RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 ATL2Q8NHH9 583 aa5.8□□□□□ -1.48
RNU6-488P-201ENST00000515918 ZNF417Q8TAU3 575 aa5.8□□□□□ -1.48
RNU6-488P-201ENST00000515918 ZNF507Q8TCN5 953 aa5.8□□□□□ -1.48
RNU6-488P-201ENST00000515918 ZNF512BQ96KM6 892 aaPredicted RBP5.8□□□□□ -1.48
RNU6-488P-201ENST00000515918 MRGPRX3Q96LB0 322 aa5.8□□□□□ -1.48
RNU6-488P-201ENST00000515918 CCDC74BQ96LY2 380 aa5.8□□□□□ -1.48
RNU6-488P-201ENST00000515918 ZNF587Q96SQ5 575 aaPredicted RBP5.8□□□□□ -1.48
RNU6-488P-201ENST00000515918 LRP2BPQ9P2M1 347 aa5.8□□□□□ -1.48
RNU6-488P-201ENST00000515918 MAGEC2Q9UBF1 373 aaPredicted RBP5.8□□□□□ -1.48
RNU6-488P-201ENST00000515918 ZNF451Q9Y4E5 1061 aa5.8□□□□□ -1.48
RNU6-488P-201ENST00000515918 IGF1RP08069 1367 aa5.8□□□□□ -1.48
RNU6-488P-201ENST00000515918 SHOXO15266 292 aa5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 KATNA1O75449 491 aa5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 CLEC3AO75596 197 aa5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 NEFMP07197 916 aa5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 GBP1P32455 592 aa5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 CD68P34810 354 aaPredicted RBP5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 SUMO1P63165 101 aaKnown RBP5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 HNRNPUQ00839 825 aaKnown RBP eCLIP5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 COL9A3Q14050 684 aaPredicted RBP5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 LRRC41Q15345 812 aa5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 ANKRD39Q53RE8 183 aa5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 EXOSC6Q5RKV6 272 aaKnown RBP5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 DDX46Q7L014 1031 aaKnown RBP5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 FGD2Q7Z6J4 655 aa5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 CCDC146Q8IYE0 955 aa5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 RNF214Q8ND24 703 aa5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 PPP1R13LQ8WUF5 828 aa5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 LEO1Q8WVC0 666 aaPredicted RBP5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 PPP1R14AQ96A00 147 aa5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 IPO9Q96P70 1041 aaKnown RBP5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 FANCD2OSQ96PS1 177 aa5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 ASPSCR1Q9BZE9 553 aa5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 MTFR1LQ9H019 292 aa5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 PICK1Q9NRD5 415 aa5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 RAD18Q9NS91 495 aa5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 GEMIN8Q9NWZ8 242 aaKnown RBP5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 TCEAL9Q9UHQ7 104 aa5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 NSFL1CQ9UNZ2 370 aaKnown RBP5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 PHLDB1Q86UU1 1377 aa5.79□□□□□ -1.48
RNU6-488P-201ENST00000515918 COL17A1Q9UMD9 1497 aaPredicted RBP5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 TSPAN6O43657 245 aa5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 PRC1O43663 620 aa5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 DLX3O60479 287 aa5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 EIF5BO60841 1220 aaKnown RBP5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 CST3P01034 146 aaPredicted RBP5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 POU3F2P20265 443 aaPredicted RBP5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 CAP2P40123 477 aa5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 EPHB1P54762 984 aa5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 MCL1Q07820 350 aa5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 MAP7Q14244 749 aa5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 RNFT1Q5M7Z0 435 aa5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 HP1BP3Q5SSJ5 553 aaPredicted RBP5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 PRAMEF13Q5VWM6 474 aa5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 DMRTC2Q8IXT2 367 aaPredicted RBP5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 CCDC144CPQ8IYA2 1237 aa5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 BVESQ8NE79 360 aa5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 GSTCDQ8NEC7 633 aa5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 RIN3Q8TB24 985 aa5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 UBASH3BQ8TF42 649 aa5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 CYB5D2Q8WUJ1 264 aa5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 SMARCC1Q92922 1105 aaPredicted RBP5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 SCLYQ96I15 445 aa5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 TMPRSS13Q9BYE2 586 aa5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 SLC52A2Q9HAB3 445 aa5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 TNPO3Q9Y5L0 923 aaKnown RBP5.78□□□□□ -1.48
RNU6-488P-201ENST00000515918 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.77□□□□□ -1.49
RNU6-488P-201ENST00000515918 BLACEA4D250 179 aa5.77□□□□□ -1.49
RNU6-488P-201ENST00000515918 SPDYE3A6NKU9 549 aa5.77□□□□□ -1.49
RNU6-488P-201ENST00000515918 DLL1O00548 723 aa5.77□□□□□ -1.49
RNU6-488P-201ENST00000515918 NID1P14543 1247 aa5.77□□□□□ -1.49
RNU6-488P-201ENST00000515918 STRN3Q13033 797 aa5.77□□□□□ -1.49
RNU6-488P-201ENST00000515918 ZNF460Q14592 562 aa5.77□□□□□ -1.49
RNU6-488P-201ENST00000515918 SF1Q15637 639 aaKnown RBP5.77□□□□□ -1.49
RNU6-488P-201ENST00000515918 SEPT7Q16181 437 aaKnown RBP5.77□□□□□ -1.49
RNU6-488P-201ENST00000515918 NBPF12Q5TAG4 269 aaPredicted RBP5.77□□□□□ -1.49
RNU6-488P-201ENST00000515918 PKN3Q6P5Z2 889 aa5.77□□□□□ -1.49
RNU6-488P-201ENST00000515918 BRAPQ7Z569 592 aa5.77□□□□□ -1.49
RNU6-488P-201ENST00000515918 ADAT2Q7Z6V5 191 aaKnown RBP5.77□□□□□ -1.49
RNU6-488P-201ENST00000515918 MAP4K3Q8IVH8 894 aa5.77□□□□□ -1.49
RNU6-488P-201ENST00000515918 PMM1Q92871 262 aa5.77□□□□□ -1.49
RNU6-488P-201ENST00000515918 ACDQ96AP0 544 aa5.77□□□□□ -1.49
RNU6-488P-201ENST00000515918 VWCEQ96DN2 955 aa5.77□□□□□ -1.49
RNU6-488P-201ENST00000515918 PRDM6Q9NQX0 595 aa5.77□□□□□ -1.49
RNU6-488P-201ENST00000515918 SFMBT1Q9UHJ3 866 aa5.77□□□□□ -1.49
RNU6-488P-201ENST00000515918 EMC9Q9Y3B6 208 aa5.77□□□□□ -1.49
RNU6-488P-201ENST00000515918 SHTN1A0MZ66 631 aa5.76□□□□□ -1.49
RNU6-488P-201ENST00000515918 C11orf95C9JLR9 678 aaPredicted RBP5.76□□□□□ -1.49
RNU6-488P-201ENST00000515918 CD247P20963 164 aa5.76□□□□□ -1.49
RNU6-488P-201ENST00000515918 MTMR1Q13613 665 aa5.76□□□□□ -1.49
RNU6-488P-201ENST00000515918 TTLL4Q14679 1199 aa5.76□□□□□ -1.49
RNU6-488P-201ENST00000515918 LAPTM4AQ15012 233 aa5.76□□□□□ -1.49
RNU6-488P-201ENST00000515918 NTRK3Q16288 839 aa5.76□□□□□ -1.49
RNU6-488P-201ENST00000515918 WWC2Q6AWC2 1192 aa5.76□□□□□ -1.49
RNU6-488P-201ENST00000515918 CHSY3Q70JA7 882 aa5.76□□□□□ -1.49
RNU6-488P-201ENST00000515918 PPM1KQ8N3J5 372 aa5.76□□□□□ -1.49
RNU6-488P-201ENST00000515918 ISL2Q96A47 359 aa5.76□□□□□ -1.49
RNU6-488P-201ENST00000515918 RCC1LQ96I51 464 aaKnown RBP5.76□□□□□ -1.49
RNU6-488P-201ENST00000515918 TRIM8Q9BZR9 551 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms