RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 GTF3C2Q8WUA4 911 aaPredicted RBP16.81■□□□□ 0.28
PDGFRB-202ENST00000517488 COA7Q96BR5 231 aa16.81■□□□□ 0.28
PDGFRB-202ENST00000517488 VCPKMTQ9H867 229 aa16.81■□□□□ 0.28
PDGFRB-202ENST00000517488 SPDYE16A6NNV3 312 aaPredicted RBP16.8■□□□□ 0.28
PDGFRB-202ENST00000517488 SDSP20132 328 aa16.8■□□□□ 0.28
PDGFRB-202ENST00000517488 ZNF589Q86UQ0 364 aaPredicted RBP16.8■□□□□ 0.28
PDGFRB-202ENST00000517488 GJD2Q9UKL4 321 aa16.8■□□□□ 0.28
PDGFRB-202ENST00000517488 ADCY3O60266 1144 aa16.79■□□□□ 0.28
PDGFRB-202ENST00000517488 ELNP15502 786 aa16.79■□□□□ 0.28
PDGFRB-202ENST00000517488 MTFR1Q15390 333 aa16.79■□□□□ 0.28
PDGFRB-202ENST00000517488 ZNF444Q8N0Y2 327 aaPredicted RBP16.79■□□□□ 0.28
PDGFRB-202ENST00000517488 LPAR1Q92633 364 aa16.79■□□□□ 0.28
PDGFRB-202ENST00000517488 TANGO6Q9C0B7 1094 aa16.79■□□□□ 0.28
PDGFRB-202ENST00000517488 PORCNQ9H237 461 aa16.79■□□□□ 0.28
PDGFRB-202ENST00000517488 SH2D4AQ9H788 454 aa16.79■□□□□ 0.28
PDGFRB-202ENST00000517488 ZNF287Q9HBT7 754 aa16.79■□□□□ 0.28
PDGFRB-202ENST00000517488 INCENPQ9NQS7 918 aa16.79■□□□□ 0.28
PDGFRB-202ENST00000517488 BTBD7Q9P203 1132 aa16.79■□□□□ 0.28
PDGFRB-202ENST00000517488 RABGAP1Q9Y3P9 1069 aa16.79■□□□□ 0.28
PDGFRB-202ENST00000517488 KIAA0100Q14667 2235 aaKnown RBP16.79■□□□□ 0.28
PDGFRB-202ENST00000517488 IGKV6D-41A0A0C4DH26 115 aa16.78■□□□□ 0.28
PDGFRB-202ENST00000517488 EN2P19622 333 aaPredicted RBP16.78■□□□□ 0.28
PDGFRB-202ENST00000517488 CTDSPL2Q05D32 466 aa16.78■□□□□ 0.28
PDGFRB-202ENST00000517488 PDE4BQ07343 736 aa16.78■□□□□ 0.28
PDGFRB-202ENST00000517488 IRF5Q13568 498 aa16.78■□□□□ 0.28
PDGFRB-202ENST00000517488 COG2Q14746 738 aa16.78■□□□□ 0.28
PDGFRB-202ENST00000517488 ALX1Q15699 326 aa16.78■□□□□ 0.28
PDGFRB-202ENST00000517488 LBX2Q6XYB7 198 aa16.78■□□□□ 0.28
PDGFRB-202ENST00000517488 SLAIN1Q8ND83 568 aa16.78■□□□□ 0.28
PDGFRB-202ENST00000517488 BIN2Q9UBW5 565 aaPredicted RBP16.78■□□□□ 0.28
PDGFRB-202ENST00000517488 TACC3Q9Y6A5 838 aa16.78■□□□□ 0.28
PDGFRB-202ENST00000517488 MKI67P46013 3256 aaKnown RBP16.78■□□□□ 0.28
PDGFRB-202ENST00000517488 FGAP02671 866 aa16.77■□□□□ 0.28
PDGFRB-202ENST00000517488 SLC3A2P08195 630 aaKnown RBP16.77■□□□□ 0.28
PDGFRB-202ENST00000517488 HSPD1P10809 573 aaKnown RBP16.77■□□□□ 0.28
PDGFRB-202ENST00000517488 FAM47AQ5JRC9 791 aa16.77■□□□□ 0.28
PDGFRB-202ENST00000517488 CEP95Q96GE4 821 aa16.77■□□□□ 0.28
PDGFRB-202ENST00000517488 TMEM106CQ9BVX2 250 aa16.77■□□□□ 0.28
PDGFRB-202ENST00000517488 HOXC10Q9NYD6 342 aa16.77■□□□□ 0.28
PDGFRB-202ENST00000517488 NYAP2Q9P242 653 aa16.77■□□□□ 0.28
PDGFRB-202ENST00000517488 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.77■□□□□ 0.28
PDGFRB-202ENST00000517488 CCDC171Q6TFL3 1326 aa16.76■□□□□ 0.27
PDGFRB-202ENST00000517488 WDR46O15213 610 aaKnown RBP16.76■□□□□ 0.27
PDGFRB-202ENST00000517488 RAD21O60216 631 aa16.76■□□□□ 0.27
PDGFRB-202ENST00000517488 FLOT1O75955 427 aa16.76■□□□□ 0.27
PDGFRB-202ENST00000517488 GSPT1P15170 499 aaKnown RBP16.76■□□□□ 0.27
PDGFRB-202ENST00000517488 MAPK4P31152 587 aa16.76■□□□□ 0.27
PDGFRB-202ENST00000517488 TFAP4Q01664 338 aa16.76■□□□□ 0.27
PDGFRB-202ENST00000517488 CWC27Q6UX04 472 aaKnown RBP16.76■□□□□ 0.27
PDGFRB-202ENST00000517488 NEDD1Q8NHV4 660 aa16.76■□□□□ 0.27
PDGFRB-202ENST00000517488 PXYLP1Q8TE99 480 aa16.76■□□□□ 0.27
PDGFRB-202ENST00000517488 GOPCQ9HD26 462 aa16.76■□□□□ 0.27
PDGFRB-202ENST00000517488 MTMR4Q9NYA4 1195 aa16.76■□□□□ 0.27
PDGFRB-202ENST00000517488 CLIP2Q9UDT6 1046 aa16.76■□□□□ 0.27
PDGFRB-202ENST00000517488 ANAPC4Q9UJX5 808 aa16.76■□□□□ 0.27
PDGFRB-202ENST00000517488 TSPY3P0CV98 308 aa16.75■□□□□ 0.27
PDGFRB-202ENST00000517488 TSPY8P0CW00 308 aa16.75■□□□□ 0.27
PDGFRB-202ENST00000517488 DSG3P32926 999 aa16.75■□□□□ 0.27
PDGFRB-202ENST00000517488 TTC22Q5TAA0 569 aa16.75■□□□□ 0.27
PDGFRB-202ENST00000517488 SAMD1Q6SPF0 538 aaPredicted RBP16.75■□□□□ 0.27
PDGFRB-202ENST00000517488 GPR142Q7Z601 462 aa16.75■□□□□ 0.27
PDGFRB-202ENST00000517488 CCAR1Q8IX12 1150 aaKnown RBP16.75■□□□□ 0.27
PDGFRB-202ENST00000517488 ATG4CQ96DT6 458 aa16.75■□□□□ 0.27
PDGFRB-202ENST00000517488 DIAPH3Q9NSV4 1193 aa16.75■□□□□ 0.27
PDGFRB-202ENST00000517488 FBXO28Q9NVF7 368 aa16.75■□□□□ 0.27
PDGFRB-202ENST00000517488 F5H6K3 240 aa16.74■□□□□ 0.27
PDGFRB-202ENST00000517488 NDUFB10O96000 172 aa16.74■□□□□ 0.27
PDGFRB-202ENST00000517488 INHAP05111 366 aa16.74■□□□□ 0.27
PDGFRB-202ENST00000517488 CCL5P13501 91 aa16.74■□□□□ 0.27
PDGFRB-202ENST00000517488 CYP2B6P20813 491 aa16.74■□□□□ 0.27
PDGFRB-202ENST00000517488 UBXN2AP68543 259 aa16.74■□□□□ 0.27
PDGFRB-202ENST00000517488 CCNA1P78396 465 aa16.74■□□□□ 0.27
PDGFRB-202ENST00000517488 KLRC3Q07444 240 aa16.74■□□□□ 0.27
PDGFRB-202ENST00000517488 FAM83BQ5T0W9 1011 aa16.74■□□□□ 0.27
PDGFRB-202ENST00000517488 PLEKHH3Q7Z736 793 aa16.74■□□□□ 0.27
PDGFRB-202ENST00000517488 MKL1Q969V6 931 aa16.74■□□□□ 0.27
PDGFRB-202ENST00000517488 NUP88Q99567 741 aaPredicted RBP16.74■□□□□ 0.27
PDGFRB-202ENST00000517488 UNC93B1Q9H1C4 597 aa16.74■□□□□ 0.27
PDGFRB-202ENST00000517488 HIP1O00291 1037 aa16.73■□□□□ 0.27
PDGFRB-202ENST00000517488 TTLL1O95922 423 aa16.73■□□□□ 0.27
PDGFRB-202ENST00000517488 FGRP09769 529 aa16.73■□□□□ 0.27
PDGFRB-202ENST00000517488 HAND2P61296 217 aa16.73■□□□□ 0.27
PDGFRB-202ENST00000517488 MORN1Q5T089 497 aa16.73■□□□□ 0.27
PDGFRB-202ENST00000517488 WDR78Q5VTH9 848 aa16.73■□□□□ 0.27
PDGFRB-202ENST00000517488 LRRC47Q8N1G4 583 aaKnown RBP16.73■□□□□ 0.27
PDGFRB-202ENST00000517488 SOCS4Q8WXH5 440 aa16.73■□□□□ 0.27
PDGFRB-202ENST00000517488 USP6NLQ92738 828 aa16.73■□□□□ 0.27
PDGFRB-202ENST00000517488 NUDT12Q9BQG2 462 aa16.73■□□□□ 0.27
PDGFRB-202ENST00000517488 MOV10L1Q9BXT6 1211 aaKnown RBP16.73■□□□□ 0.27
PDGFRB-202ENST00000517488 RNF208Q9H0X6 261 aa16.73■□□□□ 0.27
PDGFRB-202ENST00000517488 PLIN4Q96Q06 1357 aa16.73■□□□□ 0.27
PDGFRB-202ENST00000517488 DOCK3Q8IZD9 2030 aa16.72■□□□□ 0.27
PDGFRB-202ENST00000517488 ORC4O43929 436 aa16.72■□□□□ 0.27
PDGFRB-202ENST00000517488 NMT2O60551 498 aa16.72■□□□□ 0.27
PDGFRB-202ENST00000517488 MFAP1P55081 439 aaKnown RBP16.72■□□□□ 0.27
PDGFRB-202ENST00000517488 TRIM32Q13049 653 aa16.72■□□□□ 0.27
PDGFRB-202ENST00000517488 MB21D1Q8N884 522 aa16.72■□□□□ 0.27
PDGFRB-202ENST00000517488 NBPF3Q9H094 633 aa16.72■□□□□ 0.27
PDGFRB-202ENST00000517488 SPATC1LQ9H0A9 340 aa16.72■□□□□ 0.27
PDGFRB-202ENST00000517488 CWC22Q9HCG8 908 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms