RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 LRIT3Q3SXY7 679 aa10.07□□□□□ -0.8
SCARNA20.3-201ENST00000516913 GJC2Q5T442 439 aaPredicted RBP10.07□□□□□ -0.8
SCARNA20.3-201ENST00000516913 SH3RF1Q7Z6J0 888 aa10.07□□□□□ -0.8
SCARNA20.3-201ENST00000516913 SPICE1Q8N0Z3 855 aa10.07□□□□□ -0.8
SCARNA20.3-201ENST00000516913 DEFB123Q8N688 67 aa10.07□□□□□ -0.8
SCARNA20.3-201ENST00000516913 REPS2Q8NFH8 660 aa10.07□□□□□ -0.8
SCARNA20.3-201ENST00000516913 SOCS4Q8WXH5 440 aa10.07□□□□□ -0.8
SCARNA20.3-201ENST00000516913 ATG4CQ96DT6 458 aa10.07□□□□□ -0.8
SCARNA20.3-201ENST00000516913 GUCD1Q96NT3 240 aa10.07□□□□□ -0.8
SCARNA20.3-201ENST00000516913 PUS7LQ9H0K6 701 aaKnown RBP10.07□□□□□ -0.8
SCARNA20.3-201ENST00000516913 COG6Q9Y2V7 657 aa10.07□□□□□ -0.8
SCARNA20.3-201ENST00000516913 MYH1P12882 1939 aa10.06□□□□□ -0.8
SCARNA20.3-201ENST00000516913 POTEB2H3BUK9 544 aa10.06□□□□□ -0.8
SCARNA20.3-201ENST00000516913 MBD4O95243 580 aa10.06□□□□□ -0.8
SCARNA20.3-201ENST00000516913 ERCC3P19447 782 aa10.06□□□□□ -0.8
SCARNA20.3-201ENST00000516913 ADORA2AP29274 412 aa10.06□□□□□ -0.8
SCARNA20.3-201ENST00000516913 ADD2P35612 726 aa10.06□□□□□ -0.8
SCARNA20.3-201ENST00000516913 EPHB4P54760 987 aa10.06□□□□□ -0.8
SCARNA20.3-201ENST00000516913 MAP3K12Q12852 859 aa10.06□□□□□ -0.8
SCARNA20.3-201ENST00000516913 TMEM132BQ14DG7 1078 aa10.06□□□□□ -0.8
SCARNA20.3-201ENST00000516913 C9orf50Q5SZB4 431 aa10.06□□□□□ -0.8
SCARNA20.3-201ENST00000516913 FTSJ3Q8IY81 847 aaKnown RBP10.06□□□□□ -0.8
SCARNA20.3-201ENST00000516913 TDHQ8IZJ6 230 aa10.06□□□□□ -0.8
SCARNA20.3-201ENST00000516913 LENG1Q96BZ8 264 aaPredicted RBP10.06□□□□□ -0.8
SCARNA20.3-201ENST00000516913 DNAJC2Q99543 621 aaKnown RBP10.06□□□□□ -0.8
SCARNA20.3-201ENST00000516913 SENP6Q9GZR1 1112 aaPredicted RBP10.06□□□□□ -0.8
SCARNA20.3-201ENST00000516913 BCL11AQ9H165 835 aa10.06□□□□□ -0.8
SCARNA20.3-201ENST00000516913 BOLA2Q9H3K6 86 aa10.06□□□□□ -0.8
SCARNA20.3-201ENST00000516913 MCM9Q9NXL9 1143 aa10.06□□□□□ -0.8
SCARNA20.3-201ENST00000516913 DDX20Q9UHI6 824 aaKnown RBP10.06□□□□□ -0.8
SCARNA20.3-201ENST00000516913 ADAMTS5Q9UNA0 930 aa10.06□□□□□ -0.8
SCARNA20.3-201ENST00000516913 XIRP2A4UGR9 3374 aa10.05□□□□□ -0.8
SCARNA20.3-201ENST00000516913 TRIM43BA6NCK2 446 aa10.05□□□□□ -0.8
SCARNA20.3-201ENST00000516913 USP17L12C9JPN9 530 aa10.05□□□□□ -0.8
SCARNA20.3-201ENST00000516913 USP17L21D6R901 530 aa10.05□□□□□ -0.8
SCARNA20.3-201ENST00000516913 POLR3DP05423 398 aaPredicted RBP10.05□□□□□ -0.8
SCARNA20.3-201ENST00000516913 DSG3P32926 999 aa10.05□□□□□ -0.8
SCARNA20.3-201ENST00000516913 CDK8P49336 464 aa10.05□□□□□ -0.8
SCARNA20.3-201ENST00000516913 COG2Q14746 738 aa10.05□□□□□ -0.8
SCARNA20.3-201ENST00000516913 C12orf60Q5U649 245 aa10.05□□□□□ -0.8
SCARNA20.3-201ENST00000516913 TSHZ3Q63HK5 1081 aa10.05□□□□□ -0.8
SCARNA20.3-201ENST00000516913 TTC6Q86TZ1 520 aa10.05□□□□□ -0.8
SCARNA20.3-201ENST00000516913 SLC17A8Q8NDX2 589 aa10.05□□□□□ -0.8
SCARNA20.3-201ENST00000516913 TRIM43Q96BQ3 446 aaPredicted RBP10.05□□□□□ -0.8
SCARNA20.3-201ENST00000516913 FEZ1Q99689 392 aa10.05□□□□□ -0.8
SCARNA20.3-201ENST00000516913 SPATC1LQ9H0A9 340 aa10.05□□□□□ -0.8
SCARNA20.3-201ENST00000516913 TACC3Q9Y6A5 838 aa10.05□□□□□ -0.8
SCARNA20.3-201ENST00000516913 BDP1A6H8Y1 2624 aa10.05□□□□□ -0.8
SCARNA20.3-201ENST00000516913 ZBED9Q6R2W3 1325 aa10.05□□□□□ -0.8
SCARNA20.3-201ENST00000516913 DLL1O00548 723 aa10.04□□□□□ -0.8
SCARNA20.3-201ENST00000516913 ADCY6O43306 1168 aa10.04□□□□□ -0.8
SCARNA20.3-201ENST00000516913 IGSF3O75054 1194 aa10.04□□□□□ -0.8
SCARNA20.3-201ENST00000516913 PGK2P07205 417 aa10.04□□□□□ -0.8
SCARNA20.3-201ENST00000516913 ATP5JP18859 108 aa10.04□□□□□ -0.8
SCARNA20.3-201ENST00000516913 RTP1P59025 263 aa10.04□□□□□ -0.8
SCARNA20.3-201ENST00000516913 PDE3AQ14432 1141 aa10.04□□□□□ -0.8
SCARNA20.3-201ENST00000516913 WDR78Q5VTH9 848 aa10.04□□□□□ -0.8
SCARNA20.3-201ENST00000516913 CTR9Q6PD62 1173 aa10.04□□□□□ -0.8
SCARNA20.3-201ENST00000516913 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.04□□□□□ -0.8
SCARNA20.3-201ENST00000516913 FGD4Q96M96 766 aa10.04□□□□□ -0.8
SCARNA20.3-201ENST00000516913 NUP88Q99567 741 aaPredicted RBP10.04□□□□□ -0.8
SCARNA20.3-201ENST00000516913 TRIM34Q9BYJ4 488 aa10.04□□□□□ -0.8
SCARNA20.3-201ENST00000516913 UBE2OQ9C0C9 1292 aaKnown RBP10.04□□□□□ -0.8
SCARNA20.3-201ENST00000516913 TMX2Q9Y320 296 aa10.04□□□□□ -0.8
SCARNA20.3-201ENST00000516913 RIPK3Q9Y572 518 aa10.04□□□□□ -0.8
SCARNA20.3-201ENST00000516913 DDX49Q9Y6V7 483 aaKnown RBP10.04□□□□□ -0.8
SCARNA20.3-201ENST00000516913 SMCHD1A6NHR9 2005 aa10.03□□□□□ -0.8
SCARNA20.3-201ENST00000516913 MPHOSPH10O00566 681 aaKnown RBP10.03□□□□□ -0.8
SCARNA20.3-201ENST00000516913 EEF2P13639 858 aaKnown RBP10.03□□□□□ -0.8
SCARNA20.3-201ENST00000516913 CAPN2P17655 700 aa10.03□□□□□ -0.8
SCARNA20.3-201ENST00000516913 PTGS1P23219 599 aa10.03□□□□□ -0.8
SCARNA20.3-201ENST00000516913 USP14P54578 494 aa10.03□□□□□ -0.8
SCARNA20.3-201ENST00000516913 ATP2B2Q01814 1243 aa10.03□□□□□ -0.8
SCARNA20.3-201ENST00000516913 SNX17Q15036 470 aa10.03□□□□□ -0.8
SCARNA20.3-201ENST00000516913 SHHQ15465 462 aa10.03□□□□□ -0.8
SCARNA20.3-201ENST00000516913 FAM47AQ5JRC9 791 aa10.03□□□□□ -0.8
SCARNA20.3-201ENST00000516913 OTUD7AQ8TE49 926 aaPredicted RBP10.03□□□□□ -0.8
SCARNA20.3-201ENST00000516913 LPAR1Q92633 364 aa10.03□□□□□ -0.8
SCARNA20.3-201ENST00000516913 FERMT2Q96AC1 680 aa10.03□□□□□ -0.8
SCARNA20.3-201ENST00000516913 HAUS7Q99871 368 aa10.03□□□□□ -0.8
SCARNA20.3-201ENST00000516913 CRNKL1Q9BZJ0 848 aaKnown RBP10.03□□□□□ -0.8
SCARNA20.3-201ENST00000516913 VCPKMTQ9H867 229 aa10.03□□□□□ -0.8
SCARNA20.3-201ENST00000516913 EPB41L4AQ9HCS5 686 aaPredicted RBP10.03□□□□□ -0.8
SCARNA20.3-201ENST00000516913 PAG1Q9NWQ8 432 aa10.03□□□□□ -0.8
SCARNA20.3-201ENST00000516913 A0A0G2JMZ2 1700 aa10.02□□□□□ -0.8
SCARNA20.3-201ENST00000516913 GSG1L2A8MUP6 293 aa10.02□□□□□ -0.81
SCARNA20.3-201ENST00000516913 FOXP2O15409 715 aa10.02□□□□□ -0.81
SCARNA20.3-201ENST00000516913 ZNF865P0CJ78 1059 aaPredicted RBP10.02□□□□□ -0.81
SCARNA20.3-201ENST00000516913 CNGA1P29973 690 aa10.02□□□□□ -0.81
SCARNA20.3-201ENST00000516913 ADCYAP1R1P41586 468 aa10.02□□□□□ -0.81
SCARNA20.3-201ENST00000516913 LRRC41Q15345 812 aa10.02□□□□□ -0.81
SCARNA20.3-201ENST00000516913 ZNF792Q3KQV3 632 aa10.02□□□□□ -0.81
SCARNA20.3-201ENST00000516913 MFSD14CQ5VZR4 134 aa10.02□□□□□ -0.81
SCARNA20.3-201ENST00000516913 OLFML2BQ68BL8 750 aa10.02□□□□□ -0.81
SCARNA20.3-201ENST00000516913 SLC39A5Q6ZMH5 540 aa10.02□□□□□ -0.81
SCARNA20.3-201ENST00000516913 C16orf86Q6ZW13 317 aa10.02□□□□□ -0.81
SCARNA20.3-201ENST00000516913 TRMT44Q8IYL2 757 aaKnown RBP10.02□□□□□ -0.81
SCARNA20.3-201ENST00000516913 GTF3C2Q8WUA4 911 aaPredicted RBP10.02□□□□□ -0.81
SCARNA20.3-201ENST00000516913 OSBP2Q969R2 916 aa10.02□□□□□ -0.81
SCARNA20.3-201ENST00000516913 KIF1BPQ96EK5 621 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms