENST00000517514 TMEM87BQ96K49 555 aa11.62□□□□□ -0.55
CLN8-202ENST00000517514 CAPNS2Q96L46 248 aa11.62□□□□□ -0.55
CLN8-202ENST00000517514 C12orf42Q96LP6 360 aa11.62□□□□□ -0.55
CLN8-202ENST00000517514 PTPN18Q99952 460 aa11.62□□□□□ -0.55
CLN8-202ENST00000517514 LARP6Q9BRS8 491 aaKnown RBP11.62□□□□□ -0.55
CLN8-202ENST00000517514 TBC1D2Q9BYX2 928 aa11.62□□□□□ -0.55
CLN8-202ENST00000517514 VCPKMTQ9H867 229 aa11.62□□□□□ -0.55
CLN8-202ENST00000517514 AS3MTQ9HBK9 375 aa11.62□□□□□ -0.55
CLN8-202ENST00000517514 CYP46A1Q9Y6A2 500 aa11.62□□□□□ -0.55
CLN8-202ENST00000517514 COL11A1P12107 1806 aaPredicted RBP11.62□□□□□ -0.55
CLN8-202ENST00000517514 F5H6K3 240 aa11.61□□□□□ -0.55
CLN8-202ENST00000517514 NDUFB10O96000 172 aa11.61□□□□□ -0.55
CLN8-202ENST00000517514 SNHG28P0DPA3 235 aa11.61□□□□□ -0.55
CLN8-202ENST00000517514 AK2P54819 239 aa11.61□□□□□ -0.55
CLN8-202ENST00000517514 KLRC3Q07444 240 aa11.61□□□□□ -0.55
CLN8-202ENST00000517514 TROAPQ12815 778 aa11.61□□□□□ -0.55
CLN8-202ENST00000517514 WTAPQ15007 396 aa11.61□□□□□ -0.55
CLN8-202ENST00000517514 SLC35G1Q2M3R5 365 aa11.61□□□□□ -0.55
CLN8-202ENST00000517514 TREML2Q5T2D2 321 aa11.61□□□□□ -0.55
CLN8-202ENST00000517514 USP17L2Q6R6M4 530 aa11.61□□□□□ -0.55
CLN8-202ENST00000517514 POTEEQ6S8J3 1075 aa11.61□□□□□ -0.55
CLN8-202ENST00000517514 DNAJC5GQ8N7S2 189 aa11.61□□□□□ -0.55
CLN8-202ENST00000517514 GMCL1P1Q8NEA9 526 aa11.61□□□□□ -0.55
CLN8-202ENST00000517514 CCDC102AQ96A19 550 aa11.61□□□□□ -0.55
CLN8-202ENST00000517514 NUP88Q99567 741 aaPredicted RBP11.61□□□□□ -0.55
CLN8-202ENST00000517514 UBAC1Q9BSL1 405 aa11.61□□□□□ -0.55
CLN8-202ENST00000517514 UPF2Q9HAU5 1272 aaKnown RBP11.61□□□□□ -0.55
CLN8-202ENST00000517514 ARHGEF10LQ9HCE6 1279 aa11.61□□□□□ -0.55
CLN8-202ENST00000517514 PDRG1Q9NUG6 133 aa11.61□□□□□ -0.55
CLN8-202ENST00000517514 SYNPO2Q9UMS6 1093 aa11.61□□□□□ -0.55
CLN8-202ENST00000517514 WDR33Q9C0J8 1336 aaKnown RBP11.6□□□□□ -0.55
CLN8-202ENST00000517514 A0A0G2JMZ2 1700 aa11.6□□□□□ -0.55
CLN8-202ENST00000517514 C19orf81C9J6K1 198 aa11.6□□□□□ -0.55
CLN8-202ENST00000517514 LARGE1O95461 756 aa11.6□□□□□ -0.55
CLN8-202ENST00000517514 PDHBP11177 359 aa11.6□□□□□ -0.55
CLN8-202ENST00000517514 VCAM1P19320 739 aa11.6□□□□□ -0.55
CLN8-202ENST00000517514 NEK4P51957 841 aa11.6□□□□□ -0.55
CLN8-202ENST00000517514 KIF23Q02241 960 aaPredicted RBP11.6□□□□□ -0.55
CLN8-202ENST00000517514 APOBRQ0VD83 1088 aa11.6□□□□□ -0.55
CLN8-202ENST00000517514 CCDC178Q5BJE1 867 aa11.6□□□□□ -0.55
CLN8-202ENST00000517514 IFIT1BQ5T764 474 aaKnown RBP11.6□□□□□ -0.55
CLN8-202ENST00000517514 SPICE1Q8N0Z3 855 aa11.6□□□□□ -0.55
CLN8-202ENST00000517514 PNMA1Q8ND90 353 aa11.6□□□□□ -0.55
CLN8-202ENST00000517514 BRF1Q92994 677 aa11.6□□□□□ -0.55
CLN8-202ENST00000517514 CHMP4CQ96CF2 233 aa11.6□□□□□ -0.55
CLN8-202ENST00000517514 MYL10Q9BUA6 226 aa11.6□□□□□ -0.55
CLN8-202ENST00000517514 FAM217BQ9NTX9 383 aaPredicted RBP11.6□□□□□ -0.55
CLN8-202ENST00000517514 HPS5Q9UPZ3 1129 aa11.6□□□□□ -0.55
CLN8-202ENST00000517514 SMCHD1A6NHR9 2005 aa11.6□□□□□ -0.55
CLN8-202ENST00000517514 NID2Q14112 1375 aa11.59□□□□□ -0.55
CLN8-202ENST00000517514 CCL15-CCL14A0A0B4J2E2 113 aa11.59□□□□□ -0.55
CLN8-202ENST00000517514 BTBD19C9JJ37 291 aa11.59□□□□□ -0.55
CLN8-202ENST00000517514 IGF2BP3O00425 579 aaKnown RBP eCLIP11.59□□□□□ -0.55
CLN8-202ENST00000517514 GTF2A2P52657 109 aa11.59□□□□□ -0.55
CLN8-202ENST00000517514 ST3GAL1Q11201 340 aa11.59□□□□□ -0.55
CLN8-202ENST00000517514 SNAPC2Q13487 334 aa11.59□□□□□ -0.55
CLN8-202ENST00000517514 RABEP1Q15276 862 aa11.59□□□□□ -0.55
CLN8-202ENST00000517514 CCL15Q16663 113 aa11.59□□□□□ -0.55
CLN8-202ENST00000517514 SLFN13Q68D06 897 aa11.59□□□□□ -0.55
CLN8-202ENST00000517514 TTBK2Q6IQ55 1244 aa11.59□□□□□ -0.55
CLN8-202ENST00000517514 APOA5Q6Q788 366 aa11.59□□□□□ -0.55
CLN8-202ENST00000517514 RAB11FIP4Q86YS3 637 aa11.59□□□□□ -0.55
CLN8-202ENST00000517514 ZNF654Q8IZM8 581 aa11.59□□□□□ -0.55
CLN8-202ENST00000517514 FAM43AQ8N2R8 423 aa11.59□□□□□ -0.55
CLN8-202ENST00000517514 PROCA1Q8NCQ7 364 aaPredicted RBP11.59□□□□□ -0.55
CLN8-202ENST00000517514 GMCL1Q96IK5 515 aa11.59□□□□□ -0.55
CLN8-202ENST00000517514 FEZ1Q99689 392 aa11.59□□□□□ -0.55
CLN8-202ENST00000517514 KAT14Q9H8E8 782 aa11.59□□□□□ -0.55
CLN8-202ENST00000517514 TPCN1Q9ULQ1 816 aa11.59□□□□□ -0.55
CLN8-202ENST00000517514 BAZ2BQ9UIF8 2168 aaKnown RBP11.58□□□□□ -0.56
CLN8-202ENST00000517514 KLF18A0A0U1RQI7 1052 aa11.58□□□□□ -0.56
CLN8-202ENST00000517514 CETPP11597 493 aa11.58□□□□□ -0.56
CLN8-202ENST00000517514 RXRAP19793 462 aa11.58□□□□□ -0.56
CLN8-202ENST00000517514 TM4SF4P48230 202 aa11.58□□□□□ -0.56
CLN8-202ENST00000517514 USP14P54578 494 aa11.58□□□□□ -0.56
CLN8-202ENST00000517514 GRM1Q13255 1194 aa11.58□□□□□ -0.56
CLN8-202ENST00000517514 GRM4Q14833 912 aa11.58□□□□□ -0.56
CLN8-202ENST00000517514 SART3Q15020 963 aaKnown RBP11.58□□□□□ -0.56
CLN8-202ENST00000517514 PPP4R3BQ5MIZ7 849 aa11.58□□□□□ -0.56
CLN8-202ENST00000517514 FAM83BQ5T0W9 1011 aa11.58□□□□□ -0.56
CLN8-202ENST00000517514 GADL1Q6ZQY3 521 aa11.58□□□□□ -0.56
CLN8-202ENST00000517514 STAG2Q8N3U4 1231 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms