RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 SRFP11831 508 aa5.06□□□□□ -1.6
RNU6-1088P-201ENST00000516850 RAG1P15918 1043 aa5.06□□□□□ -1.6
RNU6-1088P-201ENST00000516850 FAM196AQ6ZSG2 479 aa5.06□□□□□ -1.6
RNU6-1088P-201ENST00000516850 HS2ST1Q7LGA3 356 aa5.06□□□□□ -1.6
RNU6-1088P-201ENST00000516850 REC114Q7Z4M0 266 aa5.06□□□□□ -1.6
RNU6-1088P-201ENST00000516850 ANKLE2Q86XL3 938 aa5.06□□□□□ -1.6
RNU6-1088P-201ENST00000516850 SPPL2CQ8IUH8 684 aa5.06□□□□□ -1.6
RNU6-1088P-201ENST00000516850 KIF2CQ99661 725 aa5.06□□□□□ -1.6
RNU6-1088P-201ENST00000516850 DCP1AQ9NPI6 582 aaPredicted RBP5.06□□□□□ -1.6
RNU6-1088P-201ENST00000516850 SUPT16HQ9Y5B9 1047 aaKnown RBP5.06□□□□□ -1.6
RNU6-1088P-201ENST00000516850 SSU72P8A0A1W2PR75 194 aa5.05□□□□□ -1.6
RNU6-1088P-201ENST00000516850 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.05□□□□□ -1.6
RNU6-1088P-201ENST00000516850 LRRN2O75325 713 aa5.05□□□□□ -1.6
RNU6-1088P-201ENST00000516850 HPXP02790 462 aa5.05□□□□□ -1.6
RNU6-1088P-201ENST00000516850 TMEM253P0C7T8 217 aa5.05□□□□□ -1.6
RNU6-1088P-201ENST00000516850 EIF4A3P38919 411 aaKnown RBP5.05□□□□□ -1.6
RNU6-1088P-201ENST00000516850 GAB4Q2WGN9 574 aa5.05□□□□□ -1.6
RNU6-1088P-201ENST00000516850 LILRA2Q8N149 483 aa5.05□□□□□ -1.6
RNU6-1088P-201ENST00000516850 PDZD8Q8NEN9 1154 aa5.05□□□□□ -1.6
RNU6-1088P-201ENST00000516850 ZSCAN18Q8TBC5 510 aaPredicted RBP5.05□□□□□ -1.6
RNU6-1088P-201ENST00000516850 GIPC2Q8TF65 315 aa5.05□□□□□ -1.6
RNU6-1088P-201ENST00000516850 EPB41L4BQ9H329 900 aa5.05□□□□□ -1.6
RNU6-1088P-201ENST00000516850 GGT7Q9UJ14 662 aa5.05□□□□□ -1.6
RNU6-1088P-201ENST00000516850 POLR3KQ9Y2Y1 108 aaPredicted RBP5.05□□□□□ -1.6
RNU6-1088P-201ENST00000516850 FITM1A5D6W6 292 aa5.04□□□□□ -1.6
RNU6-1088P-201ENST00000516850 ERVFC1P60507 584 aa5.04□□□□□ -1.6
RNU6-1088P-201ENST00000516850 RNF4P78317 190 aa5.04□□□□□ -1.6
RNU6-1088P-201ENST00000516850 DUSP4Q13115 394 aa5.04□□□□□ -1.6
RNU6-1088P-201ENST00000516850 FBXL19Q6PCT2 694 aa5.04□□□□□ -1.6
RNU6-1088P-201ENST00000516850 FBXO27Q8NI29 283 aa5.04□□□□□ -1.6
RNU6-1088P-201ENST00000516850 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.04□□□□□ -1.6
RNU6-1088P-201ENST00000516850 PCDHB14Q9Y5E9 798 aa5.04□□□□□ -1.6
RNU6-1088P-201ENST00000516850 PCDHA11Q9Y5I1 949 aa5.04□□□□□ -1.6
RNU6-1088P-201ENST00000516850 SLC22A31A6NKX4 558 aa5.03□□□□□ -1.6
RNU6-1088P-201ENST00000516850 RGS13O14921 159 aa5.03□□□□□ -1.6
RNU6-1088P-201ENST00000516850 TSPAN15O95858 294 aa5.03□□□□□ -1.6
RNU6-1088P-201ENST00000516850 MCM4P33991 863 aa5.03□□□□□ -1.6
RNU6-1088P-201ENST00000516850 CHRNEQ04844 493 aa5.03□□□□□ -1.6
RNU6-1088P-201ENST00000516850 ARSHQ5FYA8 562 aa5.03□□□□□ -1.6
RNU6-1088P-201ENST00000516850 ERMP1Q7Z2K6 904 aa5.03□□□□□ -1.6
RNU6-1088P-201ENST00000516850 ENOX1Q8TC92 643 aaKnown RBP5.03□□□□□ -1.6
RNU6-1088P-201ENST00000516850 ZNF296Q8WUU4 475 aaPredicted RBP5.03□□□□□ -1.6
RNU6-1088P-201ENST00000516850 KCNN1Q92952 543 aa5.03□□□□□ -1.6
RNU6-1088P-201ENST00000516850 BRMS1Q9HCU9 246 aa5.03□□□□□ -1.6
RNU6-1088P-201ENST00000516850 COPRSQ9NQ92 184 aa5.03□□□□□ -1.6
RNU6-1088P-201ENST00000516850 RBM47A0AV96 593 aaKnown RBP5.02□□□□□ -1.61
RNU6-1088P-201ENST00000516850 RBAK-RBAKDNI3L0D1 243 aa5.02□□□□□ -1.61
RNU6-1088P-201ENST00000516850 ZGLP1P0C6A0 271 aa5.02□□□□□ -1.61
RNU6-1088P-201ENST00000516850 GARTP22102 1010 aa5.02□□□□□ -1.61
RNU6-1088P-201ENST00000516850 RAD51AP2Q09MP3 1159 aa5.02□□□□□ -1.61
RNU6-1088P-201ENST00000516850 KRTAP19-4Q3LI73 84 aa5.02□□□□□ -1.61
RNU6-1088P-201ENST00000516850 SLC26A8Q96RN1 970 aa5.02□□□□□ -1.61
RNU6-1088P-201ENST00000516850 LRRC3Q9BY71 257 aa5.02□□□□□ -1.61
RNU6-1088P-201ENST00000516850 SLC6A17Q9H1V8 727 aa5.02□□□□□ -1.61
RNU6-1088P-201ENST00000516850 GMIPQ9P107 970 aa5.02□□□□□ -1.61
RNU6-1088P-201ENST00000516850 ZMYM5Q9UJ78 669 aa5.02□□□□□ -1.61
RNU6-1088P-201ENST00000516850 ARID1BQ8NFD5 2236 aaPredicted RBP5.01□□□□□ -1.61
RNU6-1088P-201ENST00000516850 TCAF2A6NFQ2 919 aa5.01□□□□□ -1.61
RNU6-1088P-201ENST00000516850 GREM1O60565 184 aa5.01□□□□□ -1.61
RNU6-1088P-201ENST00000516850 ATE1O95260 518 aa5.01□□□□□ -1.61
RNU6-1088P-201ENST00000516850 RPL10P27635 214 aaKnown RBP5.01□□□□□ -1.61
RNU6-1088P-201ENST00000516850 TRHRP34981 398 aaPredicted RBP5.01□□□□□ -1.61
RNU6-1088P-201ENST00000516850 ZNF165P49910 485 aa5.01□□□□□ -1.61
RNU6-1088P-201ENST00000516850 APOBRQ0VD83 1088 aa5.01□□□□□ -1.61
RNU6-1088P-201ENST00000516850 NMIQ13287 307 aaPredicted RBP5.01□□□□□ -1.61
RNU6-1088P-201ENST00000516850 SNX17Q15036 470 aa5.01□□□□□ -1.61
RNU6-1088P-201ENST00000516850 NR0B2Q15466 257 aa5.01□□□□□ -1.61
RNU6-1088P-201ENST00000516850 LRRFIP1Q32MZ4 808 aaKnown RBP5.01□□□□□ -1.61
RNU6-1088P-201ENST00000516850 SEZ6Q53EL9 994 aa5.01□□□□□ -1.61
RNU6-1088P-201ENST00000516850 ANKS4BQ8N8V4 417 aa5.01□□□□□ -1.61
RNU6-1088P-201ENST00000516850 TMEM87AQ8NBN3 555 aa5.01□□□□□ -1.61
RNU6-1088P-201ENST00000516850 C19orf44Q9H6X5 657 aa5.01□□□□□ -1.61
RNU6-1088P-201ENST00000516850 CWC22Q9HCG8 908 aaKnown RBP5.01□□□□□ -1.61
RNU6-1088P-201ENST00000516850 KCNQ5Q9NR82 932 aa5.01□□□□□ -1.61
RNU6-1088P-201ENST00000516850 SHISA3A0PJX4 238 aa5□□□□□ -1.61
RNU6-1088P-201ENST00000516850 DNAJA2O60884 412 aa5□□□□□ -1.61
RNU6-1088P-201ENST00000516850 CLEC3AO75596 197 aa5□□□□□ -1.61
RNU6-1088P-201ENST00000516850 C1QTNF9P0C862 333 aa5□□□□□ -1.61
RNU6-1088P-201ENST00000516850 CCNFP41002 786 aa5□□□□□ -1.61
RNU6-1088P-201ENST00000516850 PCBP3P57721 371 aaKnown RBP5□□□□□ -1.61
RNU6-1088P-201ENST00000516850 TMEM132EQ6IEE7 984 aa5□□□□□ -1.61
RNU6-1088P-201ENST00000516850 RNF111Q6ZNA4 994 aa5□□□□□ -1.61
RNU6-1088P-201ENST00000516850 GK5Q6ZS86 529 aa5□□□□□ -1.61
RNU6-1088P-201ENST00000516850 SYTL5Q8TDW5 730 aaPredicted RBP5□□□□□ -1.61
RNU6-1088P-201ENST00000516850 NKD1Q969G9 470 aa5□□□□□ -1.61
RNU6-1088P-201ENST00000516850 RNF32Q9H0A6 362 aa5□□□□□ -1.61
RNU6-1088P-201ENST00000516850 GPR160Q9UJ42 338 aa5□□□□□ -1.61
RNU6-1088P-201ENST00000516850 KRTAP4-8A0A0G2JLE6 195 aa4.99□□□□□ -1.61
RNU6-1088P-201ENST00000516850 ZBTB7CA1YPR0 619 aa4.99□□□□□ -1.61
RNU6-1088P-201ENST00000516850 CFPP27918 469 aa4.99□□□□□ -1.61
RNU6-1088P-201ENST00000516850 PDE6BP35913 854 aa4.99□□□□□ -1.61
RNU6-1088P-201ENST00000516850 TEKQ02763 1124 aa4.99□□□□□ -1.61
RNU6-1088P-201ENST00000516850 SLC14A2Q15849 920 aa4.99□□□□□ -1.61
RNU6-1088P-201ENST00000516850 FBLN7Q53RD9 439 aa4.99□□□□□ -1.61
RNU6-1088P-201ENST00000516850 NBPF12Q5TAG4 269 aaPredicted RBP4.99□□□□□ -1.61
RNU6-1088P-201ENST00000516850 CDCP2Q5VXM1 449 aa4.99□□□□□ -1.61
RNU6-1088P-201ENST00000516850 OVOS1Q6IE37 1185 aa4.99□□□□□ -1.61
RNU6-1088P-201ENST00000516850 ATG14Q6ZNE5 492 aa4.99□□□□□ -1.61
RNU6-1088P-201ENST00000516850 WAPLQ7Z5K2 1190 aa4.99□□□□□ -1.61
RNU6-1088P-201ENST00000516850 IRF2BP1Q8IU81 584 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms