RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 EDEM1Q92611 657 aa1.55□□□□□ -2.16
RNU6-557P-201ENST00000516842 DHX38Q92620 1227 aaKnown RBP1.55□□□□□ -2.16
RNU6-557P-201ENST00000516842 PMEPA1Q969W9 287 aa1.55□□□□□ -2.16
RNU6-557P-201ENST00000516842 PLCD4Q9BRC7 762 aa1.55□□□□□ -2.16
RNU6-557P-201ENST00000516842 MKNK1Q9BUB5 465 aa1.55□□□□□ -2.16
RNU6-557P-201ENST00000516842 G6PC3Q9BUM1 346 aa1.55□□□□□ -2.16
RNU6-557P-201ENST00000516842 DEF6Q9H4E7 631 aa1.55□□□□□ -2.16
RNU6-557P-201ENST00000516842 LIN7BQ9HAP6 207 aa1.55□□□□□ -2.16
RNU6-557P-201ENST00000516842 RTN4Q9NQC3 1192 aaKnown RBP1.55□□□□□ -2.16
RNU6-557P-201ENST00000516842 SLAIN2Q9P270 581 aa1.55□□□□□ -2.16
RNU6-557P-201ENST00000516842 PMF1-BGLAPU3KQ54 211 aa1.55□□□□□ -2.16
RNU6-557P-201ENST00000516842 ATF2P15336 505 aa1.54□□□□□ -2.16
RNU6-557P-201ENST00000516842 HTRA3P83110 453 aa1.54□□□□□ -2.16
RNU6-557P-201ENST00000516842 FOXO4P98177 505 aa1.54□□□□□ -2.16
RNU6-557P-201ENST00000516842 ZNF200P98182 395 aaPredicted RBP1.54□□□□□ -2.16
RNU6-557P-201ENST00000516842 CHRNEQ04844 493 aa1.54□□□□□ -2.16
RNU6-557P-201ENST00000516842 DNM1Q05193 864 aaKnown RBP1.54□□□□□ -2.16
RNU6-557P-201ENST00000516842 FAAP100Q0VG06 881 aa1.54□□□□□ -2.16
RNU6-557P-201ENST00000516842 PCSK4Q6UW60 755 aa1.54□□□□□ -2.16
RNU6-557P-201ENST00000516842 CDH24Q86UP0 819 aa1.54□□□□□ -2.16
RNU6-557P-201ENST00000516842 PDZD3Q86UT5 571 aa1.54□□□□□ -2.16
RNU6-557P-201ENST00000516842 Q96M66 194 aa1.54□□□□□ -2.16
RNU6-557P-201ENST00000516842 ARXQ96QS3 562 aa1.54□□□□□ -2.16
RNU6-557P-201ENST00000516842 FBRSQ9HAH7 460 aa1.54□□□□□ -2.16
RNU6-557P-201ENST00000516842 PPP4R1LQ9P1A2 415 aa1.54□□□□□ -2.16
RNU6-557P-201ENST00000516842 POM121CA8CG34 1229 aa1.53□□□□□ -2.16
RNU6-557P-201ENST00000516842 GPR42O15529 346 aa1.53□□□□□ -2.16
RNU6-557P-201ENST00000516842 TNFRSF21O75509 655 aa1.53□□□□□ -2.16
RNU6-557P-201ENST00000516842 LRIG2O94898 1065 aa1.53□□□□□ -2.16
RNU6-557P-201ENST00000516842 BMP5P22003 454 aa1.53□□□□□ -2.16
RNU6-557P-201ENST00000516842 HAP1P54257 671 aaPredicted RBP1.53□□□□□ -2.16
RNU6-557P-201ENST00000516842 ZC3H6P61129 1189 aaKnown RBP1.53□□□□□ -2.16
RNU6-557P-201ENST00000516842 GRM7Q14831 915 aa1.53□□□□□ -2.16
RNU6-557P-201ENST00000516842 RAB3GAP1Q15042 981 aa1.53□□□□□ -2.16
RNU6-557P-201ENST00000516842 NKG7Q16617 165 aa1.53□□□□□ -2.16
RNU6-557P-201ENST00000516842 ZBTB37Q5TC79 503 aa1.53□□□□□ -2.16
RNU6-557P-201ENST00000516842 GRASPQ7Z6J2 395 aaPredicted RBP1.53□□□□□ -2.16
RNU6-557P-201ENST00000516842 AMER2Q8N7J2 671 aa1.53□□□□□ -2.16
RNU6-557P-201ENST00000516842 ANKS4BQ8N8V4 417 aa1.53□□□□□ -2.16
RNU6-557P-201ENST00000516842 GPBAR1Q8TDU6 330 aa1.53□□□□□ -2.16
RNU6-557P-201ENST00000516842 PICK1Q9NRD5 415 aa1.53□□□□□ -2.16
RNU6-557P-201ENST00000516842 KRT82Q9NSB4 513 aa1.53□□□□□ -2.16
RNU6-557P-201ENST00000516842 STIM2Q9P246 746 aa1.53□□□□□ -2.16
RNU6-557P-201ENST00000516842 DMRT1Q9Y5R6 373 aa1.53□□□□□ -2.16
RNU6-557P-201ENST00000516842 HCFC2Q9Y5Z7 792 aa1.53□□□□□ -2.16
RNU6-557P-201ENST00000516842 USP17L15C9J2P7 530 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 USP17L10C9JJH3 530 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 USP17L13C9JLJ4 530 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 USP17L12C9JPN9 530 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 USP17L11C9JVI0 530 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 USP17L21D6R901 530 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 USP17L18D6R9N7 530 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 USP17L22D6RA61 530 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 USP17L17D6RBQ6 530 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 USP17L19D6RCP7 530 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 USP17L20D6RJB6 530 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 ABLIM1O14639 778 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 MUSKO15146 869 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 PRMT3O60678 531 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 FBLP22087 321 aaKnown RBP1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 RFX1P22670 979 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 MC3RP41968 323 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 ERVFRD-1P60508 538 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 DAB2P98082 770 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 PLCB2Q00722 1185 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 TEKQ02763 1124 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 USP17L24Q0WX57 530 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 MIIPQ5JXC2 388 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 MAP1SQ66K74 1059 aaPredicted RBP1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 OLFML2BQ68BL8 750 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 LETMD1Q6P1Q0 360 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 CEP128Q6ZU80 1094 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 CDC37L1Q7L3B6 337 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 DNERQ8NFT8 737 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 ZNF503Q96F45 646 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 CSRNP2Q9H175 543 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 CRTAC1Q9NQ79 661 aa1.52□□□□□ -2.17
RNU6-557P-201ENST00000516842 INO80B-WBP1J3KQ70 363 aa1.51□□□□□ -2.17
RNU6-557P-201ENST00000516842 MASP2O00187 686 aa1.51□□□□□ -2.17
RNU6-557P-201ENST00000516842 PDGFAP04085 211 aa1.51□□□□□ -2.17
RNU6-557P-201ENST00000516842 MPOP05164 745 aa1.51□□□□□ -2.17
RNU6-557P-201ENST00000516842 PNLIPP16233 465 aa1.51□□□□□ -2.17
RNU6-557P-201ENST00000516842 ZNF37AP17032 561 aaPredicted RBP1.51□□□□□ -2.17
RNU6-557P-201ENST00000516842 CTGFP29279 349 aa1.51□□□□□ -2.17
RNU6-557P-201ENST00000516842 SARSP49591 514 aaKnown RBP1.51□□□□□ -2.17
RNU6-557P-201ENST00000516842 COL10A1Q03692 680 aa1.51□□□□□ -2.17
RNU6-557P-201ENST00000516842 RING1Q06587 406 aa1.51□□□□□ -2.17
RNU6-557P-201ENST00000516842 DUSP4Q13115 394 aa1.51□□□□□ -2.17
RNU6-557P-201ENST00000516842 SLBPQ14493 270 aaKnown RBP eCLIP1.51□□□□□ -2.17
RNU6-557P-201ENST00000516842 SLC14A2Q15849 920 aa1.51□□□□□ -2.17
RNU6-557P-201ENST00000516842 NRN1LQ496H8 165 aa1.51□□□□□ -2.17
RNU6-557P-201ENST00000516842 RPTNQ6XPR3 784 aa1.51□□□□□ -2.17
RNU6-557P-201ENST00000516842 TSPYL5Q86VY4 417 aaPredicted RBP1.51□□□□□ -2.17
RNU6-557P-201ENST00000516842 IGDCC4Q8TDY8 1250 aa1.51□□□□□ -2.17
RNU6-557P-201ENST00000516842 PTPN18Q99952 460 aa1.51□□□□□ -2.17
RNU6-557P-201ENST00000516842 INO80BQ9C086 356 aaPredicted RBP1.51□□□□□ -2.17
RNU6-557P-201ENST00000516842 SPATA6Q9NWH7 488 aaPredicted RBP1.51□□□□□ -2.17
RNU6-557P-201ENST00000516842 AMOTL2Q9Y2J4 779 aa1.51□□□□□ -2.17
RNU6-557P-201ENST00000516842 SERINC4A6NH21 518 aa1.5□□□□□ -2.17
RNU6-557P-201ENST00000516842 NRDCO43847 1150 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms